RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CEP126Q9P2H0 1117 aa13.45□□□□□ -0.26
HDAC6-211ENST00000443563 HACL1Q9UJ83 578 aa13.45□□□□□ -0.26
HDAC6-211ENST00000443563 KIF3CO14782 793 aa13.44□□□□□ -0.26
HDAC6-211ENST00000443563 IFIT1P09914 478 aaKnown RBP13.44□□□□□ -0.26
HDAC6-211ENST00000443563 RPS12P25398 132 aaKnown RBP13.44□□□□□ -0.26
HDAC6-211ENST00000443563 G3BP1Q13283 466 aaKnown RBP eCLIP13.44□□□□□ -0.268e-6■□□□□ 9
HDAC6-211ENST00000443563 CAVIN4Q5BKX8 364 aa13.44□□□□□ -0.26
HDAC6-211ENST00000443563 ATG9AQ7Z3C6 839 aa13.44□□□□□ -0.26
HDAC6-211ENST00000443563 VGLL2Q8N8G2 317 aa13.44□□□□□ -0.26
HDAC6-211ENST00000443563 SSH3Q8TE77 659 aa13.44□□□□□ -0.26
HDAC6-211ENST00000443563 C1orf115Q9H7X2 142 aa13.44□□□□□ -0.26
HDAC6-211ENST00000443563 ZBTB40Q9NUA8 1239 aa13.44□□□□□ -0.26
HDAC6-211ENST00000443563 PA2G4Q9UQ80 394 aaKnown RBP13.44□□□□□ -0.26
HDAC6-211ENST00000443563 SCN9AQ15858 1988 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 PNMA6EA0A0J9YXQ4 647 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 USP17L3A6NCW0 530 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 USP17L4A6NCW7 530 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 WTIPA6NIX2 430 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-211ENST00000443563 PSMD14O00487 310 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 TOMM70O94826 608 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 SLC5A1P13866 664 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 POLA2Q14181 598 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 C20orf194Q5TEA3 1177 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 CEP85Q6P2H3 762 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 USP17L1Q7RTZ2 530 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 PNMA8AQ86V59 439 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-211ENST00000443563 RPAP2Q8IXW5 612 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-211ENST00000443563 LPIN2Q92539 896 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 DPF2Q92785 391 aa13.43□□□□□ -0.26
HDAC6-211ENST00000443563 IRS2Q9Y4H2 1338 aa13.42□□□□□ -0.26
HDAC6-211ENST00000443563 ZNF609O15014 1411 aa13.42□□□□□ -0.26
HDAC6-211ENST00000443563 POTECB2RU33 542 aa13.42□□□□□ -0.26
HDAC6-211ENST00000443563 SNAP23O00161 211 aa13.42□□□□□ -0.26
HDAC6-211ENST00000443563 HMMRO75330 724 aa13.42□□□□□ -0.26
HDAC6-211ENST00000443563 VIL1P09327 827 aaKnown RBP13.42□□□□□ -0.26
HDAC6-211ENST00000443563 HIBADHP31937 336 aaKnown RBP13.42□□□□□ -0.26
HDAC6-211ENST00000443563 GMPSP49915 693 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-211ENST00000443563 TXNRD3Q86VQ6 643 aa13.42□□□□□ -0.26
HDAC6-211ENST00000443563 VPS37DQ86XT2 251 aa13.42□□□□□ -0.26
HDAC6-211ENST00000443563 CD209Q9NNX6 404 aa13.42□□□□□ -0.26
HDAC6-211ENST00000443563 AKAP2Q9Y2D5 859 aa13.42□□□□□ -0.26
HDAC6-211ENST00000443563 MYO3BQ8WXR4 1341 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 H7C1D1 291 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 IL1R1P14778 569 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 FGFR2P21802 821 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 KLRK1P26718 216 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 EPHX2P34913 555 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 MMP14P50281 582 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 SCNN1DP51172 638 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-211ENST00000443563 ATP2B3Q16720 1220 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 STRIP1Q5VSL9 837 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 RSBN1LQ6PCB5 846 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-211ENST00000443563 AGBL3Q8NEM8 1001 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 RBM46Q8TBY0 533 aaKnown RBP13.41□□□□□ -0.26
HDAC6-211ENST00000443563 TAF1DQ9H5J8 278 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-211ENST00000443563 ADARB2Q9NS39 739 aaKnown RBP13.41□□□□□ -0.26
HDAC6-211ENST00000443563 GPRC5DQ9NZD1 345 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 ARAP2Q8WZ64 1704 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 MYH13Q9UKX3 1938 aa13.41□□□□□ -0.26
HDAC6-211ENST00000443563 SURF6O75683 361 aaKnown RBP13.4□□□□□ -0.26
HDAC6-211ENST00000443563 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
HDAC6-211ENST00000443563 TTLL5Q6EMB2 1281 aa13.4□□□□□ -0.26
HDAC6-211ENST00000443563 USP50Q70EL3 339 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-211ENST00000443563 FBXW7Q969H0 707 aa13.4□□□□□ -0.26
HDAC6-211ENST00000443563 KCNQ5Q9NR82 932 aa13.4□□□□□ -0.26
HDAC6-211ENST00000443563 ZNF646O15015 1829 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-211ENST00000443563 FRAT2O75474 233 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-211ENST00000443563 GYG1P46976 350 aa13.39□□□□□ -0.27
HDAC6-211ENST00000443563 FSTL1Q12841 308 aa13.39□□□□□ -0.27
HDAC6-211ENST00000443563 FBXO33Q7Z6M2 555 aa13.39□□□□□ -0.27
HDAC6-211ENST00000443563 ERC1Q8IUD2 1116 aa13.39□□□□□ -0.27
HDAC6-211ENST00000443563 FAM84BQ96KN1 310 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-211ENST00000443563 CNOT7Q9UIV1 285 aaKnown RBP13.39□□□□□ -0.27
HDAC6-211ENST00000443563 NOP58Q9Y2X3 529 aaKnown RBP13.39□□□□□ -0.27
HDAC6-211ENST00000443563 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-211ENST00000443563 SASH1O94885 1247 aa13.38□□□□□ -0.27
HDAC6-211ENST00000443563 EPS15P42566 896 aa13.38□□□□□ -0.27
HDAC6-211ENST00000443563 C1QTNF8P60827 252 aa13.38□□□□□ -0.27
HDAC6-211ENST00000443563 FKBP1AP62942 108 aaKnown RBP13.38□□□□□ -0.27
HDAC6-211ENST00000443563 GTF2IP78347 998 aa13.38□□□□□ -0.27
HDAC6-211ENST00000443563 TFCP2Q12800 502 aa13.38□□□□□ -0.27
HDAC6-211ENST00000443563 AAMPQ13685 434 aa13.38□□□□□ -0.27
HDAC6-211ENST00000443563 EAPPQ56P03 285 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-211ENST00000443563 DACT2Q5SW24 774 aa13.38□□□□□ -0.27
HDAC6-211ENST00000443563 LDHDQ86WU2 507 aa13.38□□□□□ -0.27
HDAC6-211ENST00000443563 SMC1BQ8NDV3 1235 aa13.38□□□□□ -0.27
HDAC6-211ENST00000443563 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
HDAC6-211ENST00000443563 GPR108Q9NPR9 543 aa13.38□□□□□ -0.27
HDAC6-211ENST00000443563 GNL3LQ9NVN8 582 aaKnown RBP13.38□□□□□ -0.27
HDAC6-211ENST00000443563 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
HDAC6-211ENST00000443563 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
HDAC6-211ENST00000443563 OGFOD1Q8N543 542 aa13.37□□□□□ -0.27
HDAC6-211ENST00000443563 HDAC9Q9UKV0 1011 aa13.37□□□□□ -0.27
HDAC6-211ENST00000443563 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
HDAC6-211ENST00000443563 ADAMTSL1Q8N6G6 1762 aa13.37□□□□□ -0.27
HDAC6-211ENST00000443563 FAM205AQ6ZU69 1335 aa13.37□□□□□ -0.27
HDAC6-211ENST00000443563 A0A1B0GUL7 405 aa13.36□□□□□ -0.27
HDAC6-211ENST00000443563 USP17L8P0C7I0 530 aa13.36□□□□□ -0.27
HDAC6-211ENST00000443563 BCAMP50895 628 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms