RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 SPATA31A6Q5VVP1 1343 aa9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 ZBED9Q6R2W3 1325 aa9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 TMEM229AB2RXF0 380 aa9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 DKK1O94907 266 aa9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 CENPBP07199 599 aaPredicted RBP9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 U2AF1L5P0DN76 240 aaPredicted RBP9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 SCNN1DP51172 638 aa9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 U2AF1Q01081 240 aaKnown RBP eCLIP9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 NCAPD2Q15021 1401 aa9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 NUTM2GQ5VZR2 741 aa9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 Q6ZVU0 165 aa9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 TSEN2Q8NCE0 465 aaKnown RBP9.35□□□□□ -0.91
R3HDM1-210ENST00000443537 IGSF1Q8N6C5 1336 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 MAPK8IP3Q9UPT6 1336 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 A0A1W2PRU2 124 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 MEN1O00255 615 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 LGR5O75473 907 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 UPP2O95045 317 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 INHAP05111 366 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 PTGIRP43119 386 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 PIP4K2BP78356 416 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 SWI5Q1ZZU3 235 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 PKDCCQ504Y2 493 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 B4GALNT3Q6L9W6 998 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 DDX17Q92841 729 aaKnown RBP9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 RUNDC1Q96C34 613 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 NLRP3Q96P20 1036 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 ZNF395Q9H8N7 513 aaPredicted RBP9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 ADAMTS8Q9UP79 889 aa9.34□□□□□ -0.91
R3HDM1-210ENST00000443537 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.34□□□□□ -0.92
R3HDM1-210ENST00000443537 PARP4Q9UKK3 1724 aaKnown RBP9.34□□□□□ -0.92
R3HDM1-210ENST00000443537 DLG5Q8TDM6 1919 aa9.33□□□□□ -0.92
R3HDM1-210ENST00000443537 PLCH1Q4KWH8 1693 aa9.33□□□□□ -0.92
R3HDM1-210ENST00000443537 U2SURPO15042 1029 aaKnown RBP9.33□□□□□ -0.92
R3HDM1-210ENST00000443537 PDE3BQ13370 1112 aa9.33□□□□□ -0.92
R3HDM1-210ENST00000443537 EIF4A2Q14240 407 aaKnown RBP9.33□□□□□ -0.92
R3HDM1-210ENST00000443537 KCTD17Q8N5Z5 321 aa9.33□□□□□ -0.92
R3HDM1-210ENST00000443537 PRDM11Q9NQV5 511 aa9.33□□□□□ -0.92
R3HDM1-210ENST00000443537 KIAA0232Q92628 1395 aa9.33□□□□□ -0.92
R3HDM1-210ENST00000443537 RGPD2P0DJD1 1756 aa9.32□□□□□ -0.92
R3HDM1-210ENST00000443537 M0R2N6 131 aa9.32□□□□□ -0.92
R3HDM1-210ENST00000443537 PRMT3O60678 531 aa9.32□□□□□ -0.92
R3HDM1-210ENST00000443537 HNRNPUQ00839 825 aaKnown RBP eCLIP9.32□□□□□ -0.92
R3HDM1-210ENST00000443537 LMOD3Q0VAK6 560 aa9.32□□□□□ -0.92
R3HDM1-210ENST00000443537 HSP90AB2PQ58FF8 381 aa9.32□□□□□ -0.92
R3HDM1-210ENST00000443537 MEIOBQ8N635 442 aa9.32□□□□□ -0.92
R3HDM1-210ENST00000443537 CNKSR1Q969H4 720 aa9.32□□□□□ -0.92
R3HDM1-210ENST00000443537 TSEN34Q9BSV6 310 aaKnown RBP9.32□□□□□ -0.92
R3HDM1-210ENST00000443537 COL5A2P05997 1499 aaPredicted RBP9.32□□□□□ -0.92
R3HDM1-210ENST00000443537 NRAPQ86VF7 1730 aa9.31□□□□□ -0.92
R3HDM1-210ENST00000443537 ZBTB7CA1YPR0 619 aa9.31□□□□□ -0.92
R3HDM1-210ENST00000443537 NRG2O14511 850 aaPredicted RBP9.31□□□□□ -0.92
R3HDM1-210ENST00000443537 ATP2B4P23634 1241 aa9.31□□□□□ -0.92
R3HDM1-210ENST00000443537 CCDC27Q2M243 656 aa9.31□□□□□ -0.92
R3HDM1-210ENST00000443537 TNS4Q8IZW8 715 aa9.31□□□□□ -0.92
R3HDM1-210ENST00000443537 CLP1Q92989 425 aaKnown RBP9.31□□□□□ -0.92
R3HDM1-210ENST00000443537 PRIMPOLQ96LW4 560 aa9.31□□□□□ -0.92
R3HDM1-210ENST00000443537 WNK3Q9BYP7 1800 aa9.31□□□□□ -0.92
R3HDM1-210ENST00000443537 BRD1O95696 1058 aa9.3□□□□□ -0.92
R3HDM1-210ENST00000443537 IL2RAP01589 272 aa9.3□□□□□ -0.92
R3HDM1-210ENST00000443537 CALD1Q05682 793 aaKnown RBP9.3□□□□□ -0.92
R3HDM1-210ENST00000443537 CLN3Q13286 438 aa9.3□□□□□ -0.92
R3HDM1-210ENST00000443537 TLR1Q15399 786 aa9.3□□□□□ -0.92
R3HDM1-210ENST00000443537 KDF1Q8NAX2 398 aaPredicted RBP9.3□□□□□ -0.92
R3HDM1-210ENST00000443537 XAGE2Q96GT9 111 aa9.3□□□□□ -0.92
R3HDM1-210ENST00000443537 ESYT1Q9BSJ8 1104 aa9.3□□□□□ -0.92
R3HDM1-210ENST00000443537 VIRMAQ69YN4 1812 aaKnown RBP9.3□□□□□ -0.92
R3HDM1-210ENST00000443537 PKD1L3Q7Z443 1732 aa9.3□□□□□ -0.92
R3HDM1-210ENST00000443537 WDR17Q8IZU2 1322 aa9.3□□□□□ -0.92
R3HDM1-210ENST00000443537 DGAT1O75907 488 aa9.29□□□□□ -0.92
R3HDM1-210ENST00000443537 BMP2P12643 396 aa9.29□□□□□ -0.92
R3HDM1-210ENST00000443537 FBLN1P23142 703 aa9.29□□□□□ -0.92
R3HDM1-210ENST00000443537 GTF2E1P29083 439 aaPredicted RBP9.29□□□□□ -0.92
R3HDM1-210ENST00000443537 SMTNP53814 917 aa9.29□□□□□ -0.92
R3HDM1-210ENST00000443537 ZC3H6P61129 1189 aaKnown RBP9.29□□□□□ -0.92
R3HDM1-210ENST00000443537 C6orf118Q5T5N4 469 aa9.29□□□□□ -0.92
R3HDM1-210ENST00000443537 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
R3HDM1-210ENST00000443537 GAS2L2Q8NHY3 880 aa9.29□□□□□ -0.92
R3HDM1-210ENST00000443537 ANKRD24Q8TF21 1146 aa9.29□□□□□ -0.92
R3HDM1-210ENST00000443537 PLEKHF1Q96S99 279 aa9.29□□□□□ -0.92
R3HDM1-210ENST00000443537 A6NJY4 79 aa9.28□□□□□ -0.92
R3HDM1-210ENST00000443537 PRKAR2BP31323 418 aa9.28□□□□□ -0.92
R3HDM1-210ENST00000443537 AMOTQ4VCS5 1084 aa9.28□□□□□ -0.92
R3HDM1-210ENST00000443537 SULT6B1Q6IMI4 303 aa9.28□□□□□ -0.92
R3HDM1-210ENST00000443537 SLC4A9Q96Q91 983 aa9.28□□□□□ -0.92
R3HDM1-210ENST00000443537 POLMQ9NP87 494 aaPredicted RBP9.28□□□□□ -0.92
R3HDM1-210ENST00000443537 OVOS2A0A0G2JMS6 1433 aa9.28□□□□□ -0.92
R3HDM1-210ENST00000443537 CRB1P82279 1406 aa9.28□□□□□ -0.92
R3HDM1-210ENST00000443537 SLIT2O94813 1529 aa9.27□□□□□ -0.93
R3HDM1-210ENST00000443537 HTATSF1O43719 755 aaKnown RBP9.27□□□□□ -0.93
R3HDM1-210ENST00000443537 CENPCQ03188 943 aa9.27□□□□□ -0.93
R3HDM1-210ENST00000443537 LAPTM4AQ15012 233 aa9.27□□□□□ -0.93
R3HDM1-210ENST00000443537 SLC27A3Q5K4L6 730 aa9.27□□□□□ -0.93
R3HDM1-210ENST00000443537 TCP11L2Q8N4U5 519 aa9.27□□□□□ -0.93
R3HDM1-210ENST00000443537 SCG3Q8WXD2 468 aaKnown RBP9.27□□□□□ -0.93
R3HDM1-210ENST00000443537 YTHDC1Q96MU7 727 aaKnown RBP9.27□□□□□ -0.93
R3HDM1-210ENST00000443537 INSM2Q96T92 566 aaPredicted RBP9.27□□□□□ -0.93
R3HDM1-210ENST00000443537 PATL2C9JE40 543 aaKnown RBP9.26□□□□□ -0.93
R3HDM1-210ENST00000443537 APAF1O14727 1248 aa9.26□□□□□ -0.93
R3HDM1-210ENST00000443537 AXIN1O15169 862 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms