RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 CCDC85AQ96PX6 553 aaPredicted RBP17.64■□□□□ 0.41
PTPRE-203ENST00000442830 GMLQ99445 158 aa17.64■□□□□ 0.41
PTPRE-203ENST00000442830 MINPP1Q9UNW1 487 aa17.64■□□□□ 0.41
PTPRE-203ENST00000442830 FAM155AB1AL88 458 aaPredicted RBP17.63■□□□□ 0.41
PTPRE-203ENST00000442830 H7C1W4 665 aa17.63■□□□□ 0.41
PTPRE-203ENST00000442830 SLC10A3P09131 477 aa17.63■□□□□ 0.41
PTPRE-203ENST00000442830 STRIP1Q5VSL9 837 aa17.63■□□□□ 0.41
PTPRE-203ENST00000442830 GREM2Q9H772 168 aa17.63■□□□□ 0.41
PTPRE-203ENST00000442830 FLIIQ13045 1269 aa17.62■□□□□ 0.41
PTPRE-203ENST00000442830 ANGEL2Q5VTE6 544 aaKnown RBP17.62■□□□□ 0.41
PTPRE-203ENST00000442830 UBE3BQ7Z3V4 1068 aa17.62■□□□□ 0.41
PTPRE-203ENST00000442830 JARID2Q92833 1246 aaPredicted RBP17.62■□□□□ 0.41
PTPRE-203ENST00000442830 MPHOSPH8Q99549 860 aa17.62■□□□□ 0.41
PTPRE-203ENST00000442830 TSKSQ9UJT2 592 aa17.62■□□□□ 0.41
PTPRE-203ENST00000442830 ZNF646O15015 1829 aaPredicted RBP17.61■□□□□ 0.41
PTPRE-203ENST00000442830 CCDC85CA6NKD9 419 aa17.61■□□□□ 0.41
PTPRE-203ENST00000442830 NF2P35240 595 aa17.61■□□□□ 0.41
PTPRE-203ENST00000442830 FKBP5Q13451 457 aaPredicted RBP17.61■□□□□ 0.41
PTPRE-203ENST00000442830 GCKRQ14397 625 aa17.61■□□□□ 0.41
PTPRE-203ENST00000442830 CWF19L2Q2TBE0 894 aaKnown RBP17.61■□□□□ 0.41
PTPRE-203ENST00000442830 WDR63Q8IWG1 891 aa17.61■□□□□ 0.41
PTPRE-203ENST00000442830 LINS1Q8NG48 757 aa17.61■□□□□ 0.41
PTPRE-203ENST00000442830 DNAAF4Q8WXU2 420 aa17.61■□□□□ 0.41
PTPRE-203ENST00000442830 HDAC9Q9UKV0 1011 aa17.61■□□□□ 0.41
PTPRE-203ENST00000442830 RGS19P49795 217 aa17.6■□□□□ 0.41
PTPRE-203ENST00000442830 KIF23Q02241 960 aaPredicted RBP17.6■□□□□ 0.41
PTPRE-203ENST00000442830 MCOLN1Q9GZU1 580 aa17.6■□□□□ 0.41
PTPRE-203ENST00000442830 ZNF804BA4D1E1 1349 aa17.59■□□□□ 0.41
PTPRE-203ENST00000442830 ITGA6P23229 1130 aa17.59■□□□□ 0.41
PTPRE-203ENST00000442830 KCNJ4P48050 445 aa17.59■□□□□ 0.41
PTPRE-203ENST00000442830 DGKZQ13574 1117 aa17.59■□□□□ 0.41
PTPRE-203ENST00000442830 DACT2Q5SW24 774 aa17.59■□□□□ 0.41
PTPRE-203ENST00000442830 COL1A1P02452 1464 aaPredicted RBP17.58■□□□□ 0.41
PTPRE-203ENST00000442830 FANCIQ9NVI1 1328 aa17.58■□□□□ 0.4
PTPRE-203ENST00000442830 CSF1RP07333 972 aa17.58■□□□□ 0.4
PTPRE-203ENST00000442830 MLLT1Q03111 559 aaPredicted RBP17.58■□□□□ 0.4
PTPRE-203ENST00000442830 APOBEC3FQ8IUX4 373 aaKnown RBP17.58■□□□□ 0.4
PTPRE-203ENST00000442830 ECM29Q5VYK3 1845 aa17.57■□□□□ 0.4
PTPRE-203ENST00000442830 ANKRD18BA2A2Z9 1011 aa17.57■□□□□ 0.4
PTPRE-203ENST00000442830 ANP32CO43423 234 aa17.57■□□□□ 0.4
PTPRE-203ENST00000442830 ZEB1P37275 1124 aaPredicted RBP17.57■□□□□ 0.4
PTPRE-203ENST00000442830 RASAL3Q86YV0 1011 aa17.57■□□□□ 0.4
PTPRE-203ENST00000442830 MRS2Q9HD23 443 aa17.57■□□□□ 0.4
PTPRE-203ENST00000442830 ASTN2O75129 1339 aaPredicted RBP17.56■□□□□ 0.4
PTPRE-203ENST00000442830 CASP7P55210 303 aa17.56■□□□□ 0.4
PTPRE-203ENST00000442830 FAM161AQ3B820 660 aa17.56■□□□□ 0.4
PTPRE-203ENST00000442830 TTLL5Q6EMB2 1281 aa17.56■□□□□ 0.4
PTPRE-203ENST00000442830 DLK2Q6UY11 383 aa17.56■□□□□ 0.4
PTPRE-203ENST00000442830 G2E3Q7L622 706 aa17.56■□□□□ 0.4
PTPRE-203ENST00000442830 FBXW7Q969H0 707 aa17.56■□□□□ 0.4
PTPRE-203ENST00000442830 ZIC5Q96T25 663 aa17.56■□□□□ 0.4
PTPRE-203ENST00000442830 RNF186Q9NXI6 227 aa17.56■□□□□ 0.4
PTPRE-203ENST00000442830 WNT10BO00744 389 aa17.55■□□□□ 0.4
PTPRE-203ENST00000442830 IFIT5Q13325 482 aaKnown RBP17.55■□□□□ 0.4
PTPRE-203ENST00000442830 C15orf52Q6ZUT6 534 aaKnown RBP17.55■□□□□ 0.4
PTPRE-203ENST00000442830 CSRNP1Q96S65 589 aa17.55■□□□□ 0.4
PTPRE-203ENST00000442830 A0A1B0GUL6 1792 aa17.55■□□□□ 0.4
PTPRE-203ENST00000442830 VAMP4O75379 141 aa17.54■□□□□ 0.4
PTPRE-203ENST00000442830 TRPA1O75762 1119 aa17.54■□□□□ 0.4
PTPRE-203ENST00000442830 CHRNDQ07001 517 aa17.54■□□□□ 0.4
PTPRE-203ENST00000442830 ARMC9Q7Z3E5 817 aa17.54■□□□□ 0.4
PTPRE-203ENST00000442830 TTLL12Q14166 644 aaPredicted RBP17.53■□□□□ 0.4
PTPRE-203ENST00000442830 NBPF9Q3BBW0 867 aa17.53■□□□□ 0.4
PTPRE-203ENST00000442830 ZNF804AQ7Z570 1209 aa17.53■□□□□ 0.4
PTPRE-203ENST00000442830 FKBP1AP62942 108 aaKnown RBP17.52■□□□□ 0.4
PTPRE-203ENST00000442830 SREBF2Q12772 1141 aa17.52■□□□□ 0.4
PTPRE-203ENST00000442830 PKN2Q16513 984 aaKnown RBP17.52■□□□□ 0.4
PTPRE-203ENST00000442830 CCDC184Q52MB2 194 aa17.52■□□□□ 0.4
PTPRE-203ENST00000442830 NOM1Q5C9Z4 860 aaKnown RBP17.52■□□□□ 0.4
PTPRE-203ENST00000442830 PPP2R3BQ9Y5P8 575 aa17.52■□□□□ 0.4
PTPRE-203ENST00000442830 MYO1BO43795 1136 aa17.51■□□□□ 0.39
PTPRE-203ENST00000442830 GTF2IP78347 998 aa17.51■□□□□ 0.39
PTPRE-203ENST00000442830 CCDC57Q2TAC2 916 aa17.51■□□□□ 0.39
PTPRE-203ENST00000442830 CTU1Q7Z7A3 348 aaKnown RBP17.51■□□□□ 0.39
PTPRE-203ENST00000442830 MTMR14Q8NCE2 650 aa17.51■□□□□ 0.39
PTPRE-203ENST00000442830 CD209Q9NNX6 404 aa17.51■□□□□ 0.39
PTPRE-203ENST00000442830 UNCXA6NJT0 531 aa17.5■□□□□ 0.39
PTPRE-203ENST00000442830 EXOSC9Q06265 439 aaKnown RBP17.5■□□□□ 0.39
PTPRE-203ENST00000442830 DLGAP5Q15398 846 aa17.5■□□□□ 0.39
PTPRE-203ENST00000442830 TAF7LQ5H9L4 462 aa17.5■□□□□ 0.39
PTPRE-203ENST00000442830 TXNRD3Q86VQ6 643 aa17.5■□□□□ 0.39
PTPRE-203ENST00000442830 KIAA0825Q8IV33 1275 aa17.5■□□□□ 0.39
PTPRE-203ENST00000442830 CHMP3Q9Y3E7 222 aa17.5■□□□□ 0.39
PTPRE-203ENST00000442830 WTIPA6NIX2 430 aaPredicted RBP17.49■□□□□ 0.39
PTPRE-203ENST00000442830 ALDH1L1O75891 902 aa17.49■□□□□ 0.39
PTPRE-203ENST00000442830 TM4SF4P48230 202 aa17.49■□□□□ 0.39
PTPRE-203ENST00000442830 BEND3Q5T5X7 828 aa17.49■□□□□ 0.39
PTPRE-203ENST00000442830 ZBED3Q96IU2 234 aaPredicted RBP17.49■□□□□ 0.39
PTPRE-203ENST00000442830 LAMB1P07942 1786 aa17.48■□□□□ 0.39
PTPRE-203ENST00000442830 UBE2Q2LH0YL09 131 aa17.48■□□□□ 0.39
PTPRE-203ENST00000442830 GRM8O00222 908 aa17.48■□□□□ 0.39
PTPRE-203ENST00000442830 SASH1O94885 1247 aa17.48■□□□□ 0.39
PTPRE-203ENST00000442830 ALDH1A1P00352 501 aa17.48■□□□□ 0.39
PTPRE-203ENST00000442830 IL1R1P14778 569 aa17.48■□□□□ 0.39
PTPRE-203ENST00000442830 FOXO4P98177 505 aa17.48■□□□□ 0.39
PTPRE-203ENST00000442830 MXD3Q9BW11 206 aa17.48■□□□□ 0.39
PTPRE-203ENST00000442830 C9orf78Q9NZ63 289 aaPredicted RBP17.48■□□□□ 0.39
PTPRE-203ENST00000442830 PDE4DIPQ5VU43 2346 aa17.48■□□□□ 0.39
PTPRE-203ENST00000442830 PPP1R12BO60237 982 aaPredicted RBP17.47■□□□□ 0.39
PTPRE-203ENST00000442830 INHBEP58166 350 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms