RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 MSX1P28360 303 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 RNF187Q5TA31 235 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 ZNF787Q6DD87 383 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 TPTE2Q6XPS3 522 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 DTHD1Q6ZMT9 781 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 LINC00528Q8N1L1 170 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 RNF217Q8TC41 542 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 KANSL2Q9H9L4 492 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 SUPT16HQ9Y5B9 1047 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 A0A1B0GTH6 734 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 TMEM238LA0A1B0GVL6 79 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 SASH3O75995 380 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 PCNX4Q63HM2 1172 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 CCDC81Q6ZN84 652 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 FILIP1Q7Z7B0 1213 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 GOLM1Q8NBJ4 401 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 ANKRD24Q8TF21 1146 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 CPLX3Q8WVH0 158 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 LIN7BQ9HAP6 207 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 IFT57Q9NWB7 429 aa5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 NOP58Q9Y2X3 529 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-207ENST00000441725 RLBP1P12271 317 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 RHOQP17081 205 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 IBSPP21815 317 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 TARSP26639 723 aaKnown RBP5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 LIG3P49916 1009 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 APOBRQ0VD83 1088 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 COL9A2Q14055 689 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 WDR44Q5JSH3 913 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 SV2BQ7L1I2 683 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 KRT25Q7Z3Z0 450 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 TCF12Q99081 682 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 TIMMDC1Q9NPL8 285 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 PRKAG3Q9UGI9 489 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 CAPN5O15484 640 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 MMP20O60882 483 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 ACPPP15309 386 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 CAMK2GQ13555 558 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 LYSMD3Q7Z3D4 306 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 SHDQ96IW2 340 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 CNTNAP3BQ96NU0 1288 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 CNTNAP3Q9BZ76 1288 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 GPAMQ9HCL2 828 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 ATP13A2Q9NQ11 1180 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 KLHL42Q9P2K6 505 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 PPT2Q9UMR5 302 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 COL4A3BPQ9Y5P4 624 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 GJA3Q9Y6H8 435 aa5.76□□□□□ -1.49
CDC42BPA-207ENST00000441725 ANAPC15P60006 121 aa5.75□□□□□ -1.49
CDC42BPA-207ENST00000441725 SNAP47Q5SQN1 464 aa5.75□□□□□ -1.49
CDC42BPA-207ENST00000441725 NOL8Q76FK4 1167 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-207ENST00000441725 CELF2-AS1Q8N7Q2 184 aa5.75□□□□□ -1.49
CDC42BPA-207ENST00000441725 FAM169BQ8N8A8 192 aa5.75□□□□□ -1.49
CDC42BPA-207ENST00000441725 OR13H1Q8NG92 308 aa5.75□□□□□ -1.49
CDC42BPA-207ENST00000441725 POLR3GLQ9BT43 218 aa5.75□□□□□ -1.49
CDC42BPA-207ENST00000441725 SRRTQ9BXP5 876 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-207ENST00000441725 RUBCNLQ9H714 662 aa5.75□□□□□ -1.49
CDC42BPA-207ENST00000441725 C11orf16Q9NQ32 467 aa5.75□□□□□ -1.49
CDC42BPA-207ENST00000441725 PHF20L1A8MW92 1017 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 SMAD7O15105 426 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 PLEKHG4Q58EX7 1191 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 SH3TC2Q8TF17 1288 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 ZKSCAN3Q9BRR0 538 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 BRINP2Q9C0B6 783 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 GMPR2Q9P2T1 348 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 R3HCC1Q9Y3T6 440 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 ENC1O14682 589 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 TRPA1O75762 1119 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 TFE3P19532 575 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 GRIA4P48058 902 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 LMNB2Q03252 620 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 GRIN2CQ14957 1233 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 CCNJLQ8IV13 435 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 ZCRB1Q8TBF4 217 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 NKD1Q969G9 470 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 CRISPLD1Q9H336 500 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 PCDH12Q9NPG4 1184 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 FANCLQ9NW38 375 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 MSRB2Q9Y3D2 182 aa5.74□□□□□ -1.49
CDC42BPA-207ENST00000441725 METTL12A8MUP2 240 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 CHMP4BP1P59074 171 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 COL13A1Q5TAT6 717 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 TTBK2Q6IQ55 1244 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 SLITRK4Q8IW52 837 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 LILRB2Q8N423 598 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 OSMRQ99650 979 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 ZFATQ9P243 1243 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 PAGE1O75459 146 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 UPP2O95045 317 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 BMP2P12643 396 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 SEZ6Q53EL9 994 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 C6orf118Q5T5N4 469 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 AGMOQ6ZNB7 445 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 FAM196AQ6ZSG2 479 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 LRP10Q7Z4F1 713 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 FBXO27Q8NI29 283 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 DNAJC7Q99615 494 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 GSX2Q9BZM3 304 aa5.73□□□□□ -1.49
CDC42BPA-207ENST00000441725 DNAJC6O75061 913 aa5.72□□□□□ -1.49
CDC42BPA-207ENST00000441725 CDC45O75419 566 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms