RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
SCAP-207ENST00000441517 DENND2AQ9ULE3 1009 aa17.54■□□□□ 0.4
SCAP-207ENST00000441517 NCOA3Q9Y6Q9 1424 aa17.53■□□□□ 0.4
SCAP-207ENST00000441517 USP31Q70CQ4 1352 aa17.53■□□□□ 0.4
SCAP-207ENST00000441517 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
SCAP-207ENST00000441517 HOXB7P09629 217 aa17.53■□□□□ 0.4
SCAP-207ENST00000441517 ZSWIM4Q9H7M6 989 aa17.53■□□□□ 0.4
SCAP-207ENST00000441517 SALL3Q9BXA9 1300 aa17.53■□□□□ 0.4
SCAP-207ENST00000441517 CTDSPL2Q05D32 466 aa17.53■□□□□ 0.4
SCAP-207ENST00000441517 OSBP2Q969R2 916 aa17.53■□□□□ 0.4
SCAP-207ENST00000441517 ATP5JP18859 108 aa17.52■□□□□ 0.4
SCAP-207ENST00000441517 ITGA6P23229 1130 aa17.52■□□□□ 0.4
SCAP-207ENST00000441517 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.41e-6■■■■□ 20.3
SCAP-207ENST00000441517 DDX19AQ9NUU7 478 aaKnown RBP17.52■□□□□ 0.4
SCAP-207ENST00000441517 HMG20BQ9P0W2 317 aa17.52■□□□□ 0.4
SCAP-207ENST00000441517 GOLGA8FQ08AF8 430 aa17.52■□□□□ 0.4
SCAP-207ENST00000441517 GOLGA8DPQ0D2H9 430 aa17.52■□□□□ 0.4
SCAP-207ENST00000441517 SCARF1Q14162 830 aa17.52■□□□□ 0.4
SCAP-207ENST00000441517 TMEM67Q5HYA8 995 aa17.52■□□□□ 0.4
SCAP-207ENST00000441517 CDC42BPGQ6DT37 1551 aa17.52■□□□□ 0.4
SCAP-207ENST00000441517 NBPF26B4DH59 902 aa17.52■□□□□ 0.39
SCAP-207ENST00000441517 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.39
SCAP-207ENST00000441517 NBPF14Q5TI25 921 aa17.52■□□□□ 0.39
SCAP-207ENST00000441517 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.39
SCAP-207ENST00000441517 CADPS2Q86UW7 1296 aa17.52■□□□□ 0.39
SCAP-207ENST00000441517 PDCL2Q8N4E4 241 aa17.52■□□□□ 0.39
SCAP-207ENST00000441517 NBPF15Q8N660 670 aa17.52■□□□□ 0.39
SCAP-207ENST00000441517 DLC1Q96QB1 1528 aa17.52■□□□□ 0.39
SCAP-207ENST00000441517 ANKRD18BA2A2Z9 1011 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 GPAA1O43292 621 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 FGAP02671 866 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 SKILP12757 684 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 SAFBQ15424 915 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCAP-207ENST00000441517 SKIDA1Q1XH10 827 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 GTF3C6Q969F1 213 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 ALG1Q9BT22 464 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 RIMS1Q86UR5 1692 aaKnown RBP17.51■□□□□ 0.39
SCAP-207ENST00000441517 RPAP1Q9BWH6 1393 aaPredicted RBP17.51■□□□□ 0.39
SCAP-207ENST00000441517 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
SCAP-207ENST00000441517 RIOK3O14730 519 aaKnown RBP17.51■□□□□ 0.39
SCAP-207ENST00000441517 METAP2P50579 478 aaKnown RBP eCLIP17.51■□□□□ 0.391e-6■■■■□ 20.8
SCAP-207ENST00000441517 STOX1Q6ZVD7 989 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 ZNF771Q7L3S4 317 aaPredicted RBP17.51■□□□□ 0.39
SCAP-207ENST00000441517 STAMQ92783 540 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 GOLGA8AA7E2F4 631 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 M0R2C6 588 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 SLC3A2P08195 630 aaKnown RBP17.51■□□□□ 0.39
SCAP-207ENST00000441517 IL2RBP14784 551 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 DHX8Q14562 1220 aaKnown RBP17.51■□□□□ 0.39
SCAP-207ENST00000441517 PDIA6Q15084 440 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 PUS7LQ9H0K6 701 aaKnown RBP17.51■□□□□ 0.39
SCAP-207ENST00000441517 PDCL3Q9H2J4 239 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 CTNNA3Q9UI47 895 aa17.51■□□□□ 0.39
SCAP-207ENST00000441517 COBLO75128 1261 aa17.5■□□□□ 0.39
SCAP-207ENST00000441517 GPIHBP1Q8IV16 184 aa17.5■□□□□ 0.39
SCAP-207ENST00000441517 MAGEB6Q8N7X4 407 aa17.5■□□□□ 0.39
SCAP-207ENST00000441517 AOX1Q06278 1338 aa17.5■□□□□ 0.39
SCAP-207ENST00000441517 PGBD1Q96JS3 809 aa17.5■□□□□ 0.39
SCAP-207ENST00000441517 GREM2Q9H772 168 aa17.5■□□□□ 0.39
SCAP-207ENST00000441517 ARMT1Q9H993 441 aa17.5■□□□□ 0.39
SCAP-207ENST00000441517 MCM5P33992 734 aa17.5■□□□□ 0.39
SCAP-207ENST00000441517 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
SCAP-207ENST00000441517 MRVI1Q9Y6F6 885 aa17.5■□□□□ 0.39
SCAP-207ENST00000441517 C11orf57Q6ZUT1 292 aaPredicted RBP17.49■□□□□ 0.39
SCAP-207ENST00000441517 NCOA7Q8NI08 942 aa17.49■□□□□ 0.39
SCAP-207ENST00000441517 KCNJ14Q9UNX9 436 aa17.49■□□□□ 0.39
SCAP-207ENST00000441517 NAT10Q9H0A0 1025 aaKnown RBP17.49■□□□□ 0.39
SCAP-207ENST00000441517 BABAM1Q9NWV8 329 aa17.49■□□□□ 0.39
SCAP-207ENST00000441517 AP5Z1O43299 807 aa17.49■□□□□ 0.39
SCAP-207ENST00000441517 AFMP43652 599 aa17.49■□□□□ 0.39
SCAP-207ENST00000441517 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
SCAP-207ENST00000441517 IFNKQ9P0W0 207 aa17.49■□□□□ 0.39
SCAP-207ENST00000441517 CLIC4Q9Y696 253 aa17.49■□□□□ 0.39
SCAP-207ENST00000441517 STX17P56962 302 aa17.48■□□□□ 0.39
SCAP-207ENST00000441517 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
SCAP-207ENST00000441517 ST3GAL1Q11201 340 aa17.48■□□□□ 0.39
SCAP-207ENST00000441517 HLFQ16534 295 aa17.48■□□□□ 0.39
SCAP-207ENST00000441517 CLIC6Q96NY7 704 aa17.48■□□□□ 0.39
SCAP-207ENST00000441517 AKAP2Q9Y2D5 859 aa17.48■□□□□ 0.39
SCAP-207ENST00000441517 SLC12A7Q9Y666 1083 aa17.48■□□□□ 0.39
SCAP-207ENST00000441517 IARSP41252 1262 aaKnown RBP17.48■□□□□ 0.39
SCAP-207ENST00000441517 PTPN14Q15678 1187 aa17.48■□□□□ 0.39
SCAP-207ENST00000441517 TMEM94Q12767 1356 aa17.48■□□□□ 0.39
SCAP-207ENST00000441517 U2AF2P26368 475 aaKnown RBP eCLIP17.48■□□□□ 0.395e-6■□□□□ 11
SCAP-207ENST00000441517 COPRSQ9NQ92 184 aa17.48■□□□□ 0.39
SCAP-207ENST00000441517 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.47■□□□□ 0.39
SCAP-207ENST00000441517 ZNF827Q17R98 1081 aa17.47■□□□□ 0.39
SCAP-207ENST00000441517 UBAC1Q9BSL1 405 aa17.47■□□□□ 0.39
SCAP-207ENST00000441517 ANO10Q9NW15 660 aa17.47■□□□□ 0.39
SCAP-207ENST00000441517 UBE2Q2LH0YL09 131 aa17.47■□□□□ 0.39
SCAP-207ENST00000441517 UVSSAQ2YD98 709 aa17.47■□□□□ 0.39
SCAP-207ENST00000441517 OLFM4Q6UX06 510 aa17.47■□□□□ 0.39
SCAP-207ENST00000441517 UBE2Q2Q8WVN8 375 aa17.47■□□□□ 0.39
SCAP-207ENST00000441517 TM6SF1Q9BZW5 370 aa17.47■□□□□ 0.39
SCAP-207ENST00000441517 MAST3O60307 1309 aa17.47■□□□□ 0.39
SCAP-207ENST00000441517 EXOC5O00471 708 aa17.46■□□□□ 0.39
SCAP-207ENST00000441517 SPTLC2O15270 562 aa17.46■□□□□ 0.39
SCAP-207ENST00000441517 PHKA1P46020 1223 aa17.46■□□□□ 0.39
SCAP-207ENST00000441517 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
SCAP-207ENST00000441517 HAUS7Q99871 368 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms