RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 SCARF1Q14162 830 aa24.43■■□□□ 1.5
VRK2-207ENST00000440705 LRRFIP1Q32MZ4 808 aaKnown RBP24.43■■□□□ 1.5
VRK2-207ENST00000440705 RAD50Q92878 1312 aa24.43■■□□□ 1.5
VRK2-207ENST00000440705 SRGNP10124 158 aa24.43■■□□□ 1.5
VRK2-207ENST00000440705 CAVIN4Q5BKX8 364 aa24.43■■□□□ 1.5
VRK2-207ENST00000440705 ANO2Q9NQ90 1003 aa24.43■■□□□ 1.5
VRK2-207ENST00000440705 SNRKQ9NRH2 765 aa24.43■■□□□ 1.5
VRK2-207ENST00000440705 AKAP11Q9UKA4 1901 aa24.42■■□□□ 1.5
VRK2-207ENST00000440705 ZAP70P43403 619 aa24.42■■□□□ 1.5
VRK2-207ENST00000440705 TTF1Q15361 905 aaPredicted RBP24.42■■□□□ 1.5
VRK2-207ENST00000440705 KIAA1211Q6ZU35 1233 aa24.42■■□□□ 1.5
VRK2-207ENST00000440705 ALDH1B1P30837 517 aa24.41■■□□□ 1.5
VRK2-207ENST00000440705 BCAMP50895 628 aa24.41■■□□□ 1.5
VRK2-207ENST00000440705 NMIQ13287 307 aaPredicted RBP24.41■■□□□ 1.5
VRK2-207ENST00000440705 IPO9Q96P70 1041 aaKnown RBP24.41■■□□□ 1.5
VRK2-207ENST00000440705 GNL3LQ9NVN8 582 aaKnown RBP24.41■■□□□ 1.5
VRK2-207ENST00000440705 ANKIB1Q9P2G1 1089 aa24.41■■□□□ 1.5
VRK2-207ENST00000440705 LEMD3Q9Y2U8 911 aa24.41■■□□□ 1.5
VRK2-207ENST00000440705 ZNF804BA4D1E1 1349 aa24.41■■□□□ 1.5
VRK2-207ENST00000440705 XDHP47989 1333 aa24.41■■□□□ 1.5
VRK2-207ENST00000440705 MASTLQ96GX5 879 aa24.4■■□□□ 1.5
VRK2-207ENST00000440705 PDGFDQ9GZP0 370 aaPredicted RBP24.4■■□□□ 1.5
VRK2-207ENST00000440705 ANTXR1Q9H6X2 564 aa24.4■■□□□ 1.5
VRK2-207ENST00000440705 FAM227BQ96M60 508 aa24.4■■□□□ 1.5
VRK2-207ENST00000440705 IL25Q9H293 177 aa24.4■■□□□ 1.5
VRK2-207ENST00000440705 VPS37DQ86XT2 251 aa24.39■■□□□ 1.49
VRK2-207ENST00000440705 SPATA5Q8NB90 893 aa24.39■■□□□ 1.49
VRK2-207ENST00000440705 ZFYP08048 801 aaPredicted RBP24.38■■□□□ 1.49
VRK2-207ENST00000440705 PI16Q6UXB8 463 aa24.38■■□□□ 1.49
VRK2-207ENST00000440705 UPF1Q92900 1129 aaKnown RBP eCLIP24.38■■□□□ 1.49
VRK2-207ENST00000440705 HMG20BQ9P0W2 317 aa24.38■■□□□ 1.49
VRK2-207ENST00000440705 MCCP23508 829 aa24.37■■□□□ 1.49
VRK2-207ENST00000440705 RASGRF1Q13972 1273 aa24.37■■□□□ 1.49
VRK2-207ENST00000440705 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.37■■□□□ 1.49
VRK2-207ENST00000440705 A0A0D9SFI3 127 aa24.37■■□□□ 1.49
VRK2-207ENST00000440705 WTIPA6NIX2 430 aaPredicted RBP24.37■■□□□ 1.49
VRK2-207ENST00000440705 H0YIN7 160 aa24.37■■□□□ 1.49
VRK2-207ENST00000440705 PPEF1O14829 653 aaPredicted RBP24.37■■□□□ 1.49
VRK2-207ENST00000440705 RNF113AO15541 343 aaKnown RBP24.37■■□□□ 1.49
VRK2-207ENST00000440705 CYP2E1P05181 493 aaPredicted RBP24.37■■□□□ 1.49
VRK2-207ENST00000440705 GYG1P46976 350 aa24.37■■□□□ 1.49
VRK2-207ENST00000440705 FBXO33Q7Z6M2 555 aa24.37■■□□□ 1.49
VRK2-207ENST00000440705 SP8Q8IXZ3 490 aa24.37■■□□□ 1.49
VRK2-207ENST00000440705 FAM84BQ96KN1 310 aaPredicted RBP24.37■■□□□ 1.49
VRK2-207ENST00000440705 C2CD5Q86YS7 1000 aa24.36■■□□□ 1.49
VRK2-207ENST00000440705 HELLSQ9NRZ9 838 aa24.36■■□□□ 1.49
VRK2-207ENST00000440705 ATP2B4P23634 1241 aa24.35■■□□□ 1.49
VRK2-207ENST00000440705 MCMDC2Q4G0Z9 681 aa24.35■■□□□ 1.49
VRK2-207ENST00000440705 ZSCAN25Q6NSZ9 544 aa24.35■■□□□ 1.49
VRK2-207ENST00000440705 LSG1Q9H089 658 aaKnown RBP24.35■■□□□ 1.49
VRK2-207ENST00000440705 PODXL2Q9NZ53 605 aa24.35■■□□□ 1.49
VRK2-207ENST00000440705 NSFL1CQ9UNZ2 370 aaKnown RBP24.35■■□□□ 1.49
VRK2-207ENST00000440705 ATP6V0A2Q9Y487 856 aa24.35■■□□□ 1.49
VRK2-207ENST00000440705 SEMA3EO15041 775 aa24.34■■□□□ 1.49
VRK2-207ENST00000440705 HIBADHP31937 336 aaKnown RBP24.34■■□□□ 1.49
VRK2-207ENST00000440705 GPSM2P81274 684 aa24.34■■□□□ 1.49
VRK2-207ENST00000440705 STYK1Q6J9G0 422 aa24.34■■□□□ 1.49
VRK2-207ENST00000440705 COL11A2P13942 1736 aaPredicted RBP24.34■■□□□ 1.49
VRK2-207ENST00000440705 MED23Q9ULK4 1368 aa24.34■■□□□ 1.49
VRK2-207ENST00000440705 ZMYM1Q5SVZ6 1142 aa24.34■■□□□ 1.49
VRK2-207ENST00000440705 C15orf52Q6ZUT6 534 aaKnown RBP24.34■■□□□ 1.49
VRK2-207ENST00000440705 GGA1Q9UJY5 639 aa24.34■■□□□ 1.49
VRK2-207ENST00000440705 DENND2AQ9ULE3 1009 aa24.34■■□□□ 1.49
VRK2-207ENST00000440705 ZBTB22O15209 634 aa24.33■■□□□ 1.49
VRK2-207ENST00000440705 ZNF622Q969S3 477 aaKnown RBP eCLIP24.33■■□□□ 1.49
VRK2-207ENST00000440705 KIF2CQ99661 725 aa24.33■■□□□ 1.49
VRK2-207ENST00000440705 TMX4Q9H1E5 349 aaPredicted RBP24.33■■□□□ 1.49
VRK2-207ENST00000440705 LRRC37AA6NMS7 1700 aa24.32■■□□□ 1.48
VRK2-207ENST00000440705 MYH7P12883 1935 aa24.32■■□□□ 1.48
VRK2-207ENST00000440705 PIH1D3Q9NQM4 214 aaKnown RBP24.32■■□□□ 1.48
VRK2-207ENST00000440705 CCDC171Q6TFL3 1326 aa24.32■■□□□ 1.48
VRK2-207ENST00000440705 IRS2Q9Y4H2 1338 aa24.32■■□□□ 1.48
VRK2-207ENST00000440705 KLRK1P26718 216 aa24.31■■□□□ 1.48
VRK2-207ENST00000440705 ANAPC15P60006 121 aa24.31■■□□□ 1.48
VRK2-207ENST00000440705 IDH1O75874 414 aaKnown RBP24.3■■□□□ 1.48
VRK2-207ENST00000440705 UFL1O94874 794 aa24.3■■□□□ 1.48
VRK2-207ENST00000440705 HSPA4P34932 840 aa24.3■■□□□ 1.48
VRK2-207ENST00000440705 FRAT2O75474 233 aaPredicted RBP24.3■■□□□ 1.48
VRK2-207ENST00000440705 MAP3K12Q12852 859 aa24.3■■□□□ 1.48
VRK2-207ENST00000440705 BECN1Q14457 450 aa24.3■■□□□ 1.48
VRK2-207ENST00000440705 WASHC4Q2M389 1173 aa24.3■■□□□ 1.48
VRK2-207ENST00000440705 ZNF589Q86UQ0 364 aaPredicted RBP24.3■■□□□ 1.48
VRK2-207ENST00000440705 CNKSR1Q969H4 720 aa24.3■■□□□ 1.48
VRK2-207ENST00000440705 PDS5AQ29RF7 1337 aaKnown RBP24.3■■□□□ 1.48
VRK2-207ENST00000440705 CHGBP05060 677 aa24.29■■□□□ 1.48
VRK2-207ENST00000440705 PTH1RQ03431 593 aa24.29■■□□□ 1.48
VRK2-207ENST00000440705 SLC9C2Q5TAH2 1124 aa24.29■■□□□ 1.48
VRK2-207ENST00000440705 APPBP2Q92624 585 aa24.29■■□□□ 1.48
VRK2-207ENST00000440705 MAP4K1Q92918 833 aa24.29■■□□□ 1.48
VRK2-207ENST00000440705 SEC62Q99442 399 aaKnown RBP24.29■■□□□ 1.48
VRK2-207ENST00000440705 DAXXQ9UER7 740 aaPredicted RBP24.29■■□□□ 1.48
VRK2-207ENST00000440705 IQSEC3Q9UPP2 1182 aaPredicted RBP24.29■■□□□ 1.48
VRK2-207ENST00000440705 C10orf71Q711Q0 1435 aa24.29■■□□□ 1.48
VRK2-207ENST00000440705 ADD2P35612 726 aa24.28■■□□□ 1.48
VRK2-207ENST00000440705 RABEP1Q15276 862 aa24.28■■□□□ 1.48
VRK2-207ENST00000440705 UBE3CQ15386 1083 aa24.28■■□□□ 1.48
VRK2-207ENST00000440705 ZNF804AQ7Z570 1209 aa24.28■■□□□ 1.48
VRK2-207ENST00000440705 SLC51AQ86UW1 340 aa24.28■■□□□ 1.48
VRK2-207ENST00000440705 TXNRD3Q86VQ6 643 aa24.28■■□□□ 1.48
VRK2-207ENST00000440705 TBC1D16Q8TBP0 767 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms