RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 ZNF316A6NFI3 1004 aaPredicted RBP26.47■■□□□ 1.83
CPNE1-219ENST00000440240 WTIPA6NIX2 430 aaPredicted RBP26.47■■□□□ 1.83
CPNE1-219ENST00000440240 ANKRD2Q9GZV1 360 aa26.47■■□□□ 1.83
CPNE1-219ENST00000440240 MYOZ2Q9NPC6 264 aa26.47■■□□□ 1.83
CPNE1-219ENST00000440240 POLR2AP24928 1970 aaKnown RBP26.46■■□□□ 1.83
CPNE1-219ENST00000440240 CSF1RP07333 972 aa26.46■■□□□ 1.83
CPNE1-219ENST00000440240 ITGA6P23229 1130 aa26.46■■□□□ 1.83
CPNE1-219ENST00000440240 MPHOSPH8Q99549 860 aa26.46■■□□□ 1.83
CPNE1-219ENST00000440240 COA1Q9GZY4 146 aa26.46■■□□□ 1.83
CPNE1-219ENST00000440240 TSKSQ9UJT2 592 aa26.46■■□□□ 1.83
CPNE1-219ENST00000440240 CASP7P55210 303 aa26.45■■□□□ 1.82
CPNE1-219ENST00000440240 EXOSC9Q06265 439 aaKnown RBP26.45■■□□□ 1.82
CPNE1-219ENST00000440240 ANGEL2Q5VTE6 544 aaKnown RBP26.45■■□□□ 1.82
CPNE1-219ENST00000440240 ABHD8Q96I13 439 aa26.45■■□□□ 1.82
CPNE1-219ENST00000440240 ASTN2O75129 1339 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-219ENST00000440240 ZNF157P51786 506 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-219ENST00000440240 OGFOD1Q8N543 542 aa26.44■■□□□ 1.82
CPNE1-219ENST00000440240 MMP14P50281 582 aa26.43■■□□□ 1.82
CPNE1-219ENST00000440240 STRIP1Q5VSL9 837 aa26.43■■□□□ 1.82
CPNE1-219ENST00000440240 CDCA5Q96FF9 252 aa26.43■■□□□ 1.82
CPNE1-219ENST00000440240 MYH3P11055 1940 aa26.43■■□□□ 1.82
CPNE1-219ENST00000440240 ZNF804BA4D1E1 1349 aa26.42■■□□□ 1.82
CPNE1-219ENST00000440240 MYO3BQ8WXR4 1341 aa26.42■■□□□ 1.82
CPNE1-219ENST00000440240 PITPNM2Q9BZ72 1349 aa26.42■■□□□ 1.82
CPNE1-219ENST00000440240 FAM155AB1AL88 458 aaPredicted RBP26.42■■□□□ 1.82
CPNE1-219ENST00000440240 FAM161AQ3B820 660 aa26.42■■□□□ 1.82
CPNE1-219ENST00000440240 DACT2Q5SW24 774 aa26.42■■□□□ 1.82
CPNE1-219ENST00000440240 ZIC5Q96T25 663 aa26.42■■□□□ 1.82
CPNE1-219ENST00000440240 ANKRD18BA2A2Z9 1011 aa26.4■■□□□ 1.82
CPNE1-219ENST00000440240 FKBP1BP68106 108 aa26.4■■□□□ 1.82
CPNE1-219ENST00000440240 TXNRD3Q86VQ6 643 aa26.4■■□□□ 1.82
CPNE1-219ENST00000440240 CACNA1FO60840 1977 aa26.4■■□□□ 1.82
CPNE1-219ENST00000440240 KIF23Q02241 960 aaPredicted RBP26.39■■□□□ 1.82
CPNE1-219ENST00000440240 TTLL5Q6EMB2 1281 aa26.39■■□□□ 1.82
CPNE1-219ENST00000440240 FBXW7Q969H0 707 aa26.39■■□□□ 1.82
CPNE1-219ENST00000440240 PSME4Q14997 1843 aa26.38■■□□□ 1.81
CPNE1-219ENST00000440240 KCNJ4P48050 445 aa26.38■■□□□ 1.81
CPNE1-219ENST00000440240 CHRNDQ07001 517 aa26.37■■□□□ 1.81
CPNE1-219ENST00000440240 IFIT5Q13325 482 aaKnown RBP26.37■■□□□ 1.81
CPNE1-219ENST00000440240 BEND3Q5T5X7 828 aa26.37■■□□□ 1.81
CPNE1-219ENST00000440240 MXD3Q9BW11 206 aa26.37■■□□□ 1.81
CPNE1-219ENST00000440240 F6X3S4 739 aa26.36■■□□□ 1.81
CPNE1-219ENST00000440240 NBPF9Q3BBW0 867 aa26.36■■□□□ 1.81
CPNE1-219ENST00000440240 SPINK5Q9NQ38 1064 aaPredicted RBP26.36■■□□□ 1.81
CPNE1-219ENST00000440240 SAGE1Q9NXZ1 904 aa26.36■■□□□ 1.81
CPNE1-219ENST00000440240 SLC10A3P09131 477 aa26.35■■□□□ 1.81
CPNE1-219ENST00000440240 FOXO4P98177 505 aa26.35■■□□□ 1.81
CPNE1-219ENST00000440240 REM2Q8IYK8 340 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-219ENST00000440240 FAM9BQ8IZU0 186 aa26.35■■□□□ 1.81
CPNE1-219ENST00000440240 HDAC9Q9UKV0 1011 aa26.35■■□□□ 1.81
CPNE1-219ENST00000440240 WNT10BO00744 389 aa26.34■■□□□ 1.81
CPNE1-219ENST00000440240 KLRK1P26718 216 aa26.33■■□□□ 1.81
CPNE1-219ENST00000440240 GTF2IP78347 998 aa26.33■■□□□ 1.81
CPNE1-219ENST00000440240 CD209Q9NNX6 404 aa26.33■■□□□ 1.81
CPNE1-219ENST00000440240 CHMP3Q9Y3E7 222 aa26.33■■□□□ 1.81
CPNE1-219ENST00000440240 SPEF2Q9C093 1822 aa26.32■■□□□ 1.8
CPNE1-219ENST00000440240 CCDC85CA6NKD9 419 aa26.32■■□□□ 1.8
CPNE1-219ENST00000440240 C15orf52Q6ZUT6 534 aaKnown RBP26.32■■□□□ 1.8
CPNE1-219ENST00000440240 CSRNP1Q96S65 589 aa26.32■■□□□ 1.8
CPNE1-219ENST00000440240 GRM8O00222 908 aa26.31■■□□□ 1.8
CPNE1-219ENST00000440240 CCDC57Q2TAC2 916 aa26.31■■□□□ 1.8
CPNE1-219ENST00000440240 LMBR1LQ6UX01 489 aa26.31■■□□□ 1.8
CPNE1-219ENST00000440240 KIAA0825Q8IV33 1275 aa26.31■■□□□ 1.8
CPNE1-219ENST00000440240 RNF186Q9NXI6 227 aa26.31■■□□□ 1.8
CPNE1-219ENST00000440240 TAF5LO75529 589 aa26.3■■□□□ 1.8
CPNE1-219ENST00000440240 NF2P35240 595 aa26.3■■□□□ 1.8
CPNE1-219ENST00000440240 MCOLN1Q9GZU1 580 aa26.3■■□□□ 1.8
CPNE1-219ENST00000440240 C9orf78Q9NZ63 289 aaPredicted RBP26.3■■□□□ 1.8
CPNE1-219ENST00000440240 SCAF8Q9UPN6 1271 aaKnown RBP26.3■■□□□ 1.8
CPNE1-219ENST00000440240 CASP8AP2Q9UKL3 1982 aa26.29■■□□□ 1.8
CPNE1-219ENST00000440240 TRPA1O75762 1119 aa26.29■■□□□ 1.8
CPNE1-219ENST00000440240 ALDH1L1O75891 902 aa26.29■■□□□ 1.8
CPNE1-219ENST00000440240 RASAL3Q86YV0 1011 aa26.29■■□□□ 1.8
CPNE1-219ENST00000440240 HELBQ8NG08 1087 aaPredicted RBP26.29■■□□□ 1.8
CPNE1-219ENST00000440240 DGKZQ13574 1117 aa26.28■■□□□ 1.8
CPNE1-219ENST00000440240 TAF7LQ5H9L4 462 aa26.28■■□□□ 1.8
CPNE1-219ENST00000440240 PRAMEF18Q5VWM3 479 aa26.28■■□□□ 1.8
CPNE1-219ENST00000440240 LDHAL6AQ6ZMR3 332 aa26.28■■□□□ 1.8
CPNE1-219ENST00000440240 UBE2Q2LH0YL09 131 aa26.27■■□□□ 1.8
CPNE1-219ENST00000440240 SASH1O94885 1247 aa26.27■■□□□ 1.8
CPNE1-219ENST00000440240 TTLL12Q14166 644 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-219ENST00000440240 SLC4A10Q6U841 1118 aa26.27■■□□□ 1.8
CPNE1-219ENST00000440240 ZNF804AQ7Z570 1209 aa26.27■■□□□ 1.8
CPNE1-219ENST00000440240 APOBEC3FQ8IUX4 373 aaKnown RBP26.27■■□□□ 1.8
CPNE1-219ENST00000440240 SRCIN1Q9C0H9 1055 aa26.27■■□□□ 1.8
CPNE1-219ENST00000440240 PAPPA2Q9BXP8 1791 aa26.26■■□□□ 1.79
CPNE1-219ENST00000440240 IRS2Q9Y4H2 1338 aa26.26■■□□□ 1.79
CPNE1-219ENST00000440240 SNAP23O00161 211 aa26.26■■□□□ 1.79
CPNE1-219ENST00000440240 EPHA10Q5JZY3 1008 aa26.26■■□□□ 1.79
CPNE1-219ENST00000440240 MOB2Q70IA6 237 aa26.26■■□□□ 1.79
CPNE1-219ENST00000440240 CNNM1Q9NRU3 951 aa26.26■■□□□ 1.79
CPNE1-219ENST00000440240 IL1R1P14778 569 aa26.25■■□□□ 1.79
CPNE1-219ENST00000440240 DLGAP5Q15398 846 aa26.25■■□□□ 1.79
CPNE1-219ENST00000440240 ZBED3Q96IU2 234 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-219ENST00000440240 FKBP1AP62942 108 aaKnown RBP26.23■■□□□ 1.79
CPNE1-219ENST00000440240 ARMC9Q7Z3E5 817 aa26.23■■□□□ 1.79
CPNE1-219ENST00000440240 MTMR14Q8NCE2 650 aa26.23■■□□□ 1.79
CPNE1-219ENST00000440240 ZNF594Q96JF6 807 aaPredicted RBP26.23■■□□□ 1.79
CPNE1-219ENST00000440240 PLIN1O60240 522 aa26.22■■□□□ 1.79
CPNE1-219ENST00000440240 RGS19P49795 217 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms