RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TTLL7Q6ZT98 887 aa18.08■□□□□ 0.48
APP-208ENST00000439274 NBPF15Q8N660 670 aa18.08■□□□□ 0.48
APP-208ENST00000439274 USP28Q96RU2 1077 aa18.08■□□□□ 0.48
APP-208ENST00000439274 LRRC24Q50LG9 513 aa18.07■□□□□ 0.48
APP-208ENST00000439274 C16orf45Q96MC5 204 aaPredicted RBP18.07■□□□□ 0.48
APP-208ENST00000439274 CLIP2Q9UDT6 1046 aa18.07■□□□□ 0.48
APP-208ENST00000439274 E7EWF7 191 aa18.07■□□□□ 0.48
APP-208ENST00000439274 EXOSC10Q01780 885 aaKnown RBP18.07■□□□□ 0.48
APP-208ENST00000439274 LLPHQ9BRT6 129 aaKnown RBP18.07■□□□□ 0.48
APP-208ENST00000439274 SPATA31A3Q5VYP0 1347 aa18.07■□□□□ 0.48
APP-208ENST00000439274 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
APP-208ENST00000439274 HSPD1P10809 573 aaKnown RBP18.06■□□□□ 0.48
APP-208ENST00000439274 IQCB1Q15051 598 aa18.06■□□□□ 0.48
APP-208ENST00000439274 TTLL5Q6EMB2 1281 aa18.06■□□□□ 0.48
APP-208ENST00000439274 CACTINQ8WUQ7 758 aaKnown RBP18.06■□□□□ 0.48
APP-208ENST00000439274 ERCC4Q92889 916 aaPredicted RBP18.06■□□□□ 0.48
APP-208ENST00000439274 PRDM10Q9NQV6 1147 aa18.06■□□□□ 0.48
APP-208ENST00000439274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.06■□□□□ 0.483e-9■■□□□ 12.7
APP-208ENST00000439274 H7C1W4 665 aa18.06■□□□□ 0.48
APP-208ENST00000439274 HMGB1P09429 215 aaKnown RBP18.06■□□□□ 0.48
APP-208ENST00000439274 ZMYM1Q5SVZ6 1142 aa18.06■□□□□ 0.48
APP-208ENST00000439274 NAA16Q6N069 864 aaPredicted RBP18.06■□□□□ 0.48
APP-208ENST00000439274 HELLSQ9NRZ9 838 aa18.06■□□□□ 0.48
APP-208ENST00000439274 RCOR1Q9UKL0 485 aa18.06■□□□□ 0.48
APP-208ENST00000439274 MAST3O60307 1309 aa18.06■□□□□ 0.48
APP-208ENST00000439274 DSCC1Q9BVC3 393 aa18.05■□□□□ 0.48
APP-208ENST00000439274 GPHNQ9NQX3 736 aaPredicted RBP18.05■□□□□ 0.48
APP-208ENST00000439274 SNW1Q13573 536 aaKnown RBP18.05■□□□□ 0.48
APP-208ENST00000439274 ARID5BQ14865 1188 aa18.05■□□□□ 0.48
APP-208ENST00000439274 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.05■□□□□ 0.48
APP-208ENST00000439274 ILDR1Q86SU0 546 aaPredicted RBP18.05■□□□□ 0.48
APP-208ENST00000439274 NHSL1Q5SYE7 1610 aa18.04■□□□□ 0.48
APP-208ENST00000439274 M0R2C6 588 aa18.04■□□□□ 0.48
APP-208ENST00000439274 FBXW7Q969H0 707 aa18.04■□□□□ 0.48
APP-208ENST00000439274 SLAIN2Q9P270 581 aa18.04■□□□□ 0.48
APP-208ENST00000439274 GOLGA6L19H0YKK7 550 aa18.04■□□□□ 0.48
APP-208ENST00000439274 PDIA3P30101 505 aaKnown RBP18.04■□□□□ 0.48
APP-208ENST00000439274 PPP4R3BQ5MIZ7 849 aa18.04■□□□□ 0.48
APP-208ENST00000439274 PUS3Q9BZE2 481 aaKnown RBP18.04■□□□□ 0.48
APP-208ENST00000439274 ZBTB3Q9H5J0 574 aa18.04■□□□□ 0.48
APP-208ENST00000439274 ABCA3Q99758 1704 aa18.03■□□□□ 0.48
APP-208ENST00000439274 IFIT1P09914 478 aaKnown RBP18.03■□□□□ 0.48
APP-208ENST00000439274 AGXT2Q9BYV1 514 aa18.03■□□□□ 0.48
APP-208ENST00000439274 CWC25Q9NXE8 425 aaPredicted RBP18.03■□□□□ 0.48
APP-208ENST00000439274 A1BGP04217 495 aa18.03■□□□□ 0.48
APP-208ENST00000439274 GLI3P10071 1580 aa18.03■□□□□ 0.48
APP-208ENST00000439274 ME1P48163 572 aa18.03■□□□□ 0.48
APP-208ENST00000439274 CCDC73Q6ZRK6 1079 aa18.03■□□□□ 0.48
APP-208ENST00000439274 SALL1Q9NSC2 1324 aa18.03■□□□□ 0.48
APP-208ENST00000439274 A0A1B0GUL7 405 aa18.02■□□□□ 0.48
APP-208ENST00000439274 STX1AQ16623 288 aa18.02■□□□□ 0.48
APP-208ENST00000439274 OTUD7BQ6GQQ9 843 aa18.02■□□□□ 0.48
APP-208ENST00000439274 FSIP1Q8NA03 581 aa18.02■□□□□ 0.48
APP-208ENST00000439274 MYH15Q9Y2K3 1946 aa18.02■□□□□ 0.48
APP-208ENST00000439274 RNF113AO15541 343 aaKnown RBP18.02■□□□□ 0.47
APP-208ENST00000439274 IL15P40933 162 aaPredicted RBP18.02■□□□□ 0.47
APP-208ENST00000439274 ATP2B3Q16720 1220 aa18.02■□□□□ 0.47
APP-208ENST00000439274 SOS2Q07890 1332 aaPredicted RBP18.01■□□□□ 0.47
APP-208ENST00000439274 EYA2O00167 538 aa18.01■□□□□ 0.47
APP-208ENST00000439274 KINO60870 393 aaKnown RBP18.01■□□□□ 0.47
APP-208ENST00000439274 TNNT1P13805 278 aa18.01■□□□□ 0.47
APP-208ENST00000439274 FDPSP14324 419 aaKnown RBP18.01■□□□□ 0.47
APP-208ENST00000439274 HAND2P61296 217 aa18.01■□□□□ 0.47
APP-208ENST00000439274 CBX1P83916 185 aa18.01■□□□□ 0.47
APP-208ENST00000439274 ENGASEQ8NFI3 743 aa18.01■□□□□ 0.47
APP-208ENST00000439274 OSBP2Q969R2 916 aa18.01■□□□□ 0.47
APP-208ENST00000439274 CARMIL3Q8ND23 1372 aa18.01■□□□□ 0.47
APP-208ENST00000439274 CTIFO43310 598 aaKnown RBP18.01■□□□□ 0.47
APP-208ENST00000439274 FKBP4Q02790 459 aaKnown RBP eCLIP18.01■□□□□ 0.47
APP-208ENST00000439274 ZNF396Q96N95 335 aaPredicted RBP18.01■□□□□ 0.47
APP-208ENST00000439274 HSP90AB3PQ58FF7 597 aa18■□□□□ 0.47
APP-208ENST00000439274 RAB11FIP4Q86YS3 637 aa18■□□□□ 0.47
APP-208ENST00000439274 DHX40Q8IX18 779 aaKnown RBP18■□□□□ 0.47
APP-208ENST00000439274 PDCL2Q8N4E4 241 aa18■□□□□ 0.47
APP-208ENST00000439274 CTAGE5O15320 804 aa18■□□□□ 0.47
APP-208ENST00000439274 CAVIN2O95810 425 aa18■□□□□ 0.47
APP-208ENST00000439274 CDC25BP30305 580 aa18■□□□□ 0.47
APP-208ENST00000439274 FAM160A1Q05DH4 1040 aa18■□□□□ 0.47
APP-208ENST00000439274 TPD52L1Q16890 204 aaPredicted RBP18■□□□□ 0.47
APP-208ENST00000439274 BCL11BQ9C0K0 894 aaPredicted RBP18■□□□□ 0.47
APP-208ENST00000439274 GPR108Q9NPR9 543 aa18■□□□□ 0.47
APP-208ENST00000439274 BECN2A8MW95 431 aa17.99■□□□□ 0.47
APP-208ENST00000439274 SARM1Q6SZW1 724 aa17.99■□□□□ 0.47
APP-208ENST00000439274 ANKRD7Q92527 254 aa17.99■□□□□ 0.47
APP-208ENST00000439274 CCDC85AQ96PX6 553 aaPredicted RBP17.99■□□□□ 0.47
APP-208ENST00000439274 PCDHA7Q9UN72 937 aa17.99■□□□□ 0.47
APP-208ENST00000439274 ABCC6O95255 1503 aa17.99■□□□□ 0.47
APP-208ENST00000439274 USP27XA6NNY8 438 aa17.99■□□□□ 0.47
APP-208ENST00000439274 ADORA1P30542 326 aa17.99■□□□□ 0.47
APP-208ENST00000439274 LRRC8AQ8IWT6 810 aa17.99■□□□□ 0.47
APP-208ENST00000439274 SMAP1Q8IYB5 467 aaPredicted RBP17.99■□□□□ 0.47
APP-208ENST00000439274 ZNF274Q96GC6 653 aaPredicted RBP17.99■□□□□ 0.47
APP-208ENST00000439274 A0A1B0GVL5 298 aa17.98■□□□□ 0.47
APP-208ENST00000439274 FOXP2O15409 715 aa17.98■□□□□ 0.47
APP-208ENST00000439274 FILIP1Q7Z7B0 1213 aa17.98■□□□□ 0.47
APP-208ENST00000439274 GJB4Q9NTQ9 266 aa17.98■□□□□ 0.47
APP-208ENST00000439274 SPDYE4A6NLX3 237 aa17.98■□□□□ 0.47
APP-208ENST00000439274 NAA30Q147X3 362 aaPredicted RBP17.98■□□□□ 0.47
APP-208ENST00000439274 AOPEPQ8N6M6 819 aa17.98■□□□□ 0.47
APP-208ENST00000439274 TJP1Q07157 1748 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms