RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 SH2B1Q9NRF2 756 aaPredicted RBP13.21□□□□□ -0.29
ERGIC3-207ENST00000438317 HMG20BQ9P0W2 317 aa13.21□□□□□ -0.29
ERGIC3-207ENST00000438317 ZDHHC9Q9Y397 364 aa13.21□□□□□ -0.29
ERGIC3-207ENST00000438317 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 TIAM2Q8IVF5 1701 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 NFKBIEO00221 500 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 FOXN1O15353 648 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 PTH1RQ03431 593 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 ANKRD1Q15327 319 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 HSP90AB3PQ58FF7 597 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 KLHDC4Q8TBB5 520 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 HAUS7Q99871 368 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 PLA2G12BQ9BX93 195 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 PDRG1Q9NUG6 133 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 LMBRD1Q9NUN5 540 aa13.2□□□□□ -0.3
ERGIC3-207ENST00000438317 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 EYA2O00167 538 aa13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 PCCAP05165 728 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 KRT32Q14532 448 aa13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 NFIXQ14938 502 aa13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 CREB3L3Q68CJ9 461 aa13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 PRPF40BQ6NWY9 871 aaKnown RBP13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 RUFY3Q7L099 469 aa13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 JARID2Q92833 1246 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 MKRN1Q9UHC7 482 aaKnown RBP13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 DBNLQ9UJU6 430 aaKnown RBP13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 AKAP2Q9Y2D5 859 aa13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 RBM8AQ9Y5S9 174 aaKnown RBP13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 DLEC1Q9Y238 1755 aa13.19□□□□□ -0.3
ERGIC3-207ENST00000438317 XRCC6P12956 609 aaKnown RBP eCLIP13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 AK2P54819 239 aa13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 LRRFIP1Q32MZ4 808 aaKnown RBP13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 ATG9AQ7Z3C6 839 aa13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 JAKMIP1Q96N16 626 aaKnown RBP13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 ZBTB3Q9H5J0 574 aa13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 TLR7Q9NYK1 1049 aaKnown RBP13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 CHMP3Q9Y3E7 222 aa13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.18□□□□□ -0.3
ERGIC3-207ENST00000438317 ZPR1O75312 459 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 MBD3O95983 291 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 CCDC57Q2TAC2 916 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 MCMDC2Q4G0Z9 681 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 GIGYF2Q6Y7W6 1299 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 DNAJC10Q8IXB1 793 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 FAM227BQ96M60 508 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 GRPEL1Q9HAV7 217 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 PRDM10Q9NQV6 1147 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 HELLSQ9NRZ9 838 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 ATP6V1DQ9Y5K8 247 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 SPEF2Q9C093 1822 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 TCHHQ07283 1943 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 MED23Q9ULK4 1368 aa13.17□□□□□ -0.3
ERGIC3-207ENST00000438317 MAP3K15Q6ZN16 1313 aa13.16□□□□□ -0.3
ERGIC3-207ENST00000438317 SLC27A2O14975 620 aa13.16□□□□□ -0.3
ERGIC3-207ENST00000438317 PRPF40AO75400 957 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-207ENST00000438317 SERPINB2P05120 415 aa13.16□□□□□ -0.3
ERGIC3-207ENST00000438317 CSF1RP07333 972 aa13.16□□□□□ -0.3
ERGIC3-207ENST00000438317 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
ERGIC3-207ENST00000438317 KBTBD3Q8NAB2 608 aa13.16□□□□□ -0.3
ERGIC3-207ENST00000438317 ZBTB38Q8NAP3 1195 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-207ENST00000438317 DBNDD2Q9BQY9 259 aa13.16□□□□□ -0.3
ERGIC3-207ENST00000438317 NARFQ9UHQ1 456 aa13.16□□□□□ -0.3
ERGIC3-207ENST00000438317 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
ERGIC3-207ENST00000438317 CDHR2Q9BYE9 1310 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 A0A0D9SFI3 127 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 ERVV-1B6SEH8 477 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 TAF5LO75529 589 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 NCLP19338 710 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 ZNF445P59923 1031 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 PKP1Q13835 747 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 BLOC1S2Q6QNY1 142 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 C2CD5Q86YS7 1000 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 NEUROD6Q96NK8 337 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 BRPF3Q9ULD4 1205 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 CNTNAP1P78357 1384 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 CARMIL3Q8ND23 1372 aa13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-207ENST00000438317 NUP98P52948 1817 aa13.14□□□□□ -0.31
ERGIC3-207ENST00000438317 MYH3P11055 1940 aa13.14□□□□□ -0.31
ERGIC3-207ENST00000438317 CYP19A1P11511 503 aaPredicted RBP13.14□□□□□ -0.31
ERGIC3-207ENST00000438317 NOL8Q76FK4 1167 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-207ENST00000438317 CHMP4CQ96CF2 233 aa13.14□□□□□ -0.31
ERGIC3-207ENST00000438317 PASKQ96RG2 1323 aa13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 FER1L6Q2WGJ9 1857 aa13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 ANKRD36CQ5JPF3 1778 aa13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 RPAP1Q9BWH6 1393 aaPredicted RBP13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 H0YIN7 160 aa13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 HMGB1P09429 215 aaKnown RBP13.13□□□□□ -0.31
ERGIC3-207ENST00000438317 PDCP20941 246 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms