RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 XAGE2Q96GT9 111 aa13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 DBNLQ9UJU6 430 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 ATP10DQ9P241 1426 aa13.52□□□□□ -0.24
PDLIM5-206ENST00000437932 URI1O94763 535 aaPredicted RBP13.52□□□□□ -0.24
PDLIM5-206ENST00000437932 AFMP43652 599 aa13.52□□□□□ -0.24
PDLIM5-206ENST00000437932 ATP2B3Q16720 1220 aa13.52□□□□□ -0.24
PDLIM5-206ENST00000437932 PHKBQ93100 1093 aa13.52□□□□□ -0.24
PDLIM5-206ENST00000437932 MYO5BQ9ULV0 1848 aa13.52□□□□□ -0.24
PDLIM5-206ENST00000437932 IGHMBP2P38935 993 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 NAP1L1P55209 391 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 MAGEB6Q8N7X4 407 aa13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 TAF5LO75529 589 aa13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 SCRN1Q12765 414 aa13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 SIRT1Q96EB6 747 aa13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 IL15P40933 162 aaPredicted RBP13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 CTDSPL2Q05D32 466 aa13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 POLA2Q14181 598 aa13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 MRPS27Q92552 414 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-206ENST00000437932 SMTNL1A8MU46 457 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 B4E1Z4 1266 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 DDIT3P35638 169 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 HS1BP3Q53T59 392 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 DCAF5Q96JK2 942 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 IFNKQ9P0W0 207 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 CDC42BPGQ6DT37 1551 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 IARSP41252 1262 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 ZAP70P43403 619 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 CUL4AQ13619 759 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 CLSTN2Q9H4D0 955 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 E7EWF7 191 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 M0R2C6 588 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 TOP1P11387 765 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 PHKG2P15735 406 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 ADORA1P30542 326 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 SYKP43405 635 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
PDLIM5-206ENST00000437932 U2AF2P26368 475 aaKnown RBP eCLIP13.5□□□□□ -0.252e-9■■■■■ 29.5
PDLIM5-206ENST00000437932 ATP2B2Q01814 1243 aa13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 SNW1Q13573 536 aaKnown RBP13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 AMOTL1Q8IY63 956 aa13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 PLBD2Q8NHP8 589 aa13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 PI16Q6UXB8 463 aa13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 ARGLU1Q9NWB6 273 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 SLC4A4Q9Y6R1 1079 aa13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 CEP170BQ9Y4F5 1589 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 hCG_1642624A0A1W2PR95 340 aa13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 POLR3GO15318 223 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 PPFIBP1Q86W92 1011 aa13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 SIGLEC1Q9BZZ2 1709 aa13.5□□□□□ -0.25
PDLIM5-206ENST00000437932 SSH2Q76I76 1423 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 SPTLC2O15270 562 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 SLC5A1P13866 664 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 GOLGA6L1Q8N7Z2 621 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 GTF3C6Q969F1 213 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 MRVI1Q9Y6F6 885 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 ZNF75DP51815 510 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 MAP3K12Q12852 859 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 ANKRD20A12PQ8NF67 263 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 CTAGE5O15320 804 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 NOC3LQ8WTT2 800 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 PRIMPOLQ96LW4 560 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 RPAP1Q9BWH6 1393 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 ITGA6P23229 1130 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 MFSD6Q6ZSS7 791 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 NRKQ7Z2Y5 1582 aa13.49□□□□□ -0.25
PDLIM5-206ENST00000437932 BABAM1Q9NWV8 329 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 TAF6LQ9Y6J9 622 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 TMEM131LA2VDJ0 1609 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 CBFA2T2O43439 604 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 KIF18AQ8NI77 898 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 CAGE1Q8TC20 777 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 GPHNQ9NQX3 736 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 CCDC24Q8N4L8 307 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 IRS4O14654 1257 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 UBASH3AP57075 661 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 MAP4K1Q92918 833 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 ZBTB43O43298 467 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 CASQ1P31415 396 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 STX17P56962 302 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 GOLGA8FQ08AF8 430 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 GOLGA8DPQ0D2H9 430 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 TEX35Q5T0J7 233 aa13.48□□□□□ -0.25
PDLIM5-206ENST00000437932 HOXB7P09629 217 aa13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 TNNT3P45378 269 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 GJB4Q9NTQ9 266 aa13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 GNL3LQ9NVN8 582 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 EYA2O00167 538 aa13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 SYT10Q6XYQ8 523 aa13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 USP28Q96RU2 1077 aa13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 ADCY9O60503 1353 aa13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 CYP21A2P08686 494 aa13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 FAM193AP78312 1265 aa13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 HELLSQ9NRZ9 838 aa13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 CLIC4Q9Y696 253 aa13.47□□□□□ -0.25
PDLIM5-206ENST00000437932 KBTBD3Q8NAB2 608 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms