RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 PLEKHG2Q9H7P9 1386 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 TTC41PQ6P2S7 1318 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 FANCGO15287 622 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 NRDCO43847 1150 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 PSMA5P28066 241 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 ADD1P35611 737 aaKnown RBP12.24□□□□□ -0.45
SCAF4-203ENST00000434667 ARHGAP29Q52LW3 1261 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 ARMCX5Q6P1M9 558 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 CCDC34Q96HJ3 373 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 ELP1O95163 1332 aa12.23□□□□□ -0.45
SCAF4-203ENST00000434667 MYH15Q9Y2K3 1946 aa12.23□□□□□ -0.45
SCAF4-203ENST00000434667 CTDNEP1O95476 244 aa12.23□□□□□ -0.45
SCAF4-203ENST00000434667 IBSPP21815 317 aaPredicted RBP12.23□□□□□ -0.45
SCAF4-203ENST00000434667 NEK1Q96PY6 1258 aa12.23□□□□□ -0.45
SCAF4-203ENST00000434667 ZSWIM4Q9H7M6 989 aa12.23□□□□□ -0.45
SCAF4-203ENST00000434667 DNAI1Q9UI46 699 aa12.23□□□□□ -0.45
SCAF4-203ENST00000434667 CLCN6P51797 869 aa12.23□□□□□ -0.45
SCAF4-203ENST00000434667 GPATCH3Q96I76 525 aa12.23□□□□□ -0.45
SCAF4-203ENST00000434667 KINO60870 393 aaKnown RBP12.23□□□□□ -0.45
SCAF4-203ENST00000434667 SLU7O95391 586 aaKnown RBP12.23□□□□□ -0.45
SCAF4-203ENST00000434667 PTPDC1A2A3K4 754 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 NDUFA8P51970 172 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 HAND2P61296 217 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 WNK3Q9BYP7 1800 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 ARFGEF2Q9Y6D5 1785 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 CAPN2P17655 700 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 ST5P78524 1137 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 RBM43Q6ZSC3 357 aaKnown RBP12.22□□□□□ -0.45
SCAF4-203ENST00000434667 PPP1R13BQ96KQ4 1090 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 NHSL1Q5SYE7 1610 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 ATP5J2-PTCD1G3V325 749 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 PTCD1O75127 700 aaKnown RBP12.22□□□□□ -0.45
SCAF4-203ENST00000434667 STX1AQ16623 288 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 ZNF530Q6P9A1 599 aaPredicted RBP12.22□□□□□ -0.45
SCAF4-203ENST00000434667 CCDC73Q6ZRK6 1079 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
SCAF4-203ENST00000434667 DPF2Q92785 391 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 DBNDD2Q9BQY9 259 aa12.22□□□□□ -0.45
SCAF4-203ENST00000434667 TFCP2Q12800 502 aa12.21□□□□□ -0.45
SCAF4-203ENST00000434667 DBNLQ9UJU6 430 aaKnown RBP12.21□□□□□ -0.45
SCAF4-203ENST00000434667 CLIC4Q9Y696 253 aa12.21□□□□□ -0.45
SCAF4-203ENST00000434667 MARCKSP29966 332 aaPredicted RBP12.21□□□□□ -0.45
SCAF4-203ENST00000434667 HNRNPH2P55795 449 aaKnown RBP12.21□□□□□ -0.45
SCAF4-203ENST00000434667 RNF20Q5VTR2 975 aa12.21□□□□□ -0.45
SCAF4-203ENST00000434667 CICQ96RK0 1608 aaPredicted RBP12.21□□□□□ -0.46
SCAF4-203ENST00000434667 GABPB1Q06547 395 aaPredicted RBP12.21□□□□□ -0.46
SCAF4-203ENST00000434667 HSP90AB4PQ58FF6 505 aa12.21□□□□□ -0.46
SCAF4-203ENST00000434667 NOL10Q9BSC4 688 aaKnown RBP12.21□□□□□ -0.46
SCAF4-203ENST00000434667 PCDHA7Q9UN72 937 aa12.21□□□□□ -0.46
SCAF4-203ENST00000434667 AMOTL2Q9Y2J4 779 aa12.21□□□□□ -0.46
SCAF4-203ENST00000434667 URI1O94763 535 aaPredicted RBP12.2□□□□□ -0.46
SCAF4-203ENST00000434667 KCNB2Q92953 911 aa12.2□□□□□ -0.46
SCAF4-203ENST00000434667 FHOD1Q9Y613 1164 aa12.2□□□□□ -0.46
SCAF4-203ENST00000434667 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.2□□□□□ -0.46
SCAF4-203ENST00000434667 NSUN7Q8NE18 718 aaKnown RBP12.2□□□□□ -0.46
SCAF4-203ENST00000434667 NEUROD6Q96NK8 337 aa12.2□□□□□ -0.46
SCAF4-203ENST00000434667 RXRAP19793 462 aa12.2□□□□□ -0.46
SCAF4-203ENST00000434667 PLA2G4AP47712 749 aa12.2□□□□□ -0.46
SCAF4-203ENST00000434667 ERO1AQ96HE7 468 aa12.2□□□□□ -0.46
SCAF4-203ENST00000434667 TMEM232C9JQI7 657 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 GRM8O00222 908 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 TFRCP02786 760 aaKnown RBP12.19□□□□□ -0.46
SCAF4-203ENST00000434667 PDILTQ8N807 584 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 CARD6Q9BX69 1037 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 RIC3Q7Z5B4 369 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 MNS1Q8NEH6 495 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 AIFM3Q96NN9 605 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 MYD88Q99836 296 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 ADGRL3Q9HAR2 1447 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 IGKV5-2P06315 115 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 SPECC1Q5M775 1068 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 MRFAP1L1Q96HT8 127 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 TBX22Q9Y458 520 aa12.19□□□□□ -0.46
SCAF4-203ENST00000434667 GOLIM4O00461 696 aa12.18□□□□□ -0.46
SCAF4-203ENST00000434667 ATP2B1P20020 1258 aa12.18□□□□□ -0.46
SCAF4-203ENST00000434667 TIMM10P62072 90 aa12.18□□□□□ -0.46
SCAF4-203ENST00000434667 UTP14AQ9BVJ6 771 aaKnown RBP12.18□□□□□ -0.46
SCAF4-203ENST00000434667 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
SCAF4-203ENST00000434667 DENND2AQ9ULE3 1009 aa12.18□□□□□ -0.46
SCAF4-203ENST00000434667 PES1O00541 588 aaKnown RBP12.18□□□□□ -0.46
SCAF4-203ENST00000434667 PNMA6AP0CW24 399 aaPredicted RBP12.18□□□□□ -0.46
SCAF4-203ENST00000434667 CEP57L1Q8IYX8 460 aa12.18□□□□□ -0.46
SCAF4-203ENST00000434667 CCDC85AQ96PX6 553 aaPredicted RBP12.18□□□□□ -0.46
SCAF4-203ENST00000434667 UBE2Q2LH0YL09 131 aa12.18□□□□□ -0.46
SCAF4-203ENST00000434667 ANKRD1Q15327 319 aa12.18□□□□□ -0.46
SCAF4-203ENST00000434667 ENGASEQ8NFI3 743 aa12.18□□□□□ -0.46
SCAF4-203ENST00000434667 TRIM34Q9BYJ4 488 aa12.18□□□□□ -0.46
SCAF4-203ENST00000434667 CFAP45Q9UL16 551 aa12.18□□□□□ -0.46
SCAF4-203ENST00000434667 USP42Q9H9J4 1324 aaKnown RBP12.18□□□□□ -0.46
SCAF4-203ENST00000434667 KSR2Q6VAB6 950 aa12.17□□□□□ -0.46
SCAF4-203ENST00000434667 IRX2Q9BZI1 471 aaPredicted RBP12.17□□□□□ -0.46
SCAF4-203ENST00000434667 A0A0U1RQJ8 604 aa12.17□□□□□ -0.46
SCAF4-203ENST00000434667 EPB41L2O43491 1005 aaKnown RBP12.17□□□□□ -0.46
SCAF4-203ENST00000434667 SASH3O75995 380 aa12.17□□□□□ -0.46
SCAF4-203ENST00000434667 ATRIPQ8WXE1 791 aa12.17□□□□□ -0.46
SCAF4-203ENST00000434667 TIGD1Q96MW7 591 aa12.17□□□□□ -0.46
SCAF4-203ENST00000434667 ANO10Q9NW15 660 aa12.17□□□□□ -0.46
SCAF4-203ENST00000434667 ZNF609O15014 1411 aa12.17□□□□□ -0.46
SCAF4-203ENST00000434667 ANKRD65E5RJM6 399 aa12.17□□□□□ -0.46
SCAF4-203ENST00000434667 SFPQP23246 707 aaKnown RBP eCLIP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms