RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZNF396Q96N95 335 aaPredicted RBP12.27□□□□□ -0.44
CD44-210ENST00000434472 TNMDQ9H2S6 317 aa12.27□□□□□ -0.44
CD44-210ENST00000434472 TOGARAM1Q9Y4F4 1720 aa12.27□□□□□ -0.45
CD44-210ENST00000434472 GOLGA6L6A8MZA4 724 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 LIG1P18858 919 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 RBM43Q6ZSC3 357 aaKnown RBP12.26□□□□□ -0.45
CD44-210ENST00000434472 APPBP2Q92624 585 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 ZNF512BQ96KM6 892 aaPredicted RBP12.26□□□□□ -0.45
CD44-210ENST00000434472 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.26□□□□□ -0.45
CD44-210ENST00000434472 TFIP11Q9UBB9 837 aaKnown RBP12.26□□□□□ -0.45
CD44-210ENST00000434472 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.26□□□□□ -0.45
CD44-210ENST00000434472 NHSL1Q5SYE7 1610 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 WDR19Q8NEZ3 1342 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 PTPDC1A2A3K4 754 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 M0R2C6 588 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 CTAGE5O15320 804 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 CHGBP05060 677 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 EVCP57679 992 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 FKBP4Q02790 459 aaKnown RBP eCLIP12.26□□□□□ -0.45
CD44-210ENST00000434472 TYRO3Q06418 890 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 APOBRQ0VD83 1088 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 TTF1Q15361 905 aaPredicted RBP12.26□□□□□ -0.45
CD44-210ENST00000434472 ATP2B3Q16720 1220 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 FAM173BQ6P4H8 233 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 RGS22Q8NE09 1264 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 BICD2Q8TD16 824 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 PIGBQ92521 554 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 DACT1Q9NYF0 836 aa12.26□□□□□ -0.45
CD44-210ENST00000434472 LRP6O75581 1613 aa12.25□□□□□ -0.45
CD44-210ENST00000434472 ANKRD18BA2A2Z9 1011 aa12.25□□□□□ -0.45
CD44-210ENST00000434472 DHX16O60231 1041 aaKnown RBP12.25□□□□□ -0.45
CD44-210ENST00000434472 DTNBO60941 627 aa12.25□□□□□ -0.45
CD44-210ENST00000434472 SASS6Q6UVJ0 657 aa12.25□□□□□ -0.45
CD44-210ENST00000434472 OSBP2Q969R2 916 aa12.25□□□□□ -0.45
CD44-210ENST00000434472 DDX11Q96FC9 970 aa12.25□□□□□ -0.45
CD44-210ENST00000434472 LRRC2Q9BYS8 371 aa12.25□□□□□ -0.45
CD44-210ENST00000434472 RCOR1Q9UKL0 485 aa12.25□□□□□ -0.45
CD44-210ENST00000434472 ASAP1Q9ULH1 1129 aa12.25□□□□□ -0.45
CD44-210ENST00000434472 ZNF330Q9Y3S2 320 aaPredicted RBP12.25□□□□□ -0.45
CD44-210ENST00000434472 LAMA4Q16363 1823 aa12.24□□□□□ -0.45
CD44-210ENST00000434472 PDIA3P30101 505 aaKnown RBP12.24□□□□□ -0.45
CD44-210ENST00000434472 METTL24Q5JXM2 366 aa12.24□□□□□ -0.45
CD44-210ENST00000434472 NLRP10Q86W26 655 aa12.24□□□□□ -0.45
CD44-210ENST00000434472 FAM89AQ96GI7 184 aa12.24□□□□□ -0.45
CD44-210ENST00000434472 MRVI1Q9Y6F6 885 aa12.24□□□□□ -0.45
CD44-210ENST00000434472 STRCQ7RTU9 1775 aa12.24□□□□□ -0.45
CD44-210ENST00000434472 ERVV-1B6SEH8 477 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 CTDNEP1O95476 244 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 UQCRFS1P1P0C7P4 283 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 ADORA1P30542 326 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 ZAP70P43403 619 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 LDHAL6AQ6ZMR3 332 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 NCOA7Q8NI08 942 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 PIBF1Q8WXW3 757 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 PGBD1Q96JS3 809 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 AK7Q96M32 723 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 R3HCC1Q9Y3T6 440 aaKnown RBP12.23□□□□□ -0.45
CD44-210ENST00000434472 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 ZNF335Q9H4Z2 1342 aaPredicted RBP12.23□□□□□ -0.45
CD44-210ENST00000434472 SALL1Q9NSC2 1324 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 DISP2A7MBM2 1401 aa12.23□□□□□ -0.45
CD44-210ENST00000434472 PDE8AO60658 829 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 CYP19A1P11511 503 aaPredicted RBP12.22□□□□□ -0.45
CD44-210ENST00000434472 CTSWP56202 376 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
CD44-210ENST00000434472 TTLL11Q8NHH1 800 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 CNNM1Q9NRU3 951 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 BCL9O00512 1426 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 RIC1Q4ADV7 1423 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 COL14A1Q05707 1796 aaKnown RBP12.22□□□□□ -0.45
CD44-210ENST00000434472 IRS4O14654 1257 aaPredicted RBP12.22□□□□□ -0.45
CD44-210ENST00000434472 ZNF213O14771 459 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 PRC1O43663 620 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 RRP9O43818 475 aaKnown RBP12.22□□□□□ -0.45
CD44-210ENST00000434472 ITGA6P23229 1130 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 CCT2P78371 535 aaKnown RBP12.22□□□□□ -0.45
CD44-210ENST00000434472 CAMK4Q16566 473 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 SLFNL1Q499Z3 407 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 CCDC73Q6ZRK6 1079 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 BTG4Q9NY30 223 aa12.22□□□□□ -0.45
CD44-210ENST00000434472 NAP1L2Q9ULW6 460 aaPredicted RBP12.22□□□□□ -0.45
CD44-210ENST00000434472 FGAP02671 866 aa12.21□□□□□ -0.46
CD44-210ENST00000434472 ADD1P35611 737 aaKnown RBP12.21□□□□□ -0.46
CD44-210ENST00000434472 ADD2P35612 726 aa12.21□□□□□ -0.46
CD44-210ENST00000434472 IL6STP40189 918 aaPredicted RBP12.21□□□□□ -0.46
CD44-210ENST00000434472 PLCB2Q00722 1185 aa12.21□□□□□ -0.46
CD44-210ENST00000434472 UBE3CQ15386 1083 aa12.21□□□□□ -0.46
CD44-210ENST00000434472 ANO6Q4KMQ2 910 aa12.21□□□□□ -0.46
CD44-210ENST00000434472 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.21□□□□□ -0.46
CD44-210ENST00000434472 MB21D2Q8IYB1 491 aaPredicted RBP12.21□□□□□ -0.46
CD44-210ENST00000434472 TDRD7Q8NHU6 1098 aaKnown RBP12.21□□□□□ -0.46
CD44-210ENST00000434472 TBC1D2BQ9UPU7 963 aa12.21□□□□□ -0.46
CD44-210ENST00000434472 ATRNO75882 1429 aa12.21□□□□□ -0.46
CD44-210ENST00000434472 ANKRD36CQ5JPF3 1778 aa12.21□□□□□ -0.46
CD44-210ENST00000434472 CARMIL3Q8ND23 1372 aa12.2□□□□□ -0.46
CD44-210ENST00000434472 MROH5Q6ZUA9 1318 aa12.2□□□□□ -0.46
CD44-210ENST00000434472 EXOC5O00471 708 aa12.2□□□□□ -0.46
CD44-210ENST00000434472 GPAA1O43292 621 aa12.2□□□□□ -0.46
CD44-210ENST00000434472 NR1I2O75469 434 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms