RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 C16orf71Q8IYS4 520 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-208ENST00000430669 CARD10Q9BWT7 1032 aa13.34□□□□□ -0.27
PTCH1-208ENST00000430669 GCKRQ14397 625 aa13.33□□□□□ -0.27
PTCH1-208ENST00000430669 DHX32Q7L7V1 743 aaKnown RBP13.33□□□□□ -0.27
PTCH1-208ENST00000430669 GTPBP4Q9BZE4 634 aaKnown RBP13.33□□□□□ -0.27
PTCH1-208ENST00000430669 RGPD8O14715 1765 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-208ENST00000430669 RTN1Q16799 776 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 NLRP5P59047 1200 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 SLC9C2Q5TAH2 1124 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 CNNM3Q8NE01 707 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 TSG101Q99816 390 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 DENND2AQ9ULE3 1009 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 NEURL1BA8MQ27 555 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 HSP90B2PQ58FF3 399 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 G2E3Q7L622 706 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 EYA2O00167 538 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 ESPNB1AK53 854 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 BRAPQ7Z569 592 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 ORC3Q9UBD5 711 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-208ENST00000430669 LGR6Q9HBX8 967 aa13.33□□□□□ -0.28
PTCH1-208ENST00000430669 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-208ENST00000430669 LRSAM1Q6UWE0 723 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 C6orf229H3BNL8 230 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 SLC4A4Q9Y6R1 1079 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 CYP7A1P22680 504 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 PA2G4Q9UQ80 394 aaKnown RBP13.32□□□□□ -0.28
PTCH1-208ENST00000430669 CALML3P27482 149 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 FSIP1Q8NA03 581 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 TCP11L1Q9NUJ3 509 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 MICU3Q86XE3 530 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 ATP10DQ9P241 1426 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 MYO1BO43795 1136 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 TSPY3P0CV98 308 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 TSPY8P0CW00 308 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 HSPA2P54652 639 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 ARHGEF25Q86VW2 580 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 ACSBG1Q96GR2 724 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 RMND1Q9NWS8 449 aa13.32□□□□□ -0.28
PTCH1-208ENST00000430669 SH3TC1Q8TE82 1336 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 ZSCAN12O43309 604 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 ZSCAN23Q3MJ62 389 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 TNNQ9UQP3 1299 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 USP31Q70CQ4 1352 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 TICAM2Q86XR7 235 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 CALML4Q96GE6 196 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 F13A1P00488 732 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 FERMT3Q86UX7 667 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 FAM114A1Q8IWE2 563 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 PXDNLA1KZ92 1463 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 SFPQP23246 707 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTCH1-208ENST00000430669 CAMK4Q16566 473 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
PTCH1-208ENST00000430669 KLF18A0A0U1RQI7 1052 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 ZNF853P0CG23 659 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 TECPR2O15040 1411 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 NBPF7P0C2Y1 421 aaPredicted RBP13.3□□□□□ -0.28
PTCH1-208ENST00000430669 CFAP100Q494V2 611 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 MAGEB6Q8N7X4 407 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 RPS6KB1P23443 525 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 RBM17Q96I25 401 aaKnown RBP13.3□□□□□ -0.28
PTCH1-208ENST00000430669 IL17REQ8NFR9 667 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 ITGA6P23229 1130 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 AK2P54819 239 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 SLC26A6Q9BXS9 759 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 SNRKQ9NRH2 765 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
PTCH1-208ENST00000430669 A0A1B0GUL7 405 aa13.29□□□□□ -0.28
PTCH1-208ENST00000430669 PPP2R5BQ15173 497 aa13.29□□□□□ -0.28
PTCH1-208ENST00000430669 CCDC96Q2M329 555 aa13.29□□□□□ -0.28
PTCH1-208ENST00000430669 FKBP15Q5T1M5 1219 aa13.29□□□□□ -0.28
PTCH1-208ENST00000430669 GOLGA6L9A6NEM1 432 aa13.29□□□□□ -0.28
PTCH1-208ENST00000430669 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.29□□□□□ -0.28
PTCH1-208ENST00000430669 SGSM2O43147 1006 aa13.29□□□□□ -0.28
PTCH1-208ENST00000430669 TRAPPC3LQ5T215 181 aa13.29□□□□□ -0.28
PTCH1-208ENST00000430669 TMEM87BQ96K49 555 aa13.29□□□□□ -0.28
PTCH1-208ENST00000430669 HAND2P61296 217 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 CCDC102BQ68D86 513 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 CCDC112Q8NEF3 446 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 ALG1Q9BT22 464 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 PRC1O43663 620 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 DNAI2Q9GZS0 605 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 PPP1R1BQ9UD71 204 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-208ENST00000430669 APPBP2Q92624 585 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 PRR36Q9H6K5 1346 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 KBTBD3Q8NAB2 608 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 LPIN2Q92539 896 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 BRF1Q92994 677 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 BRPF3Q9ULD4 1205 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 ATP5JP18859 108 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 TM6SF1Q9BZW5 370 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 CCDC87Q9NVE4 849 aa13.28□□□□□ -0.28
PTCH1-208ENST00000430669 CTAGE1Q96RT6 745 aa13.27□□□□□ -0.28
PTCH1-208ENST00000430669 EYA3Q99504 573 aa13.27□□□□□ -0.28
PTCH1-208ENST00000430669 CABP5Q9NP86 173 aa13.27□□□□□ -0.28
PTCH1-208ENST00000430669 THRAP3Q9Y2W1 955 aaKnown RBP13.27□□□□□ -0.28
PTCH1-208ENST00000430669 PNMA6EA0A0J9YXQ4 647 aa13.27□□□□□ -0.28
PTCH1-208ENST00000430669 ERLIN2O94905 339 aa13.27□□□□□ -0.28
PTCH1-208ENST00000430669 ZBTB38Q8NAP3 1195 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms