RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 PPFIBP1Q86W92 1011 aa19.77■□□□□ 0.76
SMARCA4-203ENST00000429416 AATFQ9NY61 560 aaKnown RBP eCLIP19.77■□□□□ 0.76
SMARCA4-203ENST00000429416 NPC1L1Q9UHC9 1359 aa19.77■□□□□ 0.76
SMARCA4-203ENST00000429416 NUP62CLQ9H1M0 184 aa19.77■□□□□ 0.76
SMARCA4-203ENST00000429416 TTC41PQ6P2S7 1318 aa19.77■□□□□ 0.76
SMARCA4-203ENST00000429416 TNNI3KQ59H18 835 aa19.77■□□□□ 0.76
SMARCA4-203ENST00000429416 FPGT-TNNI3KV9GXZ4 949 aa19.77■□□□□ 0.76
SMARCA4-203ENST00000429416 PANK2Q9BZ23 570 aa19.77■□□□□ 0.75
SMARCA4-203ENST00000429416 B4DLN1 442 aa19.76■□□□□ 0.75
SMARCA4-203ENST00000429416 MRPL12P52815 198 aaKnown RBP19.76■□□□□ 0.75
SMARCA4-203ENST00000429416 CA8P35219 290 aa19.76■□□□□ 0.75
SMARCA4-203ENST00000429416 CALML4Q96GE6 196 aa19.76■□□□□ 0.75
SMARCA4-203ENST00000429416 SH2D4AQ9H788 454 aa19.76■□□□□ 0.75
SMARCA4-203ENST00000429416 A2ML1A8K2U0 1454 aa19.76■□□□□ 0.75
SMARCA4-203ENST00000429416 SERPINB2P05120 415 aa19.76■□□□□ 0.75
SMARCA4-203ENST00000429416 CTSWP56202 376 aa19.76■□□□□ 0.75
SMARCA4-203ENST00000429416 UBA7P41226 1012 aa19.76■□□□□ 0.75
SMARCA4-203ENST00000429416 THRAP3Q9Y2W1 955 aaKnown RBP19.76■□□□□ 0.75
SMARCA4-203ENST00000429416 PRC1O43663 620 aa19.75■□□□□ 0.75
SMARCA4-203ENST00000429416 CAMK4Q16566 473 aa19.75■□□□□ 0.75
SMARCA4-203ENST00000429416 ARMT1Q9H993 441 aa19.75■□□□□ 0.75
SMARCA4-203ENST00000429416 RIMBP3CA6NJZ7 1639 aa19.75■□□□□ 0.75
SMARCA4-203ENST00000429416 RIMBP3BA6NNM3 1639 aa19.75■□□□□ 0.75
SMARCA4-203ENST00000429416 RIMBP3Q9UFD9 1639 aa19.75■□□□□ 0.75
SMARCA4-203ENST00000429416 CAGE1Q8TC20 777 aa19.75■□□□□ 0.75
SMARCA4-203ENST00000429416 NASPP49321 788 aaPredicted RBP19.75■□□□□ 0.75
SMARCA4-203ENST00000429416 DCTPP1Q9H773 170 aa19.75■□□□□ 0.75
SMARCA4-203ENST00000429416 TTF2Q9UNY4 1162 aaKnown RBP19.75■□□□□ 0.75
SMARCA4-203ENST00000429416 GCC2Q8IWJ2 1684 aa19.75■□□□□ 0.75
SMARCA4-203ENST00000429416 FAM135BQ49AJ0 1406 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 NEURL1BA8MQ27 555 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 MFSD14BQ5SR56 506 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 NECAB1Q8N987 351 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 ZKSCAN3Q9BRR0 538 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 GJB2P29033 226 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 SPDYE3A6NKU9 549 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 MROH5Q6ZUA9 1318 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 CCDC148Q8NFR7 591 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 SP4Q02446 784 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 KIAA0825Q8IV33 1275 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 HOOK2Q96ED9 719 aa19.74■□□□□ 0.75
SMARCA4-203ENST00000429416 EIF5P55010 431 aaKnown RBP19.73■□□□□ 0.75
SMARCA4-203ENST00000429416 ESYT1Q9BSJ8 1104 aa19.73■□□□□ 0.75
SMARCA4-203ENST00000429416 TFIP11Q9UBB9 837 aaKnown RBP19.73■□□□□ 0.75
SMARCA4-203ENST00000429416 SPC24Q8NBT2 197 aa19.73■□□□□ 0.75
SMARCA4-203ENST00000429416 IVNS1ABPQ9Y6Y0 642 aa19.73■□□□□ 0.75
SMARCA4-203ENST00000429416 ANKARQ7Z5J8 1434 aa19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 RRP36Q96EU6 259 aaKnown RBP19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 MAP3K15Q6ZN16 1313 aa19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 RDXP35241 583 aaKnown RBP19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 ARAP3Q8WWN8 1544 aa19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 CALM1P0DP23 149 aa19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 CALM2P0DP24 149 aa19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 CALM3P0DP25 149 aa19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 Q6ZUG5 572 aa19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 SCAND2PQ9GZW5 306 aaPredicted RBP19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 TBC1D22AQ8WUA7 517 aa19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 PIGBQ92521 554 aa19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 TSG101Q99816 390 aa19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 ZBTB40Q9NUA8 1239 aa19.72■□□□□ 0.75
SMARCA4-203ENST00000429416 ARHGEF10LQ9HCE6 1279 aa19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 IL6STP40189 918 aaPredicted RBP19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 MAPKAPK5Q8IW41 473 aa19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 ALG1Q9BT22 464 aa19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 PRDM1O75626 825 aa19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 SPATA31E1Q6ZUB1 1445 aa19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 GJD4Q96KN9 370 aaPredicted RBP19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 ZBTB7AO95365 584 aa19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 ZBTB38Q8NAP3 1195 aaPredicted RBP19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 DNAI2Q9GZS0 605 aa19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 GPCPD1Q9NPB8 672 aa19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 NDUFB9Q9Y6M9 179 aa19.71■□□□□ 0.75
SMARCA4-203ENST00000429416 LUC7LQ9NQ29 371 aaKnown RBP19.7■□□□□ 0.74
SMARCA4-203ENST00000429416 SYCP3Q8IZU3 236 aa19.7■□□□□ 0.74
SMARCA4-203ENST00000429416 DESP17661 470 aa19.7■□□□□ 0.74
SMARCA4-203ENST00000429416 SCNN1DP51172 638 aa19.7■□□□□ 0.74
SMARCA4-203ENST00000429416 SPATA5Q8NB90 893 aa19.7■□□□□ 0.74
SMARCA4-203ENST00000429416 BICD1Q96G01 975 aa19.7■□□□□ 0.74
SMARCA4-203ENST00000429416 SRP68Q9UHB9 627 aaKnown RBP19.7■□□□□ 0.74
SMARCA4-203ENST00000429416 RXRAP19793 462 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 SULF1Q8IWU6 871 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 CNNM3Q8NE01 707 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 SSR1P43307 286 aaKnown RBP19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 GYG1P46976 350 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 CCDC171Q6TFL3 1326 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 ADCY10Q96PN6 1610 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 ERMNQ8TAM6 284 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 TEKT1Q969V4 418 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 CSADQ9Y600 493 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 MMP10P09238 476 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 ATP2B4P23634 1241 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 MNS1Q8NEH6 495 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 ZBTB7BO15156 539 aaPredicted RBP19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 SMCR8Q8TEV9 937 aaPredicted RBP19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 DCPSQ96C86 337 aaKnown RBP19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 C6orf50Q9HD87 102 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 USP40Q9NVE5 1235 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 JCADQ9P266 1359 aa19.69■□□□□ 0.74
SMARCA4-203ENST00000429416 TGFBRAP1Q8WUH2 860 aa19.68■□□□□ 0.74
SMARCA4-203ENST00000429416 CCDC129Q6ZRS4 1044 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms