RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 IL15P40933 162 aaPredicted RBP28.11■■■□□ 2.09
SDHAP1-204ENST00000427415 ATP8B2P98198 1209 aa28.11■■■□□ 2.09
SDHAP1-204ENST00000427415 VGLL2Q8N8G2 317 aa28.11■■■□□ 2.09
SDHAP1-204ENST00000427415 SNAP23O00161 211 aa28.1■■■□□ 2.09
SDHAP1-204ENST00000427415 ATG9AQ7Z3C6 839 aa28.1■■■□□ 2.09
SDHAP1-204ENST00000427415 PODNQ7Z5L7 613 aa28.1■■■□□ 2.09
SDHAP1-204ENST00000427415 TXNRD3Q86VQ6 643 aa28.1■■■□□ 2.09
SDHAP1-204ENST00000427415 KIF3CO14782 793 aa28.09■■■□□ 2.09
SDHAP1-204ENST00000427415 ZNF804AQ7Z570 1209 aa28.09■■■□□ 2.09
SDHAP1-204ENST00000427415 C16orf71Q8IYS4 520 aaPredicted RBP28.09■■■□□ 2.09
SDHAP1-204ENST00000427415 ZBTB40Q9NUA8 1239 aa28.09■■■□□ 2.09
SDHAP1-204ENST00000427415 IRS2Q9Y4H2 1338 aa28.09■■■□□ 2.09
SDHAP1-204ENST00000427415 POLA2Q14181 598 aa28.08■■■□□ 2.09
SDHAP1-204ENST00000427415 PUM3Q15397 648 aaKnown RBP28.08■■■□□ 2.09
SDHAP1-204ENST00000427415 SSH3Q8TE77 659 aa28.08■■■□□ 2.09
SDHAP1-204ENST00000427415 CEP126Q9P2H0 1117 aa28.08■■■□□ 2.09
SDHAP1-204ENST00000427415 LMOD1P29536 600 aaPredicted RBP28.07■■■□□ 2.08
SDHAP1-204ENST00000427415 CEP85Q6P2H3 762 aa28.07■■■□□ 2.08
SDHAP1-204ENST00000427415 HACL1Q9UJ83 578 aa28.07■■■□□ 2.08
SDHAP1-204ENST00000427415 POTECB2RU33 542 aa28.06■■■□□ 2.08
SDHAP1-204ENST00000427415 PSMD14O00487 310 aa28.06■■■□□ 2.08
SDHAP1-204ENST00000427415 IFIT1P09914 478 aaKnown RBP28.05■■■□□ 2.08
SDHAP1-204ENST00000427415 ZNF646O15015 1829 aaPredicted RBP28.04■■■□□ 2.08
SDHAP1-204ENST00000427415 SLC5A1P13866 664 aa28.04■■■□□ 2.08
SDHAP1-204ENST00000427415 G3BP1Q13283 466 aaKnown RBP eCLIP28.04■■■□□ 2.08
SDHAP1-204ENST00000427415 KCNQ5Q9NR82 932 aa28.04■■■□□ 2.08
SDHAP1-204ENST00000427415 ARAP2Q8WZ64 1704 aa28.04■■■□□ 2.08
SDHAP1-204ENST00000427415 MYH13Q9UKX3 1938 aa28.03■■■□□ 2.08
SDHAP1-204ENST00000427415 USP17L3A6NCW0 530 aa28.03■■■□□ 2.08
SDHAP1-204ENST00000427415 USP17L4A6NCW7 530 aa28.03■■■□□ 2.08
SDHAP1-204ENST00000427415 GMPSP49915 693 aaPredicted RBP28.03■■■□□ 2.08
SDHAP1-204ENST00000427415 SCNN1DP51172 638 aa28.03■■■□□ 2.08
SDHAP1-204ENST00000427415 USP17L1Q7RTZ2 530 aa28.03■■■□□ 2.08
SDHAP1-204ENST00000427415 CD209Q9NNX6 404 aa28.03■■■□□ 2.08
SDHAP1-204ENST00000427415 VIL1P09327 827 aaKnown RBP28.02■■■□□ 2.08
SDHAP1-204ENST00000427415 FGFR2P21802 821 aa28.02■■■□□ 2.08
SDHAP1-204ENST00000427415 RPS12P25398 132 aaKnown RBP28.02■■■□□ 2.08
SDHAP1-204ENST00000427415 ATP2B3Q16720 1220 aa28.02■■■□□ 2.08
SDHAP1-204ENST00000427415 CAVIN4Q5BKX8 364 aa28.02■■■□□ 2.08
SDHAP1-204ENST00000427415 RPAP2Q8IXW5 612 aaPredicted RBP28.02■■■□□ 2.08
SDHAP1-204ENST00000427415 LPIN2Q92539 896 aa28.02■■■□□ 2.08
SDHAP1-204ENST00000427415 ZNF609O15014 1411 aa28.01■■■□□ 2.08
SDHAP1-204ENST00000427415 HIBADHP31937 336 aaKnown RBP28.01■■■□□ 2.07
SDHAP1-204ENST00000427415 VPS37DQ86XT2 251 aa28.01■■■□□ 2.07
SDHAP1-204ENST00000427415 TAF1DQ9H5J8 278 aaPredicted RBP28.01■■■□□ 2.07
SDHAP1-204ENST00000427415 GPRC5DQ9NZD1 345 aa28.01■■■□□ 2.07
SDHAP1-204ENST00000427415 HMMRO75330 724 aa28■■■□□ 2.07
SDHAP1-204ENST00000427415 TOMM70O94826 608 aa28■■■□□ 2.07
SDHAP1-204ENST00000427415 IL1R1P14778 569 aa28■■■□□ 2.07
SDHAP1-204ENST00000427415 EPHX2P34913 555 aa28■■■□□ 2.07
SDHAP1-204ENST00000427415 GYG1P46976 350 aa28■■■□□ 2.07
SDHAP1-204ENST00000427415 OS9Q13438 667 aaPredicted RBP28■■■□□ 2.07
SDHAP1-204ENST00000427415 STRIP1Q5VSL9 837 aa28■■■□□ 2.07
SDHAP1-204ENST00000427415 FBXW7Q969H0 707 aa28■■■□□ 2.07
SDHAP1-204ENST00000427415 SURF6O75683 361 aaKnown RBP27.99■■■□□ 2.07
SDHAP1-204ENST00000427415 RSBN1LQ6PCB5 846 aaPredicted RBP27.99■■■□□ 2.07
SDHAP1-204ENST00000427415 DPF2Q92785 391 aa27.99■■■□□ 2.07
SDHAP1-204ENST00000427415 FAM84BQ96KN1 310 aaPredicted RBP27.99■■■□□ 2.07
SDHAP1-204ENST00000427415 AKAP2Q9Y2D5 859 aa27.99■■■□□ 2.07
SDHAP1-204ENST00000427415 ZBTB12Q9Y330 459 aaPredicted RBP27.99■■■□□ 2.07
SDHAP1-204ENST00000427415 TFCP2Q12800 502 aa27.98■■■□□ 2.07
SDHAP1-204ENST00000427415 PNMA8AQ86V59 439 aaPredicted RBP27.98■■■□□ 2.07
SDHAP1-204ENST00000427415 AGBL3Q8NEM8 1001 aa27.98■■■□□ 2.07
SDHAP1-204ENST00000427415 RBM46Q8TBY0 533 aaKnown RBP27.98■■■□□ 2.07
SDHAP1-204ENST00000427415 NOP58Q9Y2X3 529 aaKnown RBP27.98■■■□□ 2.07
SDHAP1-204ENST00000427415 MYO3BQ8WXR4 1341 aa27.97■■■□□ 2.07
SDHAP1-204ENST00000427415 EPS15P42566 896 aa27.97■■■□□ 2.07
SDHAP1-204ENST00000427415 TTLL5Q6EMB2 1281 aa27.97■■■□□ 2.07
SDHAP1-204ENST00000427415 GTF2IP78347 998 aa27.96■■■□□ 2.07
SDHAP1-204ENST00000427415 DACT2Q5SW24 774 aa27.96■■■□□ 2.07
SDHAP1-204ENST00000427415 FBXO33Q7Z6M2 555 aa27.96■■■□□ 2.07
SDHAP1-204ENST00000427415 ADARB2Q9NS39 739 aaKnown RBP27.96■■■□□ 2.07
SDHAP1-204ENST00000427415 CNOT7Q9UIV1 285 aaKnown RBP27.96■■■□□ 2.07
SDHAP1-204ENST00000427415 H7C1D1 291 aa27.95■■■□□ 2.06
SDHAP1-204ENST00000427415 EAPPQ56P03 285 aaPredicted RBP27.95■■■□□ 2.06
SDHAP1-204ENST00000427415 MICALL2Q8IY33 904 aa27.95■■■□□ 2.06
SDHAP1-204ENST00000427415 TDRD7Q8NHU6 1098 aaKnown RBP27.95■■■□□ 2.06
SDHAP1-204ENST00000427415 ADAMTSL1Q8N6G6 1762 aa27.94■■■□□ 2.06
SDHAP1-204ENST00000427415 HSP90AB4PQ58FF6 505 aa27.94■■■□□ 2.06
SDHAP1-204ENST00000427415 ERC1Q8IUD2 1116 aa27.94■■■□□ 2.06
SDHAP1-204ENST00000427415 CRBNQ96SW2 442 aa27.94■■■□□ 2.06
SDHAP1-204ENST00000427415 FRAT2O75474 233 aaPredicted RBP27.93■■■□□ 2.06
SDHAP1-204ENST00000427415 SASH1O94885 1247 aa27.93■■■□□ 2.06
SDHAP1-204ENST00000427415 USP50Q70EL3 339 aaPredicted RBP27.93■■■□□ 2.06
SDHAP1-204ENST00000427415 SMC1BQ8NDV3 1235 aa27.93■■■□□ 2.06
SDHAP1-204ENST00000427415 SUPT16HQ9Y5B9 1047 aaKnown RBP27.93■■■□□ 2.06
SDHAP1-204ENST00000427415 A0A1B0GUL7 405 aa27.92■■■□□ 2.06
SDHAP1-204ENST00000427415 BCAMP50895 628 aa27.92■■■□□ 2.06
SDHAP1-204ENST00000427415 LDHDQ86WU2 507 aa27.92■■■□□ 2.06
SDHAP1-204ENST00000427415 SIRT2Q8IXJ6 389 aa27.92■■■□□ 2.06
SDHAP1-204ENST00000427415 GMLQ99445 158 aa27.92■■■□□ 2.06
SDHAP1-204ENST00000427415 FAM205AQ6ZU69 1335 aa27.92■■■□□ 2.06
SDHAP1-204ENST00000427415 FKBP1AP62942 108 aaKnown RBP27.91■■■□□ 2.06
SDHAP1-204ENST00000427415 GPR108Q9NPR9 543 aa27.91■■■□□ 2.06
SDHAP1-204ENST00000427415 EXOC6BQ9Y2D4 811 aa27.91■■■□□ 2.06
SDHAP1-204ENST00000427415 C1QTNF8P60827 252 aa27.9■■■□□ 2.06
SDHAP1-204ENST00000427415 FSTL1Q12841 308 aa27.9■■■□□ 2.06
SDHAP1-204ENST00000427415 GNL3LQ9NVN8 582 aaKnown RBP27.9■■■□□ 2.06
SDHAP1-204ENST00000427415 USP17L8P0C7I0 530 aa27.89■■■□□ 2.06
SDHAP1-204ENST00000427415 TIMM10P62072 90 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms