RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 RABL6Q3YEC7 729 aaPredicted RBP16.88■□□□□ 0.29
ERCC3-202ENST00000426778 ILDR1Q86SU0 546 aaPredicted RBP16.88■□□□□ 0.29
ERCC3-202ENST00000426778 FSIP1Q8NA03 581 aa16.88■□□□□ 0.29
ERCC3-202ENST00000426778 TDRD7Q8NHU6 1098 aaKnown RBP16.88■□□□□ 0.29
ERCC3-202ENST00000426778 AFDNP55196 1824 aaKnown RBP16.87■□□□□ 0.29
ERCC3-202ENST00000426778 BIN1O00499 593 aa16.87■□□□□ 0.29
ERCC3-202ENST00000426778 IFIT1P09914 478 aaKnown RBP16.87■□□□□ 0.29
ERCC3-202ENST00000426778 CFAP45Q9UL16 551 aa16.87■□□□□ 0.29
ERCC3-202ENST00000426778 SIPA1L3O60292 1781 aaPredicted RBP16.87■□□□□ 0.29
ERCC3-202ENST00000426778 MAST3O60307 1309 aa16.87■□□□□ 0.29
ERCC3-202ENST00000426778 PFKFB2O60825 505 aa16.87■□□□□ 0.29
ERCC3-202ENST00000426778 ADORA1P30542 326 aa16.87■□□□□ 0.29
ERCC3-202ENST00000426778 GTF2F1P35269 517 aaKnown RBP eCLIP16.87■□□□□ 0.29
ERCC3-202ENST00000426778 CASP7P55210 303 aa16.87■□□□□ 0.29
ERCC3-202ENST00000426778 WASHC4Q2M389 1173 aa16.87■□□□□ 0.29
ERCC3-202ENST00000426778 RBM43Q6ZSC3 357 aaKnown RBP16.87■□□□□ 0.29
ERCC3-202ENST00000426778 PDCL2Q8N4E4 241 aa16.87■□□□□ 0.29
ERCC3-202ENST00000426778 ALDH8A1Q9H2A2 487 aaPredicted RBP16.87■□□□□ 0.29
ERCC3-202ENST00000426778 DENND2AQ9ULE3 1009 aa16.87■□□□□ 0.29
ERCC3-202ENST00000426778 A0A1B0GUL7 405 aa16.86■□□□□ 0.29
ERCC3-202ENST00000426778 BECN2A8MW95 431 aa16.86■□□□□ 0.29
ERCC3-202ENST00000426778 SMARCC2Q8TAQ2 1214 aa16.86■□□□□ 0.29
ERCC3-202ENST00000426778 SNW1Q13573 536 aaKnown RBP16.86■□□□□ 0.29
ERCC3-202ENST00000426778 IQCB1Q15051 598 aa16.86■□□□□ 0.29
ERCC3-202ENST00000426778 OSBP2Q969R2 916 aa16.86■□□□□ 0.29
ERCC3-202ENST00000426778 PDIA3P30101 505 aaKnown RBP16.86■□□□□ 0.29
ERCC3-202ENST00000426778 CCDC73Q6ZRK6 1079 aa16.86■□□□□ 0.29
ERCC3-202ENST00000426778 AOPEPQ8N6M6 819 aa16.86■□□□□ 0.29
ERCC3-202ENST00000426778 RXRAP19793 462 aa16.85■□□□□ 0.29
ERCC3-202ENST00000426778 MTERF4Q7Z6M4 381 aaKnown RBP16.85■□□□□ 0.29
ERCC3-202ENST00000426778 KINO60870 393 aaKnown RBP16.85■□□□□ 0.29
ERCC3-202ENST00000426778 PTPN21Q16825 1174 aa16.85■□□□□ 0.29
ERCC3-202ENST00000426778 SYNE4Q8N205 404 aa16.85■□□□□ 0.29
ERCC3-202ENST00000426778 PLBD2Q8NHP8 589 aa16.85■□□□□ 0.29
ERCC3-202ENST00000426778 ZSCAN16Q9H4T2 348 aaPredicted RBP16.85■□□□□ 0.29
ERCC3-202ENST00000426778 LAMA4Q16363 1823 aa16.85■□□□□ 0.29
ERCC3-202ENST00000426778 FDPSP14324 419 aaKnown RBP16.84■□□□□ 0.29
ERCC3-202ENST00000426778 SCARF1Q14162 830 aa16.84■□□□□ 0.29
ERCC3-202ENST00000426778 DCAF5Q96JK2 942 aa16.84■□□□□ 0.29
ERCC3-202ENST00000426778 NPHP1O15259 732 aa16.84■□□□□ 0.29
ERCC3-202ENST00000426778 TPM3P06753 285 aa16.84■□□□□ 0.29
ERCC3-202ENST00000426778 GORABQ5T7V8 394 aa16.84■□□□□ 0.29
ERCC3-202ENST00000426778 NKX2-3Q8TAU0 364 aa16.84■□□□□ 0.29
ERCC3-202ENST00000426778 SDF4Q9BRK5 362 aa16.84■□□□□ 0.29
ERCC3-202ENST00000426778 CLIC4Q9Y696 253 aa16.84■□□□□ 0.29
ERCC3-202ENST00000426778 EXOSC10Q01780 885 aaKnown RBP16.83■□□□□ 0.29
ERCC3-202ENST00000426778 PCDHA7Q9UN72 937 aa16.83■□□□□ 0.29
ERCC3-202ENST00000426778 KAT6BQ8WYB5 2073 aa16.83■□□□□ 0.29
ERCC3-202ENST00000426778 ZMYM1Q5SVZ6 1142 aa16.83■□□□□ 0.28
ERCC3-202ENST00000426778 CWC25Q9NXE8 425 aaPredicted RBP16.83■□□□□ 0.28
ERCC3-202ENST00000426778 RCOR1Q9UKL0 485 aa16.83■□□□□ 0.28
ERCC3-202ENST00000426778 PRDM4Q9UKN5 801 aa16.83■□□□□ 0.28
ERCC3-202ENST00000426778 SLIT3O75094 1523 aa16.83■□□□□ 0.28
ERCC3-202ENST00000426778 OVOS2A0A0G2JMS6 1433 aa16.83■□□□□ 0.28
ERCC3-202ENST00000426778 NCBP1Q09161 790 aaKnown RBP16.83■□□□□ 0.28
ERCC3-202ENST00000426778 DHX40Q8IX18 779 aaKnown RBP16.83■□□□□ 0.28
ERCC3-202ENST00000426778 AIFM3Q96NN9 605 aa16.83■□□□□ 0.28
ERCC3-202ENST00000426778 NDUFA8P51970 172 aa16.82■□□□□ 0.28
ERCC3-202ENST00000426778 LRRC8AQ8IWT6 810 aa16.82■□□□□ 0.28
ERCC3-202ENST00000426778 MRC1P22897 1456 aa16.82■□□□□ 0.28
ERCC3-202ENST00000426778 SH3TC1Q8TE82 1336 aa16.82■□□□□ 0.28
ERCC3-202ENST00000426778 CARMIL3Q8ND23 1372 aa16.82■□□□□ 0.28
ERCC3-202ENST00000426778 STX1AQ16623 288 aa16.82■□□□□ 0.28
ERCC3-202ENST00000426778 H7C1W4 665 aa16.81■□□□□ 0.28
ERCC3-202ENST00000426778 RNF113AO15541 343 aaKnown RBP16.81■□□□□ 0.28
ERCC3-202ENST00000426778 SKILP12757 684 aa16.81■□□□□ 0.28
ERCC3-202ENST00000426778 SF3A1Q15459 793 aaKnown RBP16.81■□□□□ 0.28
ERCC3-202ENST00000426778 FAM89AQ96GI7 184 aa16.81■□□□□ 0.28
ERCC3-202ENST00000426778 PALLDQ8WX93 1383 aa16.81■□□□□ 0.28
ERCC3-202ENST00000426778 DPCR1Q3MIW9 517 aa16.81■□□□□ 0.28
ERCC3-202ENST00000426778 PUS7LQ9H0K6 701 aaKnown RBP16.81■□□□□ 0.28
ERCC3-202ENST00000426778 SCN11AQ9UI33 1791 aa16.81■□□□□ 0.28
ERCC3-202ENST00000426778 KLF18A0A0U1RQI7 1052 aa16.8■□□□□ 0.28
ERCC3-202ENST00000426778 CCDC69A6NI79 296 aa16.8■□□□□ 0.28
ERCC3-202ENST00000426778 EYA2O00167 538 aa16.8■□□□□ 0.28
ERCC3-202ENST00000426778 MARCKSP29966 332 aaPredicted RBP16.8■□□□□ 0.28
ERCC3-202ENST00000426778 STK11IPQ8N1F8 1099 aa16.8■□□□□ 0.28
ERCC3-202ENST00000426778 GOLGA8BA8MQT2 603 aa16.8■□□□□ 0.28
ERCC3-202ENST00000426778 FOXP2O15409 715 aa16.8■□□□□ 0.28
ERCC3-202ENST00000426778 FAM160A1Q05DH4 1040 aa16.8■□□□□ 0.28
ERCC3-202ENST00000426778 ENGASEQ8NFI3 743 aa16.8■□□□□ 0.28
ERCC3-202ENST00000426778 HELLSQ9NRZ9 838 aa16.8■□□□□ 0.28
ERCC3-202ENST00000426778 STK38Q15208 465 aa16.8■□□□□ 0.28
ERCC3-202ENST00000426778 NAA16Q6N069 864 aaPredicted RBP16.8■□□□□ 0.28
ERCC3-202ENST00000426778 DSCC1Q9BVC3 393 aa16.8■□□□□ 0.28
ERCC3-202ENST00000426778 C1orf167Q5SNV9 1468 aa16.79■□□□□ 0.28
ERCC3-202ENST00000426778 ARFGEF2Q9Y6D5 1785 aa16.79■□□□□ 0.28
ERCC3-202ENST00000426778 KIF28PB7ZC32 967 aa16.79■□□□□ 0.28
ERCC3-202ENST00000426778 FGAP02671 866 aa16.79■□□□□ 0.28
ERCC3-202ENST00000426778 PDIA4P13667 645 aaKnown RBP16.79■□□□□ 0.28
ERCC3-202ENST00000426778 ZAP70P43403 619 aa16.79■□□□□ 0.28
ERCC3-202ENST00000426778 TTC39AQ5SRH9 613 aa16.79■□□□□ 0.28
ERCC3-202ENST00000426778 UBE2Q2LH0YL09 131 aa16.79■□□□□ 0.28
ERCC3-202ENST00000426778 HMGB1P09429 215 aaKnown RBP16.79■□□□□ 0.28
ERCC3-202ENST00000426778 IL15P40933 162 aaPredicted RBP16.79■□□□□ 0.28
ERCC3-202ENST00000426778 LLPHQ9BRT6 129 aaKnown RBP16.79■□□□□ 0.28
ERCC3-202ENST00000426778 INCENPQ9NQS7 918 aa16.79■□□□□ 0.28
ERCC3-202ENST00000426778 PHRF1Q9P1Y6 1649 aaKnown RBP16.79■□□□□ 0.28
ERCC3-202ENST00000426778 PRC1O43663 620 aa16.78■□□□□ 0.28
ERCC3-202ENST00000426778 SMC2O95347 1197 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms