RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 LRRC24Q50LG9 513 aa16.09■□□□□ 0.17
GPC1-204ENST00000426280 DCAF8Q5TAQ9 597 aa16.09■□□□□ 0.17
GPC1-204ENST00000426280 RSBN1LQ6PCB5 846 aaPredicted RBP16.09■□□□□ 0.17
GPC1-204ENST00000426280 LDHAL6AQ6ZMR3 332 aa16.09■□□□□ 0.17
GPC1-204ENST00000426280 JMYQ8N9B5 988 aa16.09■□□□□ 0.17
GPC1-204ENST00000426280 ANKRD2Q9GZV1 360 aa16.09■□□□□ 0.17
GPC1-204ENST00000426280 H7C1D1 291 aa16.08■□□□□ 0.16
GPC1-204ENST00000426280 CCDC57Q2TAC2 916 aa16.08■□□□□ 0.16
GPC1-204ENST00000426280 DACT2Q5SW24 774 aa16.08■□□□□ 0.16
GPC1-204ENST00000426280 PODNQ7Z5L7 613 aa16.08■□□□□ 0.16
GPC1-204ENST00000426280 RIPOR2Q9Y4F9 1068 aa16.08■□□□□ 0.16
GPC1-204ENST00000426280 ZNF646O15015 1829 aaPredicted RBP16.08■□□□□ 0.16
GPC1-204ENST00000426280 USP17L3A6NCW0 530 aa16.07■□□□□ 0.16
GPC1-204ENST00000426280 USP17L4A6NCW7 530 aa16.07■□□□□ 0.16
GPC1-204ENST00000426280 TMEM88BA6NKF7 163 aa16.07■□□□□ 0.16
GPC1-204ENST00000426280 RFX5P48382 616 aaPredicted RBP16.07■□□□□ 0.16
GPC1-204ENST00000426280 USP17L1Q7RTZ2 530 aa16.07■□□□□ 0.16
GPC1-204ENST00000426280 CD209Q9NNX6 404 aa16.07■□□□□ 0.16
GPC1-204ENST00000426280 SCAF8Q9UPN6 1271 aaKnown RBP16.07■□□□□ 0.16
GPC1-204ENST00000426280 A0A1B0GUL6 1792 aa16.07■□□□□ 0.16
GPC1-204ENST00000426280 RPS12P25398 132 aaKnown RBP16.06■□□□□ 0.16
GPC1-204ENST00000426280 USP48Q86UV5 1035 aa16.06■□□□□ 0.16
GPC1-204ENST00000426280 COA1Q9GZY4 146 aa16.06■□□□□ 0.16
GPC1-204ENST00000426280 CNNM1Q9NRU3 951 aa16.06■□□□□ 0.16
GPC1-204ENST00000426280 ZNF280AP59817 542 aaPredicted RBP16.05■□□□□ 0.16
GPC1-204ENST00000426280 ZBED9Q6R2W3 1325 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 ADM5C9JUS6 153 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 KCNJ4P48050 445 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 VEGFBP49765 207 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 GTF2IP78347 998 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 KIF4BQ2VIQ3 1234 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 TAF7LQ5H9L4 462 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 C15orf52Q6ZUT6 534 aaKnown RBP16.04■□□□□ 0.16
GPC1-204ENST00000426280 CERS5Q8N5B7 392 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 AGBL3Q8NEM8 1001 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 FBXW7Q969H0 707 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 MEIS3Q99687 375 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 API5Q9BZZ5 524 aaKnown RBP16.04■□□□□ 0.16
GPC1-204ENST00000426280 JAG2Q9Y219 1238 aa16.04■□□□□ 0.16
GPC1-204ENST00000426280 PSME4Q14997 1843 aa16.03■□□□□ 0.16
GPC1-204ENST00000426280 CNTNAP1P78357 1384 aa16.03■□□□□ 0.16
GPC1-204ENST00000426280 USP17L8P0C7I0 530 aa16.03■□□□□ 0.16
GPC1-204ENST00000426280 TRIM27P14373 513 aa16.03■□□□□ 0.16
GPC1-204ENST00000426280 GYG1P46976 350 aa16.03■□□□□ 0.16
GPC1-204ENST00000426280 TTLL5Q6EMB2 1281 aa16.03■□□□□ 0.16
GPC1-204ENST00000426280 ZC3H15Q8WU90 426 aaKnown RBP16.03■□□□□ 0.16
GPC1-204ENST00000426280 PCDHAC2Q9Y5I4 1007 aa16.03■□□□□ 0.16
GPC1-204ENST00000426280 LRRFIP2Q9Y608 721 aaKnown RBP16.03■□□□□ 0.16
GPC1-204ENST00000426280 PTPN12Q05209 780 aaKnown RBP16.02■□□□□ 0.16
GPC1-204ENST00000426280 SCARF1Q14162 830 aa16.02■□□□□ 0.16
GPC1-204ENST00000426280 NBPF9Q3BBW0 867 aa16.02■□□□□ 0.16
GPC1-204ENST00000426280 STRIP1Q5VSL9 837 aa16.02■□□□□ 0.16
GPC1-204ENST00000426280 INTS3Q68E01 1043 aaKnown RBP16.02■□□□□ 0.16
GPC1-204ENST00000426280 VGLL2Q8N8G2 317 aa16.02■□□□□ 0.16
GPC1-204ENST00000426280 ARHGAP45Q92619 1136 aa16.02■□□□□ 0.16
GPC1-204ENST00000426280 FRAT1Q92837 279 aaPredicted RBP16.02■□□□□ 0.16
GPC1-204ENST00000426280 CLUAP1Q96AJ1 413 aa16.02■□□□□ 0.16
GPC1-204ENST00000426280 FAM84BQ96KN1 310 aaPredicted RBP16.02■□□□□ 0.16
GPC1-204ENST00000426280 YTHDC1Q96MU7 727 aaKnown RBP16.02■□□□□ 0.16
GPC1-204ENST00000426280 ZNF609O15014 1411 aa16.02■□□□□ 0.15
GPC1-204ENST00000426280 RASSF10A6NK89 507 aa16.01■□□□□ 0.15
GPC1-204ENST00000426280 CELF2O95319 508 aaKnown RBP16.01■□□□□ 0.15
GPC1-204ENST00000426280 IL1R1P14778 569 aa16.01■□□□□ 0.15
GPC1-204ENST00000426280 CDC37L1Q7L3B6 337 aa16.01■□□□□ 0.15
GPC1-204ENST00000426280 ATG9AQ7Z3C6 839 aa16.01■□□□□ 0.15
GPC1-204ENST00000426280 MYOZ2Q9NPC6 264 aa16.01■□□□□ 0.15
GPC1-204ENST00000426280 AOX1Q06278 1338 aa16■□□□□ 0.15
GPC1-204ENST00000426280 DEFB115Q30KQ5 88 aa16■□□□□ 0.15
GPC1-204ENST00000426280 ANGEL2Q5VTE6 544 aaKnown RBP16■□□□□ 0.15
GPC1-204ENST00000426280 KIAA0825Q8IV33 1275 aa16■□□□□ 0.15
GPC1-204ENST00000426280 ZNF408Q9H9D4 720 aa16■□□□□ 0.15
GPC1-204ENST00000426280 GGA3Q9NZ52 723 aa16■□□□□ 0.15
GPC1-204ENST00000426280 PA2G4Q9UQ80 394 aaKnown RBP16■□□□□ 0.15
GPC1-204ENST00000426280 POLR2AP24928 1970 aaKnown RBP16■□□□□ 0.15
GPC1-204ENST00000426280 UBTFL1P0CB47 393 aaPredicted RBP15.99■□□□□ 0.15
GPC1-204ENST00000426280 UBE4AQ14139 1066 aa15.99■□□□□ 0.15
GPC1-204ENST00000426280 GRIK5Q16478 980 aa15.99■□□□□ 0.15
GPC1-204ENST00000426280 PRAMEF18Q5VWM3 479 aa15.99■□□□□ 0.15
GPC1-204ENST00000426280 ATF7IPQ6VMQ6 1270 aa15.99■□□□□ 0.15
GPC1-204ENST00000426280 KRT26Q7Z3Y9 468 aa15.99■□□□□ 0.15
GPC1-204ENST00000426280 TDRD7Q8NHU6 1098 aaKnown RBP15.99■□□□□ 0.15
GPC1-204ENST00000426280 ABT1Q9ULW3 272 aaKnown RBP15.99■□□□□ 0.15
GPC1-204ENST00000426280 TLL2Q9Y6L7 1015 aa15.99■□□□□ 0.15
GPC1-204ENST00000426280 EYA2O00167 538 aa15.98■□□□□ 0.15
GPC1-204ENST00000426280 SASH1O94885 1247 aa15.98■□□□□ 0.15
GPC1-204ENST00000426280 HSPA1AP0DMV8 641 aaKnown RBP15.98■□□□□ 0.15
GPC1-204ENST00000426280 HSPA1BP0DMV9 641 aaKnown RBP15.98■□□□□ 0.15
GPC1-204ENST00000426280 METTL24Q5JXM2 366 aa15.98■□□□□ 0.15
GPC1-204ENST00000426280 CYP4F22Q6NT55 531 aa15.98■□□□□ 0.15
GPC1-204ENST00000426280 FBXO33Q7Z6M2 555 aa15.98■□□□□ 0.15
GPC1-204ENST00000426280 TMEM57Q8N5G2 664 aa15.98■□□□□ 0.15
GPC1-204ENST00000426280 DCPSQ96C86 337 aaKnown RBP15.98■□□□□ 0.15
GPC1-204ENST00000426280 ZBED3Q96IU2 234 aaPredicted RBP15.98■□□□□ 0.15
GPC1-204ENST00000426280 IQSEC3Q9UPP2 1182 aaPredicted RBP15.98■□□□□ 0.15
GPC1-204ENST00000426280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.98■□□□□ 0.15
GPC1-204ENST00000426280 MROH5Q6ZUA9 1318 aa15.97■□□□□ 0.15
GPC1-204ENST00000426280 KIF16BQ96L93 1317 aa15.97■□□□□ 0.15
GPC1-204ENST00000426280 F8W031 263 aaPredicted RBP15.97■□□□□ 0.15
GPC1-204ENST00000426280 WNT10BO00744 389 aa15.97■□□□□ 0.15
GPC1-204ENST00000426280 PDE8BO95263 885 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms