RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 ANKRD24Q8TF21 1146 aa9.95□□□□□ -0.82
HMGB1P32-201ENST00000425971 ZKSCAN3Q9BRR0 538 aa9.95□□□□□ -0.82
HMGB1P32-201ENST00000425971 LIN7BQ9HAP6 207 aa9.95□□□□□ -0.82
HMGB1P32-201ENST00000425971 ABCB6Q9NP58 842 aa9.95□□□□□ -0.82
HMGB1P32-201ENST00000425971 KIF13AQ9H1H9 1805 aa9.94□□□□□ -0.82
HMGB1P32-201ENST00000425971 MROH2BQ7Z745 1585 aa9.94□□□□□ -0.82
HMGB1P32-201ENST00000425971 FOXR1Q6PIV2 292 aa9.94□□□□□ -0.82
HMGB1P32-201ENST00000425971 NCAPG2Q86XI2 1143 aa9.94□□□□□ -0.82
HMGB1P32-201ENST00000425971 CCNJLQ8IV13 435 aa9.94□□□□□ -0.82
HMGB1P32-201ENST00000425971 ZNF775Q96BV0 537 aaPredicted RBP9.94□□□□□ -0.82
HMGB1P32-201ENST00000425971 NSUN5Q96P11 429 aaKnown RBP9.94□□□□□ -0.82
HMGB1P32-201ENST00000425971 SV2AQ7L0J3 742 aa9.93□□□□□ -0.82
HMGB1P32-201ENST00000425971 OSMRQ99650 979 aa9.93□□□□□ -0.82
HMGB1P32-201ENST00000425971 TINF2Q9BSI4 451 aa9.93□□□□□ -0.82
HMGB1P32-201ENST00000425971 DZANK1Q9NVP4 752 aa9.93□□□□□ -0.82
HMGB1P32-201ENST00000425971 AQRO60306 1485 aaKnown RBP eCLIP9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 CFTRP13569 1480 aa9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 GAPVD1Q14C86 1478 aa9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 TMEM238LA0A1B0GVL6 79 aa9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 ZBTB42B2RXF5 422 aa9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 NFKBIEO00221 500 aa9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 C2CD2LO14523 706 aa9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 XRCC5P13010 732 aaKnown RBP9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 ZNF468Q5VIY5 522 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 HS2ST1Q7LGA3 356 aa9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 ERMP1Q7Z2K6 904 aa9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 SREK1Q8WXA9 508 aaKnown RBP9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 OXCT2Q9BYC2 517 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 BHLHE41Q9C0J9 482 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 CCSER2Q9H7U1 834 aa9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 USP35Q9P2H5 1018 aa9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.92□□□□□ -0.82
HMGB1P32-201ENST00000425971 SIN3BO75182 1162 aa9.91□□□□□ -0.82
HMGB1P32-201ENST00000425971 FCGRTP55899 365 aa9.91□□□□□ -0.82
HMGB1P32-201ENST00000425971 AVENQ9NQS1 362 aaPredicted RBP9.91□□□□□ -0.82
HMGB1P32-201ENST00000425971 PPP4R2Q9NY27 417 aa9.91□□□□□ -0.82
HMGB1P32-201ENST00000425971 DDX41Q9UJV9 622 aaKnown RBP9.91□□□□□ -0.82
HMGB1P32-201ENST00000425971 PPM1HQ9ULR3 514 aa9.91□□□□□ -0.82
HMGB1P32-201ENST00000425971 LOC102724428A0A0B4J2F2 783 aa9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 SIK1P57059 783 aa9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 ZNF394Q53GI3 561 aa9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 SYT9Q86SS6 491 aa9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 TMEM102Q8N9M5 508 aaPredicted RBP9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 HHIPQ96QV1 700 aa9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 NOC4LQ9BVI4 516 aaKnown RBP9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 SRA1Q9HD15 236 aaKnown RBP9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 DNAJB12Q9NXW2 375 aaKnown RBP9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 GGT7Q9UJ14 662 aa9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 PRR12Q9ULL5 1215 aa9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 TTF2Q9UNY4 1162 aaKnown RBP9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 PCDHGB7Q9Y5F8 929 aa9.9□□□□□ -0.82
HMGB1P32-201ENST00000425971 TRPA1O75762 1119 aa9.89□□□□□ -0.83
HMGB1P32-201ENST00000425971 ITPKAP23677 461 aa9.89□□□□□ -0.83
HMGB1P32-201ENST00000425971 RACK1P63244 317 aaKnown RBP9.89□□□□□ -0.83
HMGB1P32-201ENST00000425971 MAP3K10Q02779 954 aa9.89□□□□□ -0.83
HMGB1P32-201ENST00000425971 USP48Q86UV5 1035 aa9.89□□□□□ -0.83
HMGB1P32-201ENST00000425971 ACBD3Q9H3P7 528 aa9.89□□□□□ -0.83
HMGB1P32-201ENST00000425971 BMP4P12644 408 aa9.88□□□□□ -0.83
HMGB1P32-201ENST00000425971 GRIA4P48058 902 aa9.88□□□□□ -0.83
HMGB1P32-201ENST00000425971 MLLT1Q03111 559 aaPredicted RBP9.88□□□□□ -0.83
HMGB1P32-201ENST00000425971 GAS6Q14393 721 aa9.88□□□□□ -0.83
HMGB1P32-201ENST00000425971 ZNF654Q8IZM8 581 aa9.88□□□□□ -0.83
HMGB1P32-201ENST00000425971 TNFRSF25Q93038 417 aa9.88□□□□□ -0.83
HMGB1P32-201ENST00000425971 NXPE3Q969Y0 559 aa9.88□□□□□ -0.83
HMGB1P32-201ENST00000425971 SPACA7Q96KW9 195 aa9.88□□□□□ -0.83
HMGB1P32-201ENST00000425971 J3QW42 95 aa9.87□□□□□ -0.83
HMGB1P32-201ENST00000425971 PCSK7Q16549 785 aa9.87□□□□□ -0.83
HMGB1P32-201ENST00000425971 DTHD1Q6ZMT9 781 aa9.87□□□□□ -0.83
HMGB1P32-201ENST00000425971 SLC43A3Q8NBI5 491 aa9.87□□□□□ -0.83
HMGB1P32-201ENST00000425971 DRC1Q96MC2 740 aa9.87□□□□□ -0.83
HMGB1P32-201ENST00000425971 MDFIQ99750 246 aa9.87□□□□□ -0.83
HMGB1P32-201ENST00000425971 PBX4Q9BYU1 374 aa9.87□□□□□ -0.83
HMGB1P32-201ENST00000425971 UBE2OQ9C0C9 1292 aaKnown RBP9.87□□□□□ -0.83
HMGB1P32-201ENST00000425971 RASSF4Q9H2L5 321 aa9.87□□□□□ -0.83
HMGB1P32-201ENST00000425971 KLF15Q9UIH9 416 aa9.87□□□□□ -0.83
HMGB1P32-201ENST00000425971 METTL12A8MUP2 240 aa9.86□□□□□ -0.83
HMGB1P32-201ENST00000425971 ATP11AP98196 1134 aa9.86□□□□□ -0.83
HMGB1P32-201ENST00000425971 SF3A1Q15459 793 aaKnown RBP9.86□□□□□ -0.83
HMGB1P32-201ENST00000425971 HFE2Q6ZVN8 426 aa9.86□□□□□ -0.83
HMGB1P32-201ENST00000425971 COPRSQ9NQ92 184 aa9.86□□□□□ -0.83
HMGB1P32-201ENST00000425971 ARAFP10398 606 aa9.85□□□□□ -0.83
HMGB1P32-201ENST00000425971 MX2P20592 715 aa9.85□□□□□ -0.83
HMGB1P32-201ENST00000425971 TNNI2P48788 182 aa9.85□□□□□ -0.83
HMGB1P32-201ENST00000425971 PCBP4P57723 403 aaKnown RBP9.85□□□□□ -0.83
HMGB1P32-201ENST00000425971 SPRED3Q2MJR0 410 aa9.85□□□□□ -0.83
HMGB1P32-201ENST00000425971 RSRP1Q9BUV0 290 aa9.85□□□□□ -0.83
HMGB1P32-201ENST00000425971 ZFYVE1Q9HBF4 777 aa9.85□□□□□ -0.83
HMGB1P32-201ENST00000425971 AKAP2Q9Y2D5 859 aa9.85□□□□□ -0.83
HMGB1P32-201ENST00000425971 SYNJ2O15056 1496 aa9.85□□□□□ -0.83
HMGB1P32-201ENST00000425971 ADGRL1O94910 1474 aa9.85□□□□□ -0.83
HMGB1P32-201ENST00000425971 SYNJ1O43426 1573 aa9.84□□□□□ -0.83
HMGB1P32-201ENST00000425971 TOPBP1Q92547 1522 aa9.84□□□□□ -0.83
HMGB1P32-201ENST00000425971 A0A096LPE4 126 aa9.84□□□□□ -0.83
HMGB1P32-201ENST00000425971 A0A1W2PPZ6 126 aa9.84□□□□□ -0.83
HMGB1P32-201ENST00000425971 PDE2AO00408 941 aaPredicted RBP9.84□□□□□ -0.83
HMGB1P32-201ENST00000425971 CCDC85BQ15834 202 aaPredicted RBP9.84□□□□□ -0.83
HMGB1P32-201ENST00000425971 SV2BQ7L1I2 683 aa9.84□□□□□ -0.83
HMGB1P32-201ENST00000425971 ZNF576Q9H609 170 aa9.84□□□□□ -0.83
HMGB1P32-201ENST00000425971 CAPN10Q9HC96 672 aa9.84□□□□□ -0.83
HMGB1P32-201ENST00000425971 KBTBD4Q9NVX7 518 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms