RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 YDJCA8MPS7 323 aa30.29■■■□□ 2.44
VEGFA-209ENST00000425836 G3V3G9 751 aa30.29■■■□□ 2.44
VEGFA-209ENST00000425836 DCAF8Q5TAQ9 597 aa30.29■■■□□ 2.44
VEGFA-209ENST00000425836 ZNF541Q9H0D2 1346 aa30.29■■■□□ 2.44
VEGFA-209ENST00000425836 LPIN2Q92539 896 aa30.28■■■□□ 2.44
VEGFA-209ENST00000425836 CCDC88AQ3V6T2 1871 aa30.28■■■□□ 2.44
VEGFA-209ENST00000425836 A0A1B0GUL6 1792 aa30.28■■■□□ 2.44
VEGFA-209ENST00000425836 EIF6P56537 245 aaKnown RBP30.28■■■□□ 2.44
VEGFA-209ENST00000425836 ATP2B3Q16720 1220 aa30.28■■■□□ 2.44
VEGFA-209ENST00000425836 COA1Q9GZY4 146 aa30.28■■■□□ 2.44
VEGFA-209ENST00000425836 IFIT1P09914 478 aaKnown RBP30.27■■■□□ 2.44
VEGFA-209ENST00000425836 SLC5A1P13866 664 aa30.26■■■□□ 2.43
VEGFA-209ENST00000425836 CXCL9Q07325 125 aa30.26■■■□□ 2.43
VEGFA-209ENST00000425836 HSP90AB4PQ58FF6 505 aa30.26■■■□□ 2.43
VEGFA-209ENST00000425836 PODNQ7Z5L7 613 aa30.26■■■□□ 2.43
VEGFA-209ENST00000425836 FAM84BQ96KN1 310 aaPredicted RBP30.26■■■□□ 2.43
VEGFA-209ENST00000425836 KCNQ5Q9NR82 932 aa30.26■■■□□ 2.43
VEGFA-209ENST00000425836 AKAP2Q9Y2D5 859 aa30.26■■■□□ 2.43
VEGFA-209ENST00000425836 DICER1Q9UPY3 1922 aaKnown RBP30.26■■■□□ 2.43
VEGFA-209ENST00000425836 GLTPD2A6NH11 291 aa30.25■■■□□ 2.43
VEGFA-209ENST00000425836 GYG1P46976 350 aa30.25■■■□□ 2.43
VEGFA-209ENST00000425836 DPY19L2Q6NUT2 758 aa30.25■■■□□ 2.43
VEGFA-209ENST00000425836 TIMM10P62072 90 aa30.24■■■□□ 2.43
VEGFA-209ENST00000425836 ZNF804AQ7Z570 1209 aa30.24■■■□□ 2.43
VEGFA-209ENST00000425836 CD209Q9NNX6 404 aa30.24■■■□□ 2.43
VEGFA-209ENST00000425836 RAD17O75943 681 aa30.24■■■□□ 2.43
VEGFA-209ENST00000425836 FBXO33Q7Z6M2 555 aa30.24■■■□□ 2.43
VEGFA-209ENST00000425836 ERC1Q8IUD2 1116 aa30.24■■■□□ 2.43
VEGFA-209ENST00000425836 TIAM2Q8IVF5 1701 aa30.23■■■□□ 2.43
VEGFA-209ENST00000425836 DDNO94850 711 aaPredicted RBP30.23■■■□□ 2.43
VEGFA-209ENST00000425836 HIBADHP31937 336 aaKnown RBP30.23■■■□□ 2.43
VEGFA-209ENST00000425836 A0A1B0GUL7 405 aa30.22■■■□□ 2.43
VEGFA-209ENST00000425836 CIAPIN1Q6FI81 312 aa30.22■■■□□ 2.43
VEGFA-209ENST00000425836 DCTPP1Q9H773 170 aa30.22■■■□□ 2.43
VEGFA-209ENST00000425836 GPR108Q9NPR9 543 aa30.22■■■□□ 2.43
VEGFA-209ENST00000425836 RAB11FIP3O75154 756 aa30.21■■■□□ 2.43
VEGFA-209ENST00000425836 CAVIN4Q5BKX8 364 aa30.21■■■□□ 2.43
VEGFA-209ENST00000425836 APBB1O00213 710 aa30.2■■■□□ 2.43
VEGFA-209ENST00000425836 IL1R1P14778 569 aa30.2■■■□□ 2.43
VEGFA-209ENST00000425836 BCAMP50895 628 aa30.2■■■□□ 2.43
VEGFA-209ENST00000425836 GPC2Q8N158 579 aa30.2■■■□□ 2.43
VEGFA-209ENST00000425836 RHPN1Q8TCX5 695 aa30.2■■■□□ 2.43
VEGFA-209ENST00000425836 ZNF526Q8TF50 670 aaPredicted RBP30.2■■■□□ 2.43
VEGFA-209ENST00000425836 GJA3Q9Y6H8 435 aa30.2■■■□□ 2.43
VEGFA-209ENST00000425836 ADORA1P30542 326 aa30.2■■■□□ 2.42
VEGFA-209ENST00000425836 TNNI3KQ59H18 835 aa30.2■■■□□ 2.42
VEGFA-209ENST00000425836 FPGT-TNNI3KV9GXZ4 949 aa30.2■■■□□ 2.42
VEGFA-209ENST00000425836 PSMD14O00487 310 aa30.19■■■□□ 2.42
VEGFA-209ENST00000425836 HDAC1Q13547 482 aaPredicted RBP30.19■■■□□ 2.42
VEGFA-209ENST00000425836 TNIP1Q15025 636 aa30.19■■■□□ 2.42
VEGFA-209ENST00000425836 VPS37DQ86XT2 251 aa30.19■■■□□ 2.42
VEGFA-209ENST00000425836 KIF1BPQ96EK5 621 aa30.19■■■□□ 2.42
VEGFA-209ENST00000425836 NEUROD6Q96NK8 337 aa30.19■■■□□ 2.42
VEGFA-209ENST00000425836 TDRD7Q8NHU6 1098 aaKnown RBP30.18■■■□□ 2.42
VEGFA-209ENST00000425836 XAGE2Q96GT9 111 aa30.18■■■□□ 2.42
VEGFA-209ENST00000425836 KDM2BQ8NHM5 1336 aa30.18■■■□□ 2.42
VEGFA-209ENST00000425836 ZNF609O15014 1411 aa30.17■■■□□ 2.42
VEGFA-209ENST00000425836 USP17L3A6NCW0 530 aa30.16■■■□□ 2.42
VEGFA-209ENST00000425836 USP17L4A6NCW7 530 aa30.16■■■□□ 2.42
VEGFA-209ENST00000425836 USP17L1Q7RTZ2 530 aa30.16■■■□□ 2.42
VEGFA-209ENST00000425836 ZNF784Q8NCA9 323 aaPredicted RBP30.16■■■□□ 2.42
VEGFA-209ENST00000425836 IL1RAPL2Q9NP60 686 aa30.16■■■□□ 2.42
VEGFA-209ENST00000425836 VIL1P09327 827 aaKnown RBP30.15■■■□□ 2.42
VEGFA-209ENST00000425836 EAF2Q96CJ1 260 aaPredicted RBP30.15■■■□□ 2.42
VEGFA-209ENST00000425836 L3MBTL3Q96JM7 780 aaPredicted RBP30.15■■■□□ 2.42
VEGFA-209ENST00000425836 GTF2IP78347 998 aa30.14■■■□□ 2.42
VEGFA-209ENST00000425836 STRIP1Q5VSL9 837 aa30.14■■■□□ 2.42
VEGFA-209ENST00000425836 CCDC102BQ68D86 513 aa30.14■■■□□ 2.42
VEGFA-209ENST00000425836 TTLL5Q6EMB2 1281 aa30.14■■■□□ 2.42
VEGFA-209ENST00000425836 IQSEC3Q9UPP2 1182 aaPredicted RBP30.14■■■□□ 2.42
VEGFA-209ENST00000425836 PHKA1P46020 1223 aa30.13■■■□□ 2.41
VEGFA-209ENST00000425836 FBXW7Q969H0 707 aa30.13■■■□□ 2.41
VEGFA-209ENST00000425836 RWDD1Q9H446 243 aaPredicted RBP30.13■■■□□ 2.41
VEGFA-209ENST00000425836 ZBTB12Q9Y330 459 aaPredicted RBP30.13■■■□□ 2.41
VEGFA-209ENST00000425836 DACT2Q5SW24 774 aa30.12■■■□□ 2.41
VEGFA-209ENST00000425836 DBNDD2Q9BQY9 259 aa30.12■■■□□ 2.41
VEGFA-209ENST00000425836 LRRCC1Q9C099 1032 aa30.12■■■□□ 2.41
VEGFA-209ENST00000425836 CCDC8Q9H0W5 538 aaPredicted RBP30.12■■■□□ 2.41
VEGFA-209ENST00000425836 GPBP1L1Q9HC44 474 aaPredicted RBP30.12■■■□□ 2.41
VEGFA-209ENST00000425836 POTECB2RU33 542 aa30.11■■■□□ 2.41
VEGFA-209ENST00000425836 IGHDP01880 384 aa30.11■■■□□ 2.41
VEGFA-209ENST00000425836 GMPSP49915 693 aaPredicted RBP30.11■■■□□ 2.41
VEGFA-209ENST00000425836 RSBN1LQ6PCB5 846 aaPredicted RBP30.11■■■□□ 2.41
VEGFA-209ENST00000425836 AACSQ86V21 672 aa30.11■■■□□ 2.41
VEGFA-209ENST00000425836 CLASRPQ8N2M8 674 aaKnown RBP30.11■■■□□ 2.41
VEGFA-209ENST00000425836 RRAGCQ9HB90 399 aa30.11■■■□□ 2.41
VEGFA-209ENST00000425836 NMRK2Q9NPI5 230 aa30.11■■■□□ 2.41
VEGFA-209ENST00000425836 SCNN1DP51172 638 aa30.11■■■□□ 2.41
VEGFA-209ENST00000425836 GORABQ5T7V8 394 aa30.11■■■□□ 2.41
VEGFA-209ENST00000425836 MXD3Q9BW11 206 aa30.11■■■□□ 2.41
VEGFA-209ENST00000425836 GNL3LQ9NVN8 582 aaKnown RBP30.11■■■□□ 2.41
VEGFA-209ENST00000425836 TLR7Q9NYK1 1049 aaKnown RBP30.11■■■□□ 2.41
VEGFA-209ENST00000425836 DBNLQ9UJU6 430 aaKnown RBP30.11■■■□□ 2.41
VEGFA-209ENST00000425836 JAG2Q9Y219 1238 aa30.11■■■□□ 2.41
VEGFA-209ENST00000425836 SCN9AQ15858 1988 aa30.1■■■□□ 2.41
VEGFA-209ENST00000425836 FAM205AQ6ZU69 1335 aa30.1■■■□□ 2.41
VEGFA-209ENST00000425836 FRAT2O75474 233 aaPredicted RBP30.1■■■□□ 2.41
VEGFA-209ENST00000425836 SMARCA5O60264 1052 aaPredicted RBP30.09■■■□□ 2.41
VEGFA-209ENST00000425836 RPS12P25398 132 aaKnown RBP30.08■■■□□ 2.41
VEGFA-209ENST00000425836 GMLQ99445 158 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms