RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 CAVIN4Q5BKX8 364 aa29.66■■■□□ 2.34
APOE-202ENST00000425718 LARGE2Q8N3Y3 721 aa29.66■■■□□ 2.34
APOE-202ENST00000425718 ZNF277Q9NRM2 450 aaPredicted RBP29.66■■■□□ 2.34
APOE-202ENST00000425718 RASSF7Q02833 373 aa29.65■■■□□ 2.34
APOE-202ENST00000425718 ZNF804AQ7Z570 1209 aa29.65■■■□□ 2.34
APOE-202ENST00000425718 ZC3H4Q9UPT8 1303 aaKnown RBP29.65■■■□□ 2.34
APOE-202ENST00000425718 ZNF609O15014 1411 aa29.64■■■□□ 2.34
APOE-202ENST00000425718 MYH13Q9UKX3 1938 aa29.64■■■□□ 2.34
APOE-202ENST00000425718 A0A1B0GUL7 405 aa29.63■■■□□ 2.33
APOE-202ENST00000425718 TNNI3KQ59H18 835 aa29.63■■■□□ 2.33
APOE-202ENST00000425718 VPS37DQ86XT2 251 aa29.63■■■□□ 2.33
APOE-202ENST00000425718 SMC5Q8IY18 1101 aa29.63■■■□□ 2.33
APOE-202ENST00000425718 NIM1KQ8IY84 436 aa29.63■■■□□ 2.33
APOE-202ENST00000425718 COA1Q9GZY4 146 aa29.63■■■□□ 2.33
APOE-202ENST00000425718 FPGT-TNNI3KV9GXZ4 949 aa29.63■■■□□ 2.33
APOE-202ENST00000425718 AOC3Q16853 763 aa29.62■■■□□ 2.33
APOE-202ENST00000425718 SLC51AQ86UW1 340 aa29.62■■■□□ 2.33
APOE-202ENST00000425718 CCDC136Q96JN2 1154 aa29.61■■■□□ 2.33
APOE-202ENST00000425718 GNL3LQ9NVN8 582 aaKnown RBP29.61■■■□□ 2.33
APOE-202ENST00000425718 PPP4R2Q9NY27 417 aa29.61■■■□□ 2.33
APOE-202ENST00000425718 TIAM2Q8IVF5 1701 aa29.6■■■□□ 2.33
APOE-202ENST00000425718 APBB1O00213 710 aa29.6■■■□□ 2.33
APOE-202ENST00000425718 RIMBP2O15034 1052 aa29.6■■■□□ 2.33
APOE-202ENST00000425718 HIBADHP31937 336 aaKnown RBP29.6■■■□□ 2.33
APOE-202ENST00000425718 GORABQ5T7V8 394 aa29.6■■■□□ 2.33
APOE-202ENST00000425718 PODNQ7Z5L7 613 aa29.6■■■□□ 2.33
APOE-202ENST00000425718 NEUROD6Q96NK8 337 aa29.6■■■□□ 2.33
APOE-202ENST00000425718 RNF181Q9P0P0 153 aa29.6■■■□□ 2.33
APOE-202ENST00000425718 PSME4Q14997 1843 aa29.59■■■□□ 2.33
APOE-202ENST00000425718 IGHDP01880 384 aa29.59■■■□□ 2.33
APOE-202ENST00000425718 ZBTB22O15209 634 aa29.58■■■□□ 2.33
APOE-202ENST00000425718 IFIT2P09913 472 aaKnown RBP29.58■■■□□ 2.33
APOE-202ENST00000425718 IRS2Q9Y4H2 1338 aa29.58■■■□□ 2.33
APOE-202ENST00000425718 TIMM10P62072 90 aa29.57■■■□□ 2.32
APOE-202ENST00000425718 C9orf131Q5VYM1 1079 aa29.57■■■□□ 2.32
APOE-202ENST00000425718 CENPQQ7L2Z9 268 aaPredicted RBP29.57■■■□□ 2.32
APOE-202ENST00000425718 AACSQ86V21 672 aa29.57■■■□□ 2.32
APOE-202ENST00000425718 XAGE2Q96GT9 111 aa29.57■■■□□ 2.32
APOE-202ENST00000425718 IL1RAPL2Q9NP60 686 aa29.57■■■□□ 2.32
APOE-202ENST00000425718 ZNRF3Q9ULT6 936 aa29.57■■■□□ 2.32
APOE-202ENST00000425718 SNAP23O00161 211 aa29.56■■■□□ 2.32
APOE-202ENST00000425718 CCDC158Q5M9N0 1113 aa29.56■■■□□ 2.32
APOE-202ENST00000425718 ANKRD45Q5TZF3 282 aa29.56■■■□□ 2.32
APOE-202ENST00000425718 FBXO33Q7Z6M2 555 aa29.56■■■□□ 2.32
APOE-202ENST00000425718 FAM84BQ96KN1 310 aaPredicted RBP29.56■■■□□ 2.32
APOE-202ENST00000425718 ECE2O60344 883 aa29.55■■■□□ 2.32
APOE-202ENST00000425718 EIF6P56537 245 aaKnown RBP29.55■■■□□ 2.32
APOE-202ENST00000425718 GPATCH3Q96I76 525 aa29.55■■■□□ 2.32
APOE-202ENST00000425718 GPR101Q96P66 508 aaPredicted RBP29.55■■■□□ 2.32
APOE-202ENST00000425718 SEMA3EO15041 775 aa29.54■■■□□ 2.32
APOE-202ENST00000425718 IL1R1P14778 569 aa29.54■■■□□ 2.32
APOE-202ENST00000425718 EAF2Q96CJ1 260 aaPredicted RBP29.54■■■□□ 2.32
APOE-202ENST00000425718 CD209Q9NNX6 404 aa29.54■■■□□ 2.32
APOE-202ENST00000425718 UQCRFS1P1P0C7P4 283 aa29.53■■■□□ 2.32
APOE-202ENST00000425718 TXNRD3Q86VQ6 643 aa29.53■■■□□ 2.32
APOE-202ENST00000425718 DBNDD1Q9H9R9 158 aa29.53■■■□□ 2.32
APOE-202ENST00000425718 WTIPA6NIX2 430 aaPredicted RBP29.52■■■□□ 2.32
APOE-202ENST00000425718 FZD9O00144 591 aa29.52■■■□□ 2.32
APOE-202ENST00000425718 FRAT2O75474 233 aaPredicted RBP29.52■■■□□ 2.32
APOE-202ENST00000425718 KLRK1P26718 216 aa29.52■■■□□ 2.32
APOE-202ENST00000425718 GYG1P46976 350 aa29.52■■■□□ 2.32
APOE-202ENST00000425718 TNIP1Q15025 636 aa29.51■■■□□ 2.31
APOE-202ENST00000425718 DOK7Q18PE1 504 aa29.51■■■□□ 2.31
APOE-202ENST00000425718 CCDC102BQ68D86 513 aa29.51■■■□□ 2.31
APOE-202ENST00000425718 UTRNP46939 3433 aa29.51■■■□□ 2.31
APOE-202ENST00000425718 BCAMP50895 628 aa29.5■■■□□ 2.31
APOE-202ENST00000425718 PRELPP51888 382 aa29.5■■■□□ 2.31
APOE-202ENST00000425718 NUCB1Q02818 461 aa29.5■■■□□ 2.31
APOE-202ENST00000425718 TTC39AQ5SRH9 613 aa29.5■■■□□ 2.31
APOE-202ENST00000425718 TDRD7Q8NHU6 1098 aaKnown RBP29.5■■■□□ 2.31
APOE-202ENST00000425718 ZNF512BQ96KM6 892 aaPredicted RBP29.5■■■□□ 2.31
APOE-202ENST00000425718 CCDC8Q9H0W5 538 aaPredicted RBP29.5■■■□□ 2.31
APOE-202ENST00000425718 DENND2AQ9ULE3 1009 aa29.5■■■□□ 2.31
APOE-202ENST00000425718 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.5■■■□□ 2.31
APOE-202ENST00000425718 SCN9AQ15858 1988 aa29.5■■■□□ 2.31
APOE-202ENST00000425718 ADORA1P30542 326 aa29.49■■■□□ 2.31
APOE-202ENST00000425718 DPY19L2Q6NUT2 758 aa29.49■■■□□ 2.31
APOE-202ENST00000425718 CHD1LQ86WJ1 897 aa29.49■■■□□ 2.31
APOE-202ENST00000425718 DBNDD2Q9BQY9 259 aa29.49■■■□□ 2.31
APOE-202ENST00000425718 DBNLQ9UJU6 430 aaKnown RBP29.49■■■□□ 2.31
APOE-202ENST00000425718 PDS5AQ29RF7 1337 aaKnown RBP29.48■■■□□ 2.31
APOE-202ENST00000425718 SMARCA5O60264 1052 aaPredicted RBP29.48■■■□□ 2.31
APOE-202ENST00000425718 KDM2BQ8NHM5 1336 aa29.47■■■□□ 2.31
APOE-202ENST00000425718 COL4A5P29400 1685 aa29.47■■■□□ 2.31
APOE-202ENST00000425718 USP17L3A6NCW0 530 aa29.47■■■□□ 2.31
APOE-202ENST00000425718 USP17L4A6NCW7 530 aa29.47■■■□□ 2.31
APOE-202ENST00000425718 ARID4AP29374 1257 aaPredicted RBP29.47■■■□□ 2.31
APOE-202ENST00000425718 STRIP1Q5VSL9 837 aa29.47■■■□□ 2.31
APOE-202ENST00000425718 CIAPIN1Q6FI81 312 aa29.47■■■□□ 2.31
APOE-202ENST00000425718 B4GALNT3Q6L9W6 998 aa29.47■■■□□ 2.31
APOE-202ENST00000425718 USP17L1Q7RTZ2 530 aa29.47■■■□□ 2.31
APOE-202ENST00000425718 TBC1D22AQ8WUA7 517 aa29.47■■■□□ 2.31
APOE-202ENST00000425718 MYO3BQ8WXR4 1341 aa29.46■■■□□ 2.31
APOE-202ENST00000425718 PHKA1P46020 1223 aa29.46■■■□□ 2.31
APOE-202ENST00000425718 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.46■■■□□ 2.31
APOE-202ENST00000425718 FKBP1AP62942 108 aaKnown RBP29.45■■■□□ 2.31
APOE-202ENST00000425718 TTLL5Q6EMB2 1281 aa29.45■■■□□ 2.31
APOE-202ENST00000425718 TTC41PQ6P2S7 1318 aa29.45■■■□□ 2.3
APOE-202ENST00000425718 FAM205AQ6ZU69 1335 aa29.45■■■□□ 2.3
APOE-202ENST00000425718 AKAP11Q9UKA4 1901 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms