RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 VGLL2Q8N8G2 317 aa19.74■□□□□ 0.75
CMTM3-202ENST00000424011 LY75O60449 1722 aa19.73■□□□□ 0.75
CMTM3-202ENST00000424011 FKBP4Q02790 459 aaKnown RBP eCLIP19.73■□□□□ 0.75
CMTM3-202ENST00000424011 ZSCAN31Q96LW9 406 aaPredicted RBP19.73■□□□□ 0.75
CMTM3-202ENST00000424011 RNF113AO15541 343 aaKnown RBP19.73■□□□□ 0.75
CMTM3-202ENST00000424011 CPA1P15085 419 aa19.73■□□□□ 0.75
CMTM3-202ENST00000424011 ADCK5Q3MIX3 580 aa19.73■□□□□ 0.75
CMTM3-202ENST00000424011 ZMYM1Q5SVZ6 1142 aa19.73■□□□□ 0.75
CMTM3-202ENST00000424011 FOXD4L5Q5VV16 416 aaPredicted RBP19.73■□□□□ 0.75
CMTM3-202ENST00000424011 FOXD4L4Q8WXT5 416 aaPredicted RBP19.73■□□□□ 0.75
CMTM3-202ENST00000424011 CHAMP1Q96JM3 812 aa19.73■□□□□ 0.75
CMTM3-202ENST00000424011 MPHOSPH8Q99549 860 aa19.73■□□□□ 0.75
CMTM3-202ENST00000424011 LMBRD1Q9NUN5 540 aa19.73■□□□□ 0.75
CMTM3-202ENST00000424011 RPAP1Q9BWH6 1393 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-202ENST00000424011 FAM177BA6PVY3 158 aa19.72■□□□□ 0.75
CMTM3-202ENST00000424011 PUM3Q15397 648 aaKnown RBP19.72■□□□□ 0.75
CMTM3-202ENST00000424011 DDX49Q9Y6V7 483 aaKnown RBP19.72■□□□□ 0.75
CMTM3-202ENST00000424011 LRP5O75197 1615 aa19.72■□□□□ 0.75
CMTM3-202ENST00000424011 BRD1O95696 1058 aa19.71■□□□□ 0.75
CMTM3-202ENST00000424011 ANKRD1Q15327 319 aa19.71■□□□□ 0.75
CMTM3-202ENST00000424011 KLHL40Q2TBA0 621 aa19.71■□□□□ 0.75
CMTM3-202ENST00000424011 LARP6Q9BRS8 491 aaKnown RBP19.71■□□□□ 0.75
CMTM3-202ENST00000424011 SH2B1Q9NRF2 756 aaPredicted RBP19.71■□□□□ 0.75
CMTM3-202ENST00000424011 LRRC4BQ9NT99 713 aa19.71■□□□□ 0.75
CMTM3-202ENST00000424011 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.71■□□□□ 0.75
CMTM3-202ENST00000424011 BLOC1S2Q6QNY1 142 aa19.71■□□□□ 0.75
CMTM3-202ENST00000424011 LPIN2Q92539 896 aa19.71■□□□□ 0.75
CMTM3-202ENST00000424011 DSCC1Q9BVC3 393 aa19.71■□□□□ 0.75
CMTM3-202ENST00000424011 ISY1Q9ULR0 285 aaKnown RBP19.71■□□□□ 0.75
CMTM3-202ENST00000424011 GNPATO15228 680 aa19.7■□□□□ 0.74
CMTM3-202ENST00000424011 IGHMBP2P38935 993 aaKnown RBP19.7■□□□□ 0.74
CMTM3-202ENST00000424011 TTF1Q15361 905 aaPredicted RBP19.7■□□□□ 0.74
CMTM3-202ENST00000424011 SEC62Q99442 399 aaKnown RBP19.7■□□□□ 0.74
CMTM3-202ENST00000424011 ALDH8A1Q9H2A2 487 aaPredicted RBP19.7■□□□□ 0.74
CMTM3-202ENST00000424011 GRPEL1Q9HAV7 217 aa19.7■□□□□ 0.74
CMTM3-202ENST00000424011 RTCBQ9Y3I0 505 aaKnown RBP19.7■□□□□ 0.74
CMTM3-202ENST00000424011 BCORQ6W2J9 1755 aa19.7■□□□□ 0.74
CMTM3-202ENST00000424011 A0A0U1RQG5 324 aaPredicted RBP19.69■□□□□ 0.74
CMTM3-202ENST00000424011 UQCRFS1P1P0C7P4 283 aa19.69■□□□□ 0.74
CMTM3-202ENST00000424011 POTEAQ6S8J7 498 aa19.69■□□□□ 0.74
CMTM3-202ENST00000424011 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.69■□□□□ 0.74
CMTM3-202ENST00000424011 SLC27A3Q5K4L6 730 aa19.69■□□□□ 0.74
CMTM3-202ENST00000424011 GAS2L3Q86XJ1 694 aa19.69■□□□□ 0.74
CMTM3-202ENST00000424011 SLC5A1P13866 664 aa19.68■□□□□ 0.74
CMTM3-202ENST00000424011 ZSCAN25Q6NSZ9 544 aa19.68■□□□□ 0.74
CMTM3-202ENST00000424011 CCDC129Q6ZRS4 1044 aa19.68■□□□□ 0.74
CMTM3-202ENST00000424011 SMIM5Q71RC9 77 aa19.68■□□□□ 0.74
CMTM3-202ENST00000424011 NARFQ9UHQ1 456 aa19.68■□□□□ 0.74
CMTM3-202ENST00000424011 PRPF40AO75400 957 aaKnown RBP19.68■□□□□ 0.74
CMTM3-202ENST00000424011 ZAP70P43403 619 aa19.68■□□□□ 0.74
CMTM3-202ENST00000424011 CDC5LQ99459 802 aaKnown RBP19.68■□□□□ 0.74
CMTM3-202ENST00000424011 FGFR2P21802 821 aa19.67■□□□□ 0.74
CMTM3-202ENST00000424011 RPS6KB1P23443 525 aa19.67■□□□□ 0.74
CMTM3-202ENST00000424011 NYXQ9GZU5 481 aa19.67■□□□□ 0.74
CMTM3-202ENST00000424011 ZPR1O75312 459 aa19.67■□□□□ 0.74
CMTM3-202ENST00000424011 AMIGO3Q86WK7 504 aa19.67■□□□□ 0.74
CMTM3-202ENST00000424011 TRIM44Q96DX7 344 aaPredicted RBP19.67■□□□□ 0.74
CMTM3-202ENST00000424011 TAF1LQ8IZX4 1826 aa19.66■□□□□ 0.74
CMTM3-202ENST00000424011 LAMB2P55268 1798 aa19.66■□□□□ 0.74
CMTM3-202ENST00000424011 LARGE1O95461 756 aa19.66■□□□□ 0.74
CMTM3-202ENST00000424011 HMGB1P09429 215 aaKnown RBP19.66■□□□□ 0.74
CMTM3-202ENST00000424011 ARID4AP29374 1257 aaPredicted RBP19.66■□□□□ 0.74
CMTM3-202ENST00000424011 MAST3O60307 1309 aa19.66■□□□□ 0.74
CMTM3-202ENST00000424011 CHGBP05060 677 aa19.65■□□□□ 0.74
CMTM3-202ENST00000424011 MCAMP43121 646 aa19.65■□□□□ 0.74
CMTM3-202ENST00000424011 SCARF1Q14162 830 aa19.65■□□□□ 0.74
CMTM3-202ENST00000424011 CCDC102BQ68D86 513 aa19.65■□□□□ 0.74
CMTM3-202ENST00000424011 ARHGEF1Q92888 912 aaKnown RBP19.65■□□□□ 0.74
CMTM3-202ENST00000424011 NEK1Q96PY6 1258 aa19.65■□□□□ 0.74
CMTM3-202ENST00000424011 BCL2L12Q9HB09 334 aa19.65■□□□□ 0.74
CMTM3-202ENST00000424011 SEC31BQ9NQW1 1179 aa19.65■□□□□ 0.74
CMTM3-202ENST00000424011 GTF2E1P29083 439 aaPredicted RBP19.65■□□□□ 0.74
CMTM3-202ENST00000424011 SF3B3Q15393 1217 aaKnown RBP19.65■□□□□ 0.74
CMTM3-202ENST00000424011 APPBP2Q92624 585 aa19.65■□□□□ 0.74
CMTM3-202ENST00000424011 C4BP0C0L5 1744 aa19.65■□□□□ 0.74
CMTM3-202ENST00000424011 DDX60Q8IY21 1712 aaKnown RBP19.65■□□□□ 0.74
CMTM3-202ENST00000424011 NCLP19338 710 aaKnown RBP19.64■□□□□ 0.74
CMTM3-202ENST00000424011 COL9A3Q14050 684 aaPredicted RBP19.64■□□□□ 0.74
CMTM3-202ENST00000424011 WASHC4Q2M389 1173 aa19.64■□□□□ 0.74
CMTM3-202ENST00000424011 PROM2Q8N271 834 aa19.64■□□□□ 0.74
CMTM3-202ENST00000424011 CYP21A2P08686 494 aa19.64■□□□□ 0.73
CMTM3-202ENST00000424011 HSPD1P10809 573 aaKnown RBP19.64■□□□□ 0.73
CMTM3-202ENST00000424011 ERFEQ4G0M1 354 aa19.64■□□□□ 0.73
CMTM3-202ENST00000424011 SLC10A5Q5PT55 438 aa19.64■□□□□ 0.73
CMTM3-202ENST00000424011 TRAPPC3LQ5T215 181 aa19.64■□□□□ 0.73
CMTM3-202ENST00000424011 GPT2Q8TD30 523 aa19.64■□□□□ 0.73
CMTM3-202ENST00000424011 SETDB2Q96T68 719 aa19.64■□□□□ 0.73
CMTM3-202ENST00000424011 CTNNA3Q9UI47 895 aa19.64■□□□□ 0.73
CMTM3-202ENST00000424011 SMC3Q9UQE7 1217 aa19.64■□□□□ 0.73
CMTM3-202ENST00000424011 TAF6LQ9Y6J9 622 aa19.64■□□□□ 0.73
CMTM3-202ENST00000424011 SCN7AQ01118 1682 aa19.64■□□□□ 0.73
CMTM3-202ENST00000424011 WDR33Q9C0J8 1336 aaKnown RBP19.64■□□□□ 0.73
CMTM3-202ENST00000424011 PLSCR1O15162 318 aa19.63■□□□□ 0.73
CMTM3-202ENST00000424011 FGD1P98174 961 aa19.63■□□□□ 0.73
CMTM3-202ENST00000424011 SRP68Q9UHB9 627 aaKnown RBP19.63■□□□□ 0.73
CMTM3-202ENST00000424011 PDIA4P13667 645 aaKnown RBP19.63■□□□□ 0.73
CMTM3-202ENST00000424011 TXNRD1Q16881 649 aa19.63■□□□□ 0.73
CMTM3-202ENST00000424011 TBC1D9BQ66K14 1250 aa19.63■□□□□ 0.73
CMTM3-202ENST00000424011 CAVIN1Q6NZI2 390 aaKnown RBP19.63■□□□□ 0.73
CMTM3-202ENST00000424011 OSBP2Q969R2 916 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms