RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 IRS2Q9Y4H2 1338 aa33.06■■■□□ 2.88
CDK9-202ENST00000421939 PLIN1O60240 522 aa33.06■■■□□ 2.88
CDK9-202ENST00000421939 C15orf52Q6ZUT6 534 aaKnown RBP33.06■■■□□ 2.88
CDK9-202ENST00000421939 RIPOR2Q9Y4F9 1068 aa33.06■■■□□ 2.88
CDK9-202ENST00000421939 MROH5Q6ZUA9 1318 aa33.05■■■□□ 2.88
CDK9-202ENST00000421939 SHTN1A0MZ66 631 aa33.05■■■□□ 2.88
CDK9-202ENST00000421939 USP17L3A6NCW0 530 aa33.05■■■□□ 2.88
CDK9-202ENST00000421939 USP17L4A6NCW7 530 aa33.05■■■□□ 2.88
CDK9-202ENST00000421939 H7C1D1 291 aa33.05■■■□□ 2.88
CDK9-202ENST00000421939 GNAI3P08754 354 aa33.05■■■□□ 2.88
CDK9-202ENST00000421939 USP17L1Q7RTZ2 530 aa33.05■■■□□ 2.88
CDK9-202ENST00000421939 MAP1SQ66K74 1059 aaPredicted RBP33.04■■■□□ 2.88
CDK9-202ENST00000421939 RSBN1LQ6PCB5 846 aaPredicted RBP33.04■■■□□ 2.88
CDK9-202ENST00000421939 KLHDC4Q8TBB5 520 aa33.04■■■□□ 2.88
CDK9-202ENST00000421939 RFX5P48382 616 aaPredicted RBP33.03■■■□□ 2.88
CDK9-202ENST00000421939 LRRC24Q50LG9 513 aa33.03■■■□□ 2.88
CDK9-202ENST00000421939 TRPM4Q8TD43 1214 aa33.03■■■□□ 2.88
CDK9-202ENST00000421939 AGBL3Q8NEM8 1001 aa33.02■■■□□ 2.88
CDK9-202ENST00000421939 ZNF646O15015 1829 aaPredicted RBP33.02■■■□□ 2.88
CDK9-202ENST00000421939 ITGBL1O95965 494 aaPredicted RBP33.01■■■□□ 2.87
CDK9-202ENST00000421939 UBE4AQ14139 1066 aa33.01■■■□□ 2.87
CDK9-202ENST00000421939 CNTROBQ8N137 903 aa33.01■■■□□ 2.87
CDK9-202ENST00000421939 TMEM57Q8N5G2 664 aa33.01■■■□□ 2.87
CDK9-202ENST00000421939 PASKQ96RG2 1323 aa33.01■■■□□ 2.87
CDK9-202ENST00000421939 HTRA3P83110 453 aa33■■■□□ 2.87
CDK9-202ENST00000421939 METTL24Q5JXM2 366 aa33■■■□□ 2.87
CDK9-202ENST00000421939 FTSJ3Q8IY81 847 aaKnown RBP33■■■□□ 2.87
CDK9-202ENST00000421939 PTPN12Q05209 780 aaKnown RBP32.99■■■□□ 2.87
CDK9-202ENST00000421939 ZNF804AQ7Z570 1209 aa32.99■■■□□ 2.87
CDK9-202ENST00000421939 FBXW7Q969H0 707 aa32.99■■■□□ 2.87
CDK9-202ENST00000421939 CD209Q9NNX6 404 aa32.99■■■□□ 2.87
CDK9-202ENST00000421939 HIRAP54198 1017 aaPredicted RBP32.98■■■□□ 2.87
CDK9-202ENST00000421939 DACT2Q5SW24 774 aa32.98■■■□□ 2.87
CDK9-202ENST00000421939 STRIP1Q5VSL9 837 aa32.98■■■□□ 2.87
CDK9-202ENST00000421939 SAMD7Q7Z3H4 446 aa32.98■■■□□ 2.87
CDK9-202ENST00000421939 GMLQ99445 158 aa32.98■■■□□ 2.87
CDK9-202ENST00000421939 DZIP1LQ8IYY4 767 aaKnown RBP32.97■■■□□ 2.87
CDK9-202ENST00000421939 EYA2O00167 538 aa32.96■■■□□ 2.87
CDK9-202ENST00000421939 TBC1D10BQ4KMP7 808 aaPredicted RBP32.96■■■□□ 2.87
CDK9-202ENST00000421939 VGLL2Q8N8G2 317 aa32.96■■■□□ 2.87
CDK9-202ENST00000421939 ZC3H15Q8WU90 426 aaKnown RBP32.96■■■□□ 2.87
CDK9-202ENST00000421939 ZNF280AP59817 542 aaPredicted RBP32.95■■■□□ 2.87
CDK9-202ENST00000421939 MYO3BQ8WXR4 1341 aa32.95■■■□□ 2.86
CDK9-202ENST00000421939 PDE8BO95263 885 aa32.94■■■□□ 2.86
CDK9-202ENST00000421939 EGFRP00533 1210 aa32.94■■■□□ 2.86
CDK9-202ENST00000421939 IL1R1P14778 569 aa32.94■■■□□ 2.86
CDK9-202ENST00000421939 TTLL5Q6EMB2 1281 aa32.94■■■□□ 2.86
CDK9-202ENST00000421939 MXD3Q9BW11 206 aa32.94■■■□□ 2.86
CDK9-202ENST00000421939 PGAP2Q9UHJ9 254 aa32.94■■■□□ 2.86
CDK9-202ENST00000421939 GNAI2P04899 355 aa32.93■■■□□ 2.86
CDK9-202ENST00000421939 USP17L8P0C7I0 530 aa32.93■■■□□ 2.86
CDK9-202ENST00000421939 RLBP1P12271 317 aa32.93■■■□□ 2.86
CDK9-202ENST00000421939 GTF2IP78347 998 aa32.93■■■□□ 2.86
CDK9-202ENST00000421939 KIF4BQ2VIQ3 1234 aa32.93■■■□□ 2.86
CDK9-202ENST00000421939 FBXO3Q9UK99 471 aa32.93■■■□□ 2.86
CDK9-202ENST00000421939 MTX1Q13505 466 aa32.92■■■□□ 2.86
CDK9-202ENST00000421939 RBM26Q5T8P6 1007 aaKnown RBP32.92■■■□□ 2.86
CDK9-202ENST00000421939 SIL1Q9H173 461 aa32.92■■■□□ 2.86
CDK9-202ENST00000421939 CREBZFQ9NS37 354 aa32.92■■■□□ 2.86
CDK9-202ENST00000421939 CIAO1O76071 339 aa32.91■■■□□ 2.86
CDK9-202ENST00000421939 ITPRIPQ8IWB1 547 aa32.91■■■□□ 2.86
CDK9-202ENST00000421939 DNAJC5GQ8N7S2 189 aa32.91■■■□□ 2.86
CDK9-202ENST00000421939 GYG1P46976 350 aa32.9■■■□□ 2.86
CDK9-202ENST00000421939 PUM3Q15397 648 aaKnown RBP32.9■■■□□ 2.86
CDK9-202ENST00000421939 ATG9AQ7Z3C6 839 aa32.9■■■□□ 2.86
CDK9-202ENST00000421939 RCAN3Q9UKA8 241 aa32.9■■■□□ 2.86
CDK9-202ENST00000421939 SRGAP3O43295 1099 aa32.89■■■□□ 2.86
CDK9-202ENST00000421939 HIBADHP31937 336 aaKnown RBP32.89■■■□□ 2.86
CDK9-202ENST00000421939 COPRSQ9NQ92 184 aa32.89■■■□□ 2.86
CDK9-202ENST00000421939 PA2G4Q9UQ80 394 aaKnown RBP32.89■■■□□ 2.86
CDK9-202ENST00000421939 FAM84BQ96KN1 310 aaPredicted RBP32.88■■■□□ 2.85
CDK9-202ENST00000421939 TMEM88BA6NKF7 163 aa32.87■■■□□ 2.85
CDK9-202ENST00000421939 TRAF5O00463 557 aa32.87■■■□□ 2.85
CDK9-202ENST00000421939 GLIS2Q9BZE0 524 aaPredicted RBP32.87■■■□□ 2.85
CDK9-202ENST00000421939 MYOZ2Q9NPC6 264 aa32.87■■■□□ 2.85
CDK9-202ENST00000421939 FGFR2P21802 821 aa32.86■■■□□ 2.85
CDK9-202ENST00000421939 OGFOD1Q8N543 542 aa32.86■■■□□ 2.85
CDK9-202ENST00000421939 TDRD7Q8NHU6 1098 aaKnown RBP32.86■■■□□ 2.85
CDK9-202ENST00000421939 KLRG1Q96E93 195 aa32.86■■■□□ 2.85
CDK9-202ENST00000421939 IFIT1P09914 478 aaKnown RBP32.85■■■□□ 2.85
CDK9-202ENST00000421939 IL15P40933 162 aaPredicted RBP32.85■■■□□ 2.85
CDK9-202ENST00000421939 VPS37DQ86XT2 251 aa32.85■■■□□ 2.85
CDK9-202ENST00000421939 PANK1Q8TE04 598 aa32.85■■■□□ 2.85
CDK9-202ENST00000421939 FMR1Q06787 632 aaKnown RBP eCLIP32.84■■■□□ 2.85
CDK9-202ENST00000421939 CAVIN4Q5BKX8 364 aa32.84■■■□□ 2.85
CDK9-202ENST00000421939 CDC37L1Q7L3B6 337 aa32.84■■■□□ 2.85
CDK9-202ENST00000421939 FBXO33Q7Z6M2 555 aa32.84■■■□□ 2.85
CDK9-202ENST00000421939 KIAA0825Q8IV33 1275 aa32.84■■■□□ 2.85
CDK9-202ENST00000421939 FAM205AQ6ZU69 1335 aa32.83■■■□□ 2.85
CDK9-202ENST00000421939 TRPM7Q96QT4 1865 aa32.83■■■□□ 2.85
CDK9-202ENST00000421939 SASH1O94885 1247 aa32.83■■■□□ 2.85
CDK9-202ENST00000421939 MS4A1P11836 297 aa32.83■■■□□ 2.85
CDK9-202ENST00000421939 MMP14P50281 582 aa32.83■■■□□ 2.85
CDK9-202ENST00000421939 CERS5Q8N5B7 392 aa32.83■■■□□ 2.85
CDK9-202ENST00000421939 LPIN2Q92539 896 aa32.83■■■□□ 2.85
CDK9-202ENST00000421939 GGA3Q9NZ52 723 aa32.83■■■□□ 2.85
CDK9-202ENST00000421939 CEP126Q9P2H0 1117 aa32.83■■■□□ 2.85
CDK9-202ENST00000421939 JAG2Q9Y219 1238 aa32.83■■■□□ 2.85
CDK9-202ENST00000421939 SLC5A1P13866 664 aa32.82■■■□□ 2.84
CDK9-202ENST00000421939 FKBP1AP62942 108 aaKnown RBP32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms