RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 UBE4AQ14139 1066 aa19.34■□□□□ 0.69
DDX55-203ENST00000421670 CLASRPQ8N2M8 674 aaKnown RBP19.34■□□□□ 0.69
DDX55-203ENST00000421670 LPIN2Q92539 896 aa19.34■□□□□ 0.69
DDX55-203ENST00000421670 NEUROD6Q96NK8 337 aa19.34■□□□□ 0.69
DDX55-203ENST00000421670 GPR108Q9NPR9 543 aa19.34■□□□□ 0.69
DDX55-203ENST00000421670 SLC5A1P13866 664 aa19.33■□□□□ 0.69
DDX55-203ENST00000421670 ADORA1P30542 326 aa19.33■□□□□ 0.69
DDX55-203ENST00000421670 FKBP4Q02790 459 aaKnown RBP eCLIP19.33■□□□□ 0.69
DDX55-203ENST00000421670 RASSF7Q02833 373 aa19.33■□□□□ 0.69
DDX55-203ENST00000421670 GPR162Q16538 588 aa19.33■□□□□ 0.69
DDX55-203ENST00000421670 TXNRD3Q86VQ6 643 aa19.33■□□□□ 0.69
DDX55-203ENST00000421670 CHD1LQ86WJ1 897 aa19.33■□□□□ 0.69
DDX55-203ENST00000421670 RTFDC1Q9BY42 306 aaPredicted RBP19.33■□□□□ 0.69
DDX55-203ENST00000421670 CCDC8Q9H0W5 538 aaPredicted RBP19.33■□□□□ 0.69
DDX55-203ENST00000421670 ZBTB47Q9UFB7 747 aaPredicted RBP19.33■□□□□ 0.69
DDX55-203ENST00000421670 COL4A5P29400 1685 aa19.33■□□□□ 0.69
DDX55-203ENST00000421670 MED23Q9ULK4 1368 aa19.33■□□□□ 0.68
DDX55-203ENST00000421670 TIAM2Q8IVF5 1701 aa19.33■□□□□ 0.68
DDX55-203ENST00000421670 IRS2Q9Y4H2 1338 aa19.33■□□□□ 0.68
DDX55-203ENST00000421670 GRIPAP1Q4V328 841 aa19.32■□□□□ 0.68
DDX55-203ENST00000421670 PSMD1Q99460 953 aa19.32■□□□□ 0.68
DDX55-203ENST00000421670 TAOK3Q9H2K8 898 aa19.32■□□□□ 0.68
DDX55-203ENST00000421670 DBNLQ9UJU6 430 aaKnown RBP19.32■□□□□ 0.68
DDX55-203ENST00000421670 RIMBP2O15034 1052 aa19.32■□□□□ 0.68
DDX55-203ENST00000421670 IFIT1P09914 478 aaKnown RBP19.32■□□□□ 0.68
DDX55-203ENST00000421670 ARHGAP27Q6ZUM4 889 aa19.32■□□□□ 0.68
DDX55-203ENST00000421670 C16orf71Q8IYS4 520 aaPredicted RBP19.32■□□□□ 0.68
DDX55-203ENST00000421670 OTUD7AQ8TE49 926 aaPredicted RBP19.32■□□□□ 0.68
DDX55-203ENST00000421670 DBNDD2Q9BQY9 259 aa19.32■□□□□ 0.68
DDX55-203ENST00000421670 ZNF277Q9NRM2 450 aaPredicted RBP19.32■□□□□ 0.68
DDX55-203ENST00000421670 WASHC4Q2M389 1173 aa19.31■□□□□ 0.68
DDX55-203ENST00000421670 XAGE2Q96GT9 111 aa19.31■□□□□ 0.68
DDX55-203ENST00000421670 SCN9AQ15858 1988 aa19.31■□□□□ 0.68
DDX55-203ENST00000421670 ZNF646O15015 1829 aaPredicted RBP19.3■□□□□ 0.68
DDX55-203ENST00000421670 AKAP11Q9UKA4 1901 aa19.3■□□□□ 0.68
DDX55-203ENST00000421670 IFIT2P09913 472 aaKnown RBP19.3■□□□□ 0.68
DDX55-203ENST00000421670 GYG1P46976 350 aa19.3■□□□□ 0.68
DDX55-203ENST00000421670 AOC3Q16853 763 aa19.3■□□□□ 0.68
DDX55-203ENST00000421670 SKAP1Q86WV1 359 aa19.3■□□□□ 0.68
DDX55-203ENST00000421670 SUPT20HQ8NEM7 779 aa19.3■□□□□ 0.68
DDX55-203ENST00000421670 PSME4Q14997 1843 aa19.3■□□□□ 0.68
DDX55-203ENST00000421670 LTBP3Q9NS15 1303 aa19.3■□□□□ 0.68
DDX55-203ENST00000421670 EYA3Q99504 573 aa19.29■□□□□ 0.68
DDX55-203ENST00000421670 PPIP5K2O43314 1243 aa19.28■□□□□ 0.68
DDX55-203ENST00000421670 PRELPP51888 382 aa19.28■□□□□ 0.68
DDX55-203ENST00000421670 ZC3H12CQ9C0D7 883 aaKnown RBP19.28■□□□□ 0.68
DDX55-203ENST00000421670 PDE4AP27815 886 aa19.27■□□□□ 0.68
DDX55-203ENST00000421670 PHKA1P46020 1223 aa19.27■□□□□ 0.68
DDX55-203ENST00000421670 BCAMP50895 628 aa19.27■□□□□ 0.68
DDX55-203ENST00000421670 KIAA2012Q0VF49 1180 aa19.27■□□□□ 0.68
DDX55-203ENST00000421670 GORABQ5T7V8 394 aa19.27■□□□□ 0.68
DDX55-203ENST00000421670 TSHZ3Q63HK5 1081 aa19.27■□□□□ 0.68
DDX55-203ENST00000421670 C15orf52Q6ZUT6 534 aaKnown RBP19.27■□□□□ 0.68
DDX55-203ENST00000421670 FAM84BQ96KN1 310 aaPredicted RBP19.27■□□□□ 0.68
DDX55-203ENST00000421670 IARSP41252 1262 aaKnown RBP19.27■□□□□ 0.67
DDX55-203ENST00000421670 CAVIN4Q5BKX8 364 aa19.27■□□□□ 0.67
DDX55-203ENST00000421670 CCDC102BQ68D86 513 aa19.27■□□□□ 0.67
DDX55-203ENST00000421670 MYO5AQ9Y4I1 1855 aaKnown RBP19.27■□□□□ 0.67
DDX55-203ENST00000421670 SALL3Q9BXA9 1300 aa19.26■□□□□ 0.67
DDX55-203ENST00000421670 AK9Q5TCS8 1911 aa19.26■□□□□ 0.67
DDX55-203ENST00000421670 DOK7Q18PE1 504 aa19.26■□□□□ 0.67
DDX55-203ENST00000421670 ZNF804AQ7Z570 1209 aa19.26■□□□□ 0.67
DDX55-203ENST00000421670 VPS37DQ86XT2 251 aa19.26■□□□□ 0.67
DDX55-203ENST00000421670 LARGE2Q8N3Y3 721 aa19.26■□□□□ 0.67
DDX55-203ENST00000421670 DBNDD1Q9H9R9 158 aa19.26■□□□□ 0.67
DDX55-203ENST00000421670 IQSEC3Q9UPP2 1182 aaPredicted RBP19.26■□□□□ 0.67
DDX55-203ENST00000421670 MX1P20591 662 aa19.25■□□□□ 0.67
DDX55-203ENST00000421670 HIBADHP31937 336 aaKnown RBP19.25■□□□□ 0.67
DDX55-203ENST00000421670 FBXO33Q7Z6M2 555 aa19.25■□□□□ 0.67
DDX55-203ENST00000421670 COL1A1P02452 1464 aaPredicted RBP19.25■□□□□ 0.67
DDX55-203ENST00000421670 GRIN3BO60391 1043 aa19.24■□□□□ 0.67
DDX55-203ENST00000421670 TTC39AQ5SRH9 613 aa19.24■□□□□ 0.67
DDX55-203ENST00000421670 CCDC158Q5M9N0 1113 aa19.23■□□□□ 0.67
DDX55-203ENST00000421670 G3V3G9 751 aa19.23■□□□□ 0.67
DDX55-203ENST00000421670 ECE2O60344 883 aa19.23■□□□□ 0.67
DDX55-203ENST00000421670 SCARF1Q14162 830 aa19.23■□□□□ 0.67
DDX55-203ENST00000421670 DCAF8Q5TAQ9 597 aa19.23■□□□□ 0.67
DDX55-203ENST00000421670 GPATCH3Q96I76 525 aa19.23■□□□□ 0.67
DDX55-203ENST00000421670 COA1Q9GZY4 146 aa19.23■□□□□ 0.67
DDX55-203ENST00000421670 CD209Q9NNX6 404 aa19.23■□□□□ 0.67
DDX55-203ENST00000421670 LMNB1P20700 586 aa19.22■□□□□ 0.67
DDX55-203ENST00000421670 ARID4AP29374 1257 aaPredicted RBP19.22■□□□□ 0.67
DDX55-203ENST00000421670 PDE1AP54750 535 aa19.22■□□□□ 0.67
DDX55-203ENST00000421670 PI16Q6UXB8 463 aa19.22■□□□□ 0.67
DDX55-203ENST00000421670 PLEKHM2Q8IWE5 1019 aa19.22■□□□□ 0.67
DDX55-203ENST00000421670 VPS33BQ9H267 617 aa19.22■□□□□ 0.67
DDX55-203ENST00000421670 ECHDC1Q9NTX5 307 aa19.22■□□□□ 0.67
DDX55-203ENST00000421670 DOCK2Q92608 1830 aa19.22■□□□□ 0.67
DDX55-203ENST00000421670 MYH7P12883 1935 aa19.21■□□□□ 0.67
DDX55-203ENST00000421670 MCAMP43121 646 aa19.21■□□□□ 0.67
DDX55-203ENST00000421670 RGS3P49796 1198 aa19.21■□□□□ 0.67
DDX55-203ENST00000421670 RASGRF1Q13972 1273 aa19.21■□□□□ 0.67
DDX55-203ENST00000421670 NIM1KQ8IY84 436 aa19.21■□□□□ 0.67
DDX55-203ENST00000421670 JAG2Q9Y219 1238 aa19.21■□□□□ 0.67
DDX55-203ENST00000421670 YDJCA8MPS7 323 aa19.2■□□□□ 0.66
DDX55-203ENST00000421670 FRAT2O75474 233 aaPredicted RBP19.2■□□□□ 0.66
DDX55-203ENST00000421670 IL1R1P14778 569 aa19.2■□□□□ 0.66
DDX55-203ENST00000421670 PI4K2BQ8TCG2 481 aa19.2■□□□□ 0.66
DDX55-203ENST00000421670 GNL3LQ9NVN8 582 aaKnown RBP19.2■□□□□ 0.66
DDX55-203ENST00000421670 RNF181Q9P0P0 153 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms