RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 GIGYF1O75420 1035 aaPredicted RBP19.31■□□□□ 0.68
PKP4-204ENST00000421462 MARCKSP29966 332 aaPredicted RBP19.31■□□□□ 0.68
PKP4-204ENST00000421462 TPM4P67936 248 aa19.31■□□□□ 0.68
PKP4-204ENST00000421462 KAZALD1Q96I82 304 aa19.31■□□□□ 0.68
PKP4-204ENST00000421462 KIAA1468Q9P260 1216 aa19.31■□□□□ 0.68
PKP4-204ENST00000421462 DBF4Q9UBU7 674 aaPredicted RBP19.31■□□□□ 0.68
PKP4-204ENST00000421462 DPF2Q92785 391 aa19.31■□□□□ 0.68
PKP4-204ENST00000421462 FANCCQ00597 558 aa19.31■□□□□ 0.68
PKP4-204ENST00000421462 CCDC93Q567U6 631 aa19.31■□□□□ 0.68
PKP4-204ENST00000421462 STK11IPQ8N1F8 1099 aa19.31■□□□□ 0.68
PKP4-204ENST00000421462 TRIM66O15016 1216 aa19.3■□□□□ 0.68
PKP4-204ENST00000421462 SASH3O75995 380 aa19.3■□□□□ 0.68
PKP4-204ENST00000421462 RIC3Q7Z5B4 369 aa19.3■□□□□ 0.68
PKP4-204ENST00000421462 FMR1NBQ8N0W7 255 aaPredicted RBP19.3■□□□□ 0.68
PKP4-204ENST00000421462 FEZ2Q9UHY8 353 aaPredicted RBP19.3■□□□□ 0.68
PKP4-204ENST00000421462 LMAN1P49257 510 aa19.3■□□□□ 0.68
PKP4-204ENST00000421462 IPO4Q8TEX9 1081 aaKnown RBP19.3■□□□□ 0.68
PKP4-204ENST00000421462 MED23Q9ULK4 1368 aa19.29■□□□□ 0.68
PKP4-204ENST00000421462 FANCGO15287 622 aa19.29■□□□□ 0.68
PKP4-204ENST00000421462 UBASH3AP57075 661 aa19.29■□□□□ 0.68
PKP4-204ENST00000421462 GNG11P61952 73 aa19.29■□□□□ 0.68
PKP4-204ENST00000421462 ZNF530Q6P9A1 599 aaPredicted RBP19.29■□□□□ 0.68
PKP4-204ENST00000421462 KSR2Q6VAB6 950 aa19.29■□□□□ 0.68
PKP4-204ENST00000421462 CCDC191Q8NCU4 936 aa19.29■□□□□ 0.68
PKP4-204ENST00000421462 ILDR1Q86SU0 546 aaPredicted RBP19.29■□□□□ 0.68
PKP4-204ENST00000421462 IMPACTQ9P2X3 320 aa19.29■□□□□ 0.68
PKP4-204ENST00000421462 PXDNLA1KZ92 1463 aa19.29■□□□□ 0.68
PKP4-204ENST00000421462 MTX1Q13505 466 aa19.28■□□□□ 0.68
PKP4-204ENST00000421462 SMC1AQ14683 1233 aaKnown RBP19.28■□□□□ 0.68
PKP4-204ENST00000421462 LRRC59Q96AG4 307 aaKnown RBP19.28■□□□□ 0.68
PKP4-204ENST00000421462 NEUROD6Q96NK8 337 aa19.28■□□□□ 0.68
PKP4-204ENST00000421462 DBNLQ9UJU6 430 aaKnown RBP19.28■□□□□ 0.68
PKP4-204ENST00000421462 USP31Q70CQ4 1352 aa19.28■□□□□ 0.68
PKP4-204ENST00000421462 PSDA5PKW4 1024 aaPredicted RBP19.28■□□□□ 0.68
PKP4-204ENST00000421462 TMEM232C9JQI7 657 aa19.28■□□□□ 0.68
PKP4-204ENST00000421462 TFCP2Q12800 502 aa19.28■□□□□ 0.68
PKP4-204ENST00000421462 TULP2O00295 520 aa19.28■□□□□ 0.68
PKP4-204ENST00000421462 SKIDA1Q1XH10 827 aa19.28■□□□□ 0.68
PKP4-204ENST00000421462 EPHA10Q5JZY3 1008 aa19.28■□□□□ 0.68
PKP4-204ENST00000421462 DBNDD2Q9BQY9 259 aa19.28■□□□□ 0.68
PKP4-204ENST00000421462 LCMT1Q9UIC8 334 aa19.28■□□□□ 0.68
PKP4-204ENST00000421462 PFKFB2O60825 505 aa19.27■□□□□ 0.68
PKP4-204ENST00000421462 HAND2P61296 217 aa19.27■□□□□ 0.68
PKP4-204ENST00000421462 ZNF202O95125 648 aa19.27■□□□□ 0.68
PKP4-204ENST00000421462 ZRANB2O95218 330 aaKnown RBP eCLIP19.27■□□□□ 0.683e-7■■■■□ 25.7
PKP4-204ENST00000421462 NAA16Q6N069 864 aaPredicted RBP19.27■□□□□ 0.68
PKP4-204ENST00000421462 SMARCC2Q8TAQ2 1214 aa19.27■□□□□ 0.68
PKP4-204ENST00000421462 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
PKP4-204ENST00000421462 ALDH1L1O75891 902 aa19.26■□□□□ 0.67
PKP4-204ENST00000421462 KARSQ15046 597 aaKnown RBP19.26■□□□□ 0.67
PKP4-204ENST00000421462 ZSCAN26Q16670 478 aa19.26■□□□□ 0.67
PKP4-204ENST00000421462 DHX32Q7L7V1 743 aaKnown RBP19.26■□□□□ 0.67
PKP4-204ENST00000421462 RSPH14Q9UHP6 348 aa19.26■□□□□ 0.67
PKP4-204ENST00000421462 ADGRL3Q9HAR2 1447 aa19.26■□□□□ 0.67
PKP4-204ENST00000421462 NBPF6Q5VWK0 638 aa19.26■□□□□ 0.67
PKP4-204ENST00000421462 NBPF4Q96M43 638 aa19.26■□□□□ 0.67
PKP4-204ENST00000421462 TADA3O75528 432 aa19.26■□□□□ 0.67
PKP4-204ENST00000421462 MCMDC2Q4G0Z9 681 aa19.26■□□□□ 0.67
PKP4-204ENST00000421462 TTLL5Q6EMB2 1281 aa19.26■□□□□ 0.67
PKP4-204ENST00000421462 WDR24Q96S15 920 aa19.26■□□□□ 0.67
PKP4-204ENST00000421462 AKAP12Q02952 1782 aa19.26■□□□□ 0.67
PKP4-204ENST00000421462 GOLIM4O00461 696 aa19.25■□□□□ 0.67
PKP4-204ENST00000421462 GPS2Q13227 327 aa19.25■□□□□ 0.67
PKP4-204ENST00000421462 MCM6Q14566 821 aa19.25■□□□□ 0.67
PKP4-204ENST00000421462 ADALQ6DHV7 355 aa19.25■□□□□ 0.67
PKP4-204ENST00000421462 SYNE3Q6ZMZ3 975 aa19.25■□□□□ 0.67
PKP4-204ENST00000421462 DESI2Q9BSY9 194 aa19.25■□□□□ 0.67
PKP4-204ENST00000421462 TBC1D8O95759 1140 aa19.25■□□□□ 0.67
PKP4-204ENST00000421462 TOP1P11387 765 aaKnown RBP19.25■□□□□ 0.67
PKP4-204ENST00000421462 TRIM65Q6PJ69 517 aa19.25■□□□□ 0.67
PKP4-204ENST00000421462 RGPD1P0DJD0 1748 aa19.25■□□□□ 0.67
PKP4-204ENST00000421462 SPTLC2O15270 562 aa19.24■□□□□ 0.67
PKP4-204ENST00000421462 CACNA1FO60840 1977 aa19.24■□□□□ 0.67
PKP4-204ENST00000421462 TXLNBQ8N3L3 684 aa19.24■□□□□ 0.67
PKP4-204ENST00000421462 ALDH8A1Q9H2A2 487 aaPredicted RBP19.24■□□□□ 0.67
PKP4-204ENST00000421462 CASQ1P31415 396 aa19.24■□□□□ 0.67
PKP4-204ENST00000421462 HDGFP51858 240 aaKnown RBP19.24■□□□□ 0.67
PKP4-204ENST00000421462 MYD88Q99836 296 aa19.24■□□□□ 0.67
PKP4-204ENST00000421462 PARP3Q9Y6F1 533 aa19.24■□□□□ 0.67
PKP4-204ENST00000421462 ZNF609O15014 1411 aa19.24■□□□□ 0.67
PKP4-204ENST00000421462 CC2D1AQ6P1N0 951 aaPredicted RBP19.23■□□□□ 0.67
PKP4-204ENST00000421462 C8orf76Q96K31 380 aa19.23■□□□□ 0.67
PKP4-204ENST00000421462 ARFGAP3Q9NP61 516 aa19.23■□□□□ 0.67
PKP4-204ENST00000421462 ADKP55263 362 aaKnown RBP19.23■□□□□ 0.67
PKP4-204ENST00000421462 NCAPHQ15003 741 aa19.23■□□□□ 0.67
PKP4-204ENST00000421462 LRRFIP1Q32MZ4 808 aaKnown RBP19.23■□□□□ 0.67
PKP4-204ENST00000421462 TSGA10IPQ3SY00 556 aa19.23■□□□□ 0.67
PKP4-204ENST00000421462 LINC00301Q8NCQ3 95 aa19.23■□□□□ 0.67
PKP4-204ENST00000421462 LINS1Q8NG48 757 aa19.23■□□□□ 0.67
PKP4-204ENST00000421462 IRX2Q9BZI1 471 aaPredicted RBP19.23■□□□□ 0.67
PKP4-204ENST00000421462 PDIA3P30101 505 aaKnown RBP19.23■□□□□ 0.67
PKP4-204ENST00000421462 NLRP12P59046 1061 aa19.23■□□□□ 0.67
PKP4-204ENST00000421462 PNOCQ13519 176 aa19.23■□□□□ 0.67
PKP4-204ENST00000421462 PARD6BQ9BYG5 372 aa19.23■□□□□ 0.67
PKP4-204ENST00000421462 ANKRD65E5RJM6 399 aa19.22■□□□□ 0.67
PKP4-204ENST00000421462 PPP2R3AQ06190 1150 aa19.22■□□□□ 0.67
PKP4-204ENST00000421462 SLC39A6Q13433 755 aa19.22■□□□□ 0.67
PKP4-204ENST00000421462 USPL1Q5W0Q7 1092 aa19.22■□□□□ 0.67
PKP4-204ENST00000421462 PUF60Q9UHX1 559 aaKnown RBP19.22■□□□□ 0.67
PKP4-204ENST00000421462 EFCAB8A8MWE9 144 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms