RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 C9orf78Q9NZ63 289 aaPredicted RBP27.04■■□□□ 1.92
PTPN4-202ENST00000420482 CHMP3Q9Y3E7 222 aa27.04■■□□□ 1.92
PTPN4-202ENST00000420482 SCN9AQ15858 1988 aa27.04■■□□□ 1.92
PTPN4-202ENST00000420482 ZNF804BA4D1E1 1349 aa27.03■■□□□ 1.92
PTPN4-202ENST00000420482 ALDH1L1O75891 902 aa27.03■■□□□ 1.92
PTPN4-202ENST00000420482 USP17L8P0C7I0 530 aa27.03■■□□□ 1.92
PTPN4-202ENST00000420482 SULF1Q8IWU6 871 aa27.03■■□□□ 1.92
PTPN4-202ENST00000420482 ZNF521Q96K83 1311 aa27.03■■□□□ 1.92
PTPN4-202ENST00000420482 PSME4Q14997 1843 aa27.02■■□□□ 1.92
PTPN4-202ENST00000420482 MYO3BQ8WXR4 1341 aa27.02■■□□□ 1.92
PTPN4-202ENST00000420482 GRM8O00222 908 aa27.02■■□□□ 1.92
PTPN4-202ENST00000420482 ZNF280AP59817 542 aaPredicted RBP27.02■■□□□ 1.92
PTPN4-202ENST00000420482 SLC4A10Q6U841 1118 aa27.02■■□□□ 1.92
PTPN4-202ENST00000420482 E9PSI1 815 aa27.01■■□□□ 1.91
PTPN4-202ENST00000420482 EGFRP00533 1210 aa27.01■■□□□ 1.91
PTPN4-202ENST00000420482 MAP2K2P36507 400 aa27.01■■□□□ 1.91
PTPN4-202ENST00000420482 OGFOD1Q8N543 542 aa27.01■■□□□ 1.91
PTPN4-202ENST00000420482 SRCIN1Q9C0H9 1055 aa27.01■■□□□ 1.91
PTPN4-202ENST00000420482 MMP14P50281 582 aa27■■□□□ 1.91
PTPN4-202ENST00000420482 CCDC57Q2TAC2 916 aa27■■□□□ 1.91
PTPN4-202ENST00000420482 TAF7LQ5H9L4 462 aa27■■□□□ 1.91
PTPN4-202ENST00000420482 FBXW7Q969H0 707 aa27■■□□□ 1.91
PTPN4-202ENST00000420482 FOXO4P98177 505 aa26.99■■□□□ 1.91
PTPN4-202ENST00000420482 CHRNDQ07001 517 aa26.99■■□□□ 1.91
PTPN4-202ENST00000420482 STRIP1Q5VSL9 837 aa26.99■■□□□ 1.91
PTPN4-202ENST00000420482 C2orf69Q8N8R5 385 aa26.99■■□□□ 1.91
PTPN4-202ENST00000420482 MYOZ2Q9NPC6 264 aa26.99■■□□□ 1.91
PTPN4-202ENST00000420482 GGA3Q9NZ52 723 aa26.99■■□□□ 1.91
PTPN4-202ENST00000420482 GMLQ99445 158 aa26.98■■□□□ 1.91
PTPN4-202ENST00000420482 SCARF1Q14162 830 aa26.97■■□□□ 1.91
PTPN4-202ENST00000420482 LMBR1LQ6UX01 489 aa26.97■■□□□ 1.91
PTPN4-202ENST00000420482 WTIPA6NIX2 430 aaPredicted RBP26.96■■□□□ 1.91
PTPN4-202ENST00000420482 AOC2O75106 756 aa26.96■■□□□ 1.91
PTPN4-202ENST00000420482 HUNKP57058 714 aa26.96■■□□□ 1.91
PTPN4-202ENST00000420482 GBA2Q9HCG7 927 aaPredicted RBP26.96■■□□□ 1.91
PTPN4-202ENST00000420482 PTPRCP08575 1304 aa26.95■■□□□ 1.91
PTPN4-202ENST00000420482 ADM5C9JUS6 153 aa26.95■■□□□ 1.9
PTPN4-202ENST00000420482 DACT2Q5SW24 774 aa26.95■■□□□ 1.9
PTPN4-202ENST00000420482 ANGEL2Q5VTE6 544 aaKnown RBP26.95■■□□□ 1.9
PTPN4-202ENST00000420482 TTLL5Q6EMB2 1281 aa26.95■■□□□ 1.9
PTPN4-202ENST00000420482 ABHD8Q96I13 439 aa26.95■■□□□ 1.9
PTPN4-202ENST00000420482 PITPNM2Q9BZ72 1349 aa26.94■■□□□ 1.9
PTPN4-202ENST00000420482 LDHAL6AQ6ZMR3 332 aa26.94■■□□□ 1.9
PTPN4-202ENST00000420482 HDAC9Q9UKV0 1011 aa26.94■■□□□ 1.9
PTPN4-202ENST00000420482 CASP8AP2Q9UKL3 1982 aa26.94■■□□□ 1.9
PTPN4-202ENST00000420482 CA12O43570 354 aa26.93■■□□□ 1.9
PTPN4-202ENST00000420482 NOGQ13253 232 aa26.93■■□□□ 1.9
PTPN4-202ENST00000420482 TXNRD3Q86VQ6 643 aa26.93■■□□□ 1.9
PTPN4-202ENST00000420482 CNNM1Q9NRU3 951 aa26.93■■□□□ 1.9
PTPN4-202ENST00000420482 ZNF804AQ7Z570 1209 aa26.92■■□□□ 1.9
PTPN4-202ENST00000420482 BRPF1P55201 1214 aaPredicted RBP26.91■■□□□ 1.9
PTPN4-202ENST00000420482 C15orf52Q6ZUT6 534 aaKnown RBP26.91■■□□□ 1.9
PTPN4-202ENST00000420482 MRPL50Q8N5N7 158 aaKnown RBP26.91■■□□□ 1.9
PTPN4-202ENST00000420482 CCDC102AQ96A19 550 aa26.91■■□□□ 1.9
PTPN4-202ENST00000420482 TAF5LO75529 589 aa26.9■■□□□ 1.9
PTPN4-202ENST00000420482 SLFN5Q08AF3 891 aa26.9■■□□□ 1.9
PTPN4-202ENST00000420482 RGMBQ6NW40 437 aa26.9■■□□□ 1.9
PTPN4-202ENST00000420482 CDCA5Q96FF9 252 aa26.9■■□□□ 1.9
PTPN4-202ENST00000420482 CD209Q9NNX6 404 aa26.9■■□□□ 1.9
PTPN4-202ENST00000420482 GTF2IP78347 998 aa26.89■■□□□ 1.9
PTPN4-202ENST00000420482 EPHA10Q5JZY3 1008 aa26.89■■□□□ 1.9
PTPN4-202ENST00000420482 DLK2Q6UY11 383 aa26.89■■□□□ 1.9
PTPN4-202ENST00000420482 HELBQ8NG08 1087 aaPredicted RBP26.89■■□□□ 1.9
PTPN4-202ENST00000420482 ASTN2O75129 1339 aaPredicted RBP26.89■■□□□ 1.89
PTPN4-202ENST00000420482 CCER2I3L3R5 266 aa26.88■■□□□ 1.89
PTPN4-202ENST00000420482 KLRK1P26718 216 aa26.88■■□□□ 1.89
PTPN4-202ENST00000420482 FKBP1BP68106 108 aa26.88■■□□□ 1.89
PTPN4-202ENST00000420482 TSKSQ9UJT2 592 aa26.88■■□□□ 1.89
PTPN4-202ENST00000420482 PLIN1O60240 522 aa26.87■■□□□ 1.89
PTPN4-202ENST00000420482 ALDH1L2Q3SY69 923 aa26.87■■□□□ 1.89
PTPN4-202ENST00000420482 MXD3Q9BW11 206 aa26.87■■□□□ 1.89
PTPN4-202ENST00000420482 UTYO14607 1347 aa26.87■■□□□ 1.89
PTPN4-202ENST00000420482 ZNF157P51786 506 aaPredicted RBP26.86■■□□□ 1.89
PTPN4-202ENST00000420482 KIAA0825Q8IV33 1275 aa26.86■■□□□ 1.89
PTPN4-202ENST00000420482 SUCLG2Q96I99 432 aa26.86■■□□□ 1.89
PTPN4-202ENST00000420482 ZNF594Q96JF6 807 aaPredicted RBP26.86■■□□□ 1.89
PTPN4-202ENST00000420482 AKAP11Q9UKA4 1901 aa26.86■■□□□ 1.89
PTPN4-202ENST00000420482 ZNF646O15015 1829 aaPredicted RBP26.86■■□□□ 1.89
PTPN4-202ENST00000420482 NBPF7P0C2Y1 421 aaPredicted RBP26.85■■□□□ 1.89
PTPN4-202ENST00000420482 NF2P35240 595 aa26.85■■□□□ 1.89
PTPN4-202ENST00000420482 NBPF9Q3BBW0 867 aa26.85■■□□□ 1.89
PTPN4-202ENST00000420482 SSH1Q8WYL5 1049 aa26.85■■□□□ 1.89
PTPN4-202ENST00000420482 WNT10BO00744 389 aa26.84■■□□□ 1.89
PTPN4-202ENST00000420482 CT47B1P0C2W7 299 aaPredicted RBP26.84■■□□□ 1.89
PTPN4-202ENST00000420482 IL1R1P14778 569 aa26.83■■□□□ 1.89
PTPN4-202ENST00000420482 UBE4AQ14139 1066 aa26.83■■□□□ 1.89
PTPN4-202ENST00000420482 SMC4Q9NTJ3 1288 aa26.83■■□□□ 1.89
PTPN4-202ENST00000420482 A0A1B0GUL6 1792 aa26.83■■□□□ 1.89
PTPN4-202ENST00000420482 MROH5Q6ZUA9 1318 aa26.83■■□□□ 1.89
PTPN4-202ENST00000420482 SNAP23O00161 211 aa26.82■■□□□ 1.88
PTPN4-202ENST00000420482 APOBEC3FQ8IUX4 373 aaKnown RBP26.82■■□□□ 1.88
PTPN4-202ENST00000420482 IRS2Q9Y4H2 1338 aa26.82■■□□□ 1.88
PTPN4-202ENST00000420482 FKBP1AP62942 108 aaKnown RBP26.81■■□□□ 1.88
PTPN4-202ENST00000420482 BICC1Q9H694 974 aaKnown RBP26.81■■□□□ 1.88
PTPN4-202ENST00000420482 PAPPA2Q9BXP8 1791 aa26.8■■□□□ 1.88
PTPN4-202ENST00000420482 SASH1O94885 1247 aa26.8■■□□□ 1.88
PTPN4-202ENST00000420482 DLGAP5Q15398 846 aa26.8■■□□□ 1.88
PTPN4-202ENST00000420482 RABL6Q3YEC7 729 aaPredicted RBP26.8■■□□□ 1.88
PTPN4-202ENST00000420482 REM2Q8IYK8 340 aaPredicted RBP26.8■■□□□ 1.88
PTPN4-202ENST00000420482 ZIC5Q96T25 663 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms