RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 ALDH1B1P30837 517 aa9.97□□□□□ -0.81
MDC1-203ENST00000417033 CENPQQ7L2Z9 268 aaPredicted RBP9.97□□□□□ -0.81
MDC1-203ENST00000417033 GCC1Q96CN9 775 aa9.97□□□□□ -0.81
MDC1-203ENST00000417033 PIM2Q9P1W9 311 aa9.97□□□□□ -0.81
MDC1-203ENST00000417033 TAOK2Q9UL54 1235 aa9.97□□□□□ -0.81
MDC1-203ENST00000417033 BCS1LQ9Y276 419 aa9.97□□□□□ -0.81
MDC1-203ENST00000417033 ATP6V0A2Q9Y487 856 aa9.97□□□□□ -0.81
MDC1-203ENST00000417033 RAB11FIP3O75154 756 aa9.96□□□□□ -0.82
MDC1-203ENST00000417033 NUCB1Q02818 461 aa9.96□□□□□ -0.82
MDC1-203ENST00000417033 TNNI3KQ59H18 835 aa9.96□□□□□ -0.82
MDC1-203ENST00000417033 TSHZ3Q63HK5 1081 aa9.96□□□□□ -0.82
MDC1-203ENST00000417033 SP8Q8IXZ3 490 aa9.96□□□□□ -0.82
MDC1-203ENST00000417033 EAF2Q96CJ1 260 aaPredicted RBP9.96□□□□□ -0.82
MDC1-203ENST00000417033 KIF1BPQ96EK5 621 aa9.96□□□□□ -0.82
MDC1-203ENST00000417033 LRRCC1Q9C099 1032 aa9.96□□□□□ -0.82
MDC1-203ENST00000417033 CCDC8Q9H0W5 538 aaPredicted RBP9.96□□□□□ -0.82
MDC1-203ENST00000417033 CEP126Q9P2H0 1117 aa9.96□□□□□ -0.82
MDC1-203ENST00000417033 FPGT-TNNI3KV9GXZ4 949 aa9.96□□□□□ -0.82
MDC1-203ENST00000417033 PDE8BO95263 885 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 YBX3P16989 372 aaKnown RBP eCLIP9.95□□□□□ -0.82
MDC1-203ENST00000417033 FGFR2P21802 821 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 TIMM10P62072 90 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 ATP2B3Q16720 1220 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 HSP90AB4PQ58FF6 505 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 DALRD3Q5D0E6 543 aaKnown RBP9.95□□□□□ -0.82
MDC1-203ENST00000417033 AACSQ86V21 672 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 TXNRD3Q86VQ6 643 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 CHD1LQ86WJ1 897 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 ERC1Q8IUD2 1116 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 DBNDD2Q9BQY9 259 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 POLLQ9UGP5 575 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 DBNLQ9UJU6 430 aaKnown RBP9.95□□□□□ -0.82
MDC1-203ENST00000417033 NSFL1CQ9UNZ2 370 aaKnown RBP9.95□□□□□ -0.82
MDC1-203ENST00000417033 MROH5Q6ZUA9 1318 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 IRS2Q9Y4H2 1338 aa9.95□□□□□ -0.82
MDC1-203ENST00000417033 XDHP47989 1333 aa9.94□□□□□ -0.82
MDC1-203ENST00000417033 A0A1B0GUL7 405 aa9.94□□□□□ -0.82
MDC1-203ENST00000417033 UFL1O94874 794 aa9.94□□□□□ -0.82
MDC1-203ENST00000417033 RASSF7Q02833 373 aa9.94□□□□□ -0.82
MDC1-203ENST00000417033 PELP1Q8IZL8 1130 aaKnown RBP9.94□□□□□ -0.82
MDC1-203ENST00000417033 TBC1D16Q8TBP0 767 aa9.94□□□□□ -0.82
MDC1-203ENST00000417033 ANKIB1Q9P2G1 1089 aa9.94□□□□□ -0.82
MDC1-203ENST00000417033 ZNF804BA4D1E1 1349 aa9.93□□□□□ -0.82
MDC1-203ENST00000417033 SALL3Q9BXA9 1300 aa9.93□□□□□ -0.82
MDC1-203ENST00000417033 NFKBIEO00221 500 aa9.93□□□□□ -0.82
MDC1-203ENST00000417033 CD44P16070 742 aaKnown RBP9.93□□□□□ -0.82
MDC1-203ENST00000417033 PRELPP51888 382 aa9.93□□□□□ -0.82
MDC1-203ENST00000417033 PUM3Q15397 648 aaKnown RBP9.93□□□□□ -0.82
MDC1-203ENST00000417033 CCDC93Q567U6 631 aa9.93□□□□□ -0.82
MDC1-203ENST00000417033 DPP8Q6V1X1 898 aaPredicted RBP9.93□□□□□ -0.82
MDC1-203ENST00000417033 TMC4Q7Z404 712 aa9.93□□□□□ -0.82
MDC1-203ENST00000417033 MPNDQ8N594 471 aa9.93□□□□□ -0.82
MDC1-203ENST00000417033 NEUROD6Q96NK8 337 aa9.93□□□□□ -0.82
MDC1-203ENST00000417033 ANKRD2Q9GZV1 360 aa9.93□□□□□ -0.82
MDC1-203ENST00000417033 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
MDC1-203ENST00000417033 COL4A5P29400 1685 aa9.93□□□□□ -0.82
MDC1-203ENST00000417033 C6orf229H3BNL8 230 aa9.92□□□□□ -0.82
MDC1-203ENST00000417033 SLC5A1P13866 664 aa9.92□□□□□ -0.82
MDC1-203ENST00000417033 ATP2B4P23634 1241 aa9.92□□□□□ -0.82
MDC1-203ENST00000417033 PHKA1P46020 1223 aa9.92□□□□□ -0.82
MDC1-203ENST00000417033 GYG1P46976 350 aa9.92□□□□□ -0.82
MDC1-203ENST00000417033 KCNJ4P48050 445 aa9.92□□□□□ -0.82
MDC1-203ENST00000417033 RGS3P49796 1198 aa9.92□□□□□ -0.82
MDC1-203ENST00000417033 CLASRPQ8N2M8 674 aaKnown RBP9.92□□□□□ -0.82
MDC1-203ENST00000417033 XAGE2Q96GT9 111 aa9.92□□□□□ -0.82
MDC1-203ENST00000417033 GPR108Q9NPR9 543 aa9.92□□□□□ -0.82
MDC1-203ENST00000417033 GGA1Q9UJY5 639 aa9.92□□□□□ -0.82
MDC1-203ENST00000417033 ARAP2Q8WZ64 1704 aa9.92□□□□□ -0.82
MDC1-203ENST00000417033 COL1A1P02452 1464 aaPredicted RBP9.91□□□□□ -0.82
MDC1-203ENST00000417033 RIOK3O14730 519 aaKnown RBP9.91□□□□□ -0.82
MDC1-203ENST00000417033 RIMBP2O15034 1052 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 PYGBP11216 843 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 BCAMP50895 628 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 UBE4AQ14139 1066 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 SCARF1Q14162 830 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 AOC3Q16853 763 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 PI16Q6UXB8 463 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 PLEKHM2Q8IWE5 1019 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 LPIN2Q92539 896 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 ZNF277Q9NRM2 450 aaPredicted RBP9.91□□□□□ -0.82
MDC1-203ENST00000417033 IQSEC3Q9UPP2 1182 aaPredicted RBP9.91□□□□□ -0.82
MDC1-203ENST00000417033 LEMD3Q9Y2U8 911 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 NDUFB9Q9Y6M9 179 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 ARFGEF1Q9Y6D6 1849 aa9.91□□□□□ -0.82
MDC1-203ENST00000417033 IFIT2P09913 472 aaKnown RBP9.9□□□□□ -0.82
MDC1-203ENST00000417033 IFIT1P09914 478 aaKnown RBP9.9□□□□□ -0.82
MDC1-203ENST00000417033 DOK7Q18PE1 504 aa9.9□□□□□ -0.82
MDC1-203ENST00000417033 CC2D2BQ6DHV5 1058 aa9.9□□□□□ -0.82
MDC1-203ENST00000417033 FAM84BQ96KN1 310 aaPredicted RBP9.9□□□□□ -0.82
MDC1-203ENST00000417033 RTFDC1Q9BY42 306 aaPredicted RBP9.9□□□□□ -0.82
MDC1-203ENST00000417033 JAG2Q9Y219 1238 aa9.9□□□□□ -0.82
MDC1-203ENST00000417033 AKAP2Q9Y2D5 859 aa9.9□□□□□ -0.82
MDC1-203ENST00000417033 FER1L6Q2WGJ9 1857 aa9.89□□□□□ -0.83
MDC1-203ENST00000417033 MED23Q9ULK4 1368 aa9.89□□□□□ -0.83
MDC1-203ENST00000417033 C19orf67A6NJJ6 358 aa9.89□□□□□ -0.83
MDC1-203ENST00000417033 MX1P20591 662 aa9.89□□□□□ -0.83
MDC1-203ENST00000417033 PDE1AP54750 535 aa9.89□□□□□ -0.83
MDC1-203ENST00000417033 FKBP4Q02790 459 aaKnown RBP eCLIP9.89□□□□□ -0.83
MDC1-203ENST00000417033 CCDC102BQ68D86 513 aa9.89□□□□□ -0.83
MDC1-203ENST00000417033 C15orf52Q6ZUT6 534 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms