RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 DIAPH3Q9NSV4 1193 aa12.34□□□□□ -0.43
DEPDC4-203ENST00000416321 ANKIB1Q9P2G1 1089 aa12.34□□□□□ -0.43
DEPDC4-203ENST00000416321 MINPP1Q9UNW1 487 aa12.34□□□□□ -0.43
DEPDC4-203ENST00000416321 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
DEPDC4-203ENST00000416321 KLRG2A4D1S0 409 aaPredicted RBP12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 H0YIN7 160 aa12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 POLD1P28340 1107 aa12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 ALDH1B1P30837 517 aa12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 ANP32AP39687 249 aaKnown RBP12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 CAVIN4Q5BKX8 364 aa12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 VPS37DQ86XT2 251 aa12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 C2CD5Q86YS7 1000 aa12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 RUFY2Q8WXA3 655 aa12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 MASTLQ96GX5 879 aa12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 GNL3LQ9NVN8 582 aaKnown RBP12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 ANKRD31Q8N7Z5 1873 aa12.33□□□□□ -0.44
DEPDC4-203ENST00000416321 PPEF1O14829 653 aaPredicted RBP12.32□□□□□ -0.44
DEPDC4-203ENST00000416321 REC8O95072 547 aa12.32□□□□□ -0.44
DEPDC4-203ENST00000416321 FGFR2P21802 821 aa12.32□□□□□ -0.44
DEPDC4-203ENST00000416321 PIP4P2Q8N4L2 257 aa12.32□□□□□ -0.44
DEPDC4-203ENST00000416321 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
DEPDC4-203ENST00000416321 ZNF622Q969S3 477 aaKnown RBP eCLIP12.32□□□□□ -0.44
DEPDC4-203ENST00000416321 PAG1Q9NWQ8 432 aa12.32□□□□□ -0.44
DEPDC4-203ENST00000416321 A0A1B0GUL6 1792 aa12.32□□□□□ -0.44
DEPDC4-203ENST00000416321 XDHP47989 1333 aa12.32□□□□□ -0.44
DEPDC4-203ENST00000416321 GOLIM4O00461 696 aa12.31□□□□□ -0.44
DEPDC4-203ENST00000416321 SRGNP10124 158 aa12.31□□□□□ -0.44
DEPDC4-203ENST00000416321 CHMLP26374 656 aa12.31□□□□□ -0.44
DEPDC4-203ENST00000416321 FKBP4Q02790 459 aaKnown RBP eCLIP12.31□□□□□ -0.44
DEPDC4-203ENST00000416321 CCDC102BQ68D86 513 aa12.31□□□□□ -0.44
DEPDC4-203ENST00000416321 ZNF512BQ96KM6 892 aaPredicted RBP12.31□□□□□ -0.44
DEPDC4-203ENST00000416321 LEMD3Q9Y2U8 911 aa12.31□□□□□ -0.44
DEPDC4-203ENST00000416321 COL4A1P02462 1669 aa12.31□□□□□ -0.44
DEPDC4-203ENST00000416321 RFX7Q2KHR2 1363 aa12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 ZBTB7AO95365 584 aa12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 SEC24BO95487 1268 aa12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 PHKA1P46020 1223 aa12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 R3HDM1Q15032 1099 aaKnown RBP12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 TTF1Q15361 905 aaPredicted RBP12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 STYK1Q6J9G0 422 aa12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 KIAA1211Q6ZU35 1233 aa12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 ESYT1Q9BSJ8 1104 aa12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 PDGFDQ9GZP0 370 aaPredicted RBP12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 MTFR1LQ9H019 292 aa12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 ZNF804BA4D1E1 1349 aa12.3□□□□□ -0.44
DEPDC4-203ENST00000416321 FRAT2O75474 233 aaPredicted RBP12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 ATP2B4P23634 1241 aa12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 ARID4AP29374 1257 aaPredicted RBP12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 CWC27Q6UX04 472 aaKnown RBP12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 TICAM2Q86XR7 235 aa12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 KBTBD3Q8NAB2 608 aa12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 CNKSR1Q969H4 720 aa12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 C22orf23Q9BZE7 217 aa12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 SNRKQ9NRH2 765 aa12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 GGA1Q9UJY5 639 aa12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 NSFL1CQ9UNZ2 370 aaKnown RBP12.29□□□□□ -0.44
DEPDC4-203ENST00000416321 COL11A2P13942 1736 aaPredicted RBP12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 SNAP23O00161 211 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 UFL1O94874 794 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 MCCP23508 829 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 BCAMP50895 628 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 ZSCAN25Q6NSZ9 544 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 SP8Q8IXZ3 490 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 SPATA5Q8NB90 893 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 EDC3Q96F86 508 aaKnown RBP12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 ANO2Q9NQ90 1003 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 ATP6V0A2Q9Y487 856 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 NDUFB9Q9Y6M9 179 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 RAD50Q92878 1312 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 C10orf71Q711Q0 1435 aa12.28□□□□□ -0.44
DEPDC4-203ENST00000416321 ZFYP08048 801 aaPredicted RBP12.27□□□□□ -0.45
DEPDC4-203ENST00000416321 HIBADHP31937 336 aaKnown RBP12.27□□□□□ -0.45
DEPDC4-203ENST00000416321 MCAMP43121 646 aa12.27□□□□□ -0.45
DEPDC4-203ENST00000416321 ZAP70P43403 619 aa12.27□□□□□ -0.45
DEPDC4-203ENST00000416321 GYG1P46976 350 aa12.27□□□□□ -0.45
DEPDC4-203ENST00000416321 GPSM2P81274 684 aa12.27□□□□□ -0.45
DEPDC4-203ENST00000416321 ZNF804AQ7Z570 1209 aa12.27□□□□□ -0.45
DEPDC4-203ENST00000416321 DENND2AQ9ULE3 1009 aa12.27□□□□□ -0.45
DEPDC4-203ENST00000416321 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.45
DEPDC4-203ENST00000416321 LRRC37AA6NMS7 1700 aa12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 CACNA1SQ13698 1873 aa12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 C6orf229H3BNL8 230 aa12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 SEMA3EO15041 775 aa12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 CHRNA5P30532 468 aa12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 NMIQ13287 307 aaPredicted RBP12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 RASGRF1Q13972 1273 aa12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 SCARF1Q14162 830 aa12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 TBC1D32Q96NH3 1257 aa12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 HMG20BQ9P0W2 317 aa12.26□□□□□ -0.45
DEPDC4-203ENST00000416321 SGSM2O43147 1006 aa12.25□□□□□ -0.45
DEPDC4-203ENST00000416321 IDH1O75874 414 aaKnown RBP12.25□□□□□ -0.45
DEPDC4-203ENST00000416321 MAP3K12Q12852 859 aa12.25□□□□□ -0.45
DEPDC4-203ENST00000416321 PRPF40BQ6NWY9 871 aaKnown RBP12.25□□□□□ -0.45
DEPDC4-203ENST00000416321 PI16Q6UXB8 463 aa12.25□□□□□ -0.45
DEPDC4-203ENST00000416321 DPP8Q6V1X1 898 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms