RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 A0A1B0GUL6 1792 aa12.18□□□□□ -0.46
DDB1-202ENST00000414411 SNED1Q8TER0 1413 aa12.18□□□□□ -0.46
DDB1-202ENST00000414411 WTIPA6NIX2 430 aaPredicted RBP12.17□□□□□ -0.46
DDB1-202ENST00000414411 SMARCA5O60264 1052 aaPredicted RBP12.17□□□□□ -0.46
DDB1-202ENST00000414411 FGFR2P21802 821 aa12.17□□□□□ -0.46
DDB1-202ENST00000414411 BECN1Q14457 450 aa12.17□□□□□ -0.46
DDB1-202ENST00000414411 LNPKQ9C0E8 428 aa12.17□□□□□ -0.46
DDB1-202ENST00000414411 IL1RAPL2Q9NP60 686 aa12.17□□□□□ -0.46
DDB1-202ENST00000414411 SNAP23O00161 211 aa12.17□□□□□ -0.46
DDB1-202ENST00000414411 GPSM2P81274 684 aa12.17□□□□□ -0.46
DDB1-202ENST00000414411 CC2D2BQ6DHV5 1058 aa12.17□□□□□ -0.46
DDB1-202ENST00000414411 EAF2Q96CJ1 260 aaPredicted RBP12.17□□□□□ -0.46
DDB1-202ENST00000414411 LTBP1Q14766 1721 aa12.17□□□□□ -0.46
DDB1-202ENST00000414411 C21orf2O43822 256 aa12.16□□□□□ -0.46
DDB1-202ENST00000414411 XDHP47989 1333 aa12.16□□□□□ -0.46
DDB1-202ENST00000414411 TIMM10P62072 90 aa12.16□□□□□ -0.46
DDB1-202ENST00000414411 UBE4AQ14139 1066 aa12.16□□□□□ -0.46
DDB1-202ENST00000414411 NFKBIBQ15653 356 aa12.16□□□□□ -0.46
DDB1-202ENST00000414411 TNNI3KQ59H18 835 aa12.16□□□□□ -0.46
DDB1-202ENST00000414411 NSFL1CQ9UNZ2 370 aaKnown RBP12.16□□□□□ -0.46
DDB1-202ENST00000414411 AKAP2Q9Y2D5 859 aa12.16□□□□□ -0.46
DDB1-202ENST00000414411 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
DDB1-202ENST00000414411 FPGT-TNNI3KV9GXZ4 949 aa12.16□□□□□ -0.46
DDB1-202ENST00000414411 PUM3Q15397 648 aaKnown RBP12.15□□□□□ -0.46
DDB1-202ENST00000414411 C16orf71Q8IYS4 520 aaPredicted RBP12.15□□□□□ -0.46
DDB1-202ENST00000414411 CLASRPQ8N2M8 674 aaKnown RBP12.15□□□□□ -0.46
DDB1-202ENST00000414411 ANKIB1Q9P2G1 1089 aa12.15□□□□□ -0.46
DDB1-202ENST00000414411 LEMD3Q9Y2U8 911 aa12.15□□□□□ -0.46
DDB1-202ENST00000414411 IRS2Q9Y4H2 1338 aa12.15□□□□□ -0.46
DDB1-202ENST00000414411 ATP2B3Q16720 1220 aa12.15□□□□□ -0.46
DDB1-202ENST00000414411 GRIPAP1Q4V328 841 aa12.15□□□□□ -0.46
DDB1-202ENST00000414411 MPNDQ8N594 471 aa12.15□□□□□ -0.46
DDB1-202ENST00000414411 TBC1D16Q8TBP0 767 aa12.15□□□□□ -0.46
DDB1-202ENST00000414411 RTFDC1Q9BY42 306 aaPredicted RBP12.15□□□□□ -0.46
DDB1-202ENST00000414411 POLLQ9UGP5 575 aa12.15□□□□□ -0.46
DDB1-202ENST00000414411 WWC3Q9ULE0 1092 aa12.15□□□□□ -0.46
DDB1-202ENST00000414411 ARFGEF1Q9Y6D6 1849 aa12.15□□□□□ -0.46
DDB1-202ENST00000414411 ZNF804BA4D1E1 1349 aa12.14□□□□□ -0.47
DDB1-202ENST00000414411 SALL3Q9BXA9 1300 aa12.14□□□□□ -0.47
DDB1-202ENST00000414411 A0A1B0GUL7 405 aa12.14□□□□□ -0.47
DDB1-202ENST00000414411 SPDYE2BA6NHP3 402 aa12.14□□□□□ -0.47
DDB1-202ENST00000414411 SPDYE6P0CI01 402 aa12.14□□□□□ -0.47
DDB1-202ENST00000414411 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
DDB1-202ENST00000414411 BMP2KLQ5H9B9 411 aa12.14□□□□□ -0.47
DDB1-202ENST00000414411 LPIN2Q92539 896 aa12.14□□□□□ -0.47
DDB1-202ENST00000414411 BCS1LQ9Y276 419 aa12.14□□□□□ -0.47
DDB1-202ENST00000414411 DUOX1Q9NRD9 1551 aa12.14□□□□□ -0.47
DDB1-202ENST00000414411 ZNF609O15014 1411 aa12.14□□□□□ -0.47
DDB1-202ENST00000414411 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
DDB1-202ENST00000414411 MFAP1P55081 439 aaKnown RBP12.13□□□□□ -0.47
DDB1-202ENST00000414411 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
DDB1-202ENST00000414411 DPP8Q6V1X1 898 aaPredicted RBP12.13□□□□□ -0.47
DDB1-202ENST00000414411 C15orf52Q6ZUT6 534 aaKnown RBP12.13□□□□□ -0.47
DDB1-202ENST00000414411 AACSQ86V21 672 aa12.13□□□□□ -0.47
DDB1-202ENST00000414411 RTKN2Q8IZC4 609 aa12.13□□□□□ -0.47
DDB1-202ENST00000414411 C22orf23Q9BZE7 217 aa12.13□□□□□ -0.47
DDB1-202ENST00000414411 CCDC8Q9H0W5 538 aaPredicted RBP12.13□□□□□ -0.47
DDB1-202ENST00000414411 TMX4Q9H1E5 349 aaPredicted RBP12.13□□□□□ -0.47
DDB1-202ENST00000414411 DBNLQ9UJU6 430 aaKnown RBP12.13□□□□□ -0.47
DDB1-202ENST00000414411 GGA1Q9UJY5 639 aa12.13□□□□□ -0.47
DDB1-202ENST00000414411 CCDC93Q567U6 631 aa12.13□□□□□ -0.47
DDB1-202ENST00000414411 OTUD7AQ8TE49 926 aaPredicted RBP12.13□□□□□ -0.47
DDB1-202ENST00000414411 XAGE2Q96GT9 111 aa12.13□□□□□ -0.47
DDB1-202ENST00000414411 PSMD1Q99460 953 aa12.13□□□□□ -0.47
DDB1-202ENST00000414411 TLR7Q9NYK1 1049 aaKnown RBP12.13□□□□□ -0.47
DDB1-202ENST00000414411 FER1L6Q2WGJ9 1857 aa12.12□□□□□ -0.47
DDB1-202ENST00000414411 UFL1O94874 794 aa12.12□□□□□ -0.47
DDB1-202ENST00000414411 ADORA1P30542 326 aa12.12□□□□□ -0.47
DDB1-202ENST00000414411 TXNRD3Q86VQ6 643 aa12.12□□□□□ -0.47
DDB1-202ENST00000414411 NEUROD6Q96NK8 337 aa12.12□□□□□ -0.47
DDB1-202ENST00000414411 DBNDD2Q9BQY9 259 aa12.12□□□□□ -0.47
DDB1-202ENST00000414411 TBC1D2Q9BYX2 928 aa12.12□□□□□ -0.47
DDB1-202ENST00000414411 IFIT2P09913 472 aaKnown RBP12.11□□□□□ -0.47
DDB1-202ENST00000414411 IFIT1P09914 478 aaKnown RBP12.11□□□□□ -0.47
DDB1-202ENST00000414411 SLC5A1P13866 664 aa12.11□□□□□ -0.47
DDB1-202ENST00000414411 KLRK1P26718 216 aa12.11□□□□□ -0.47
DDB1-202ENST00000414411 PLEKHM2Q8IWE5 1019 aa12.11□□□□□ -0.47
DDB1-202ENST00000414411 FAM84BQ96KN1 310 aaPredicted RBP12.11□□□□□ -0.47
DDB1-202ENST00000414411 STAP2Q9UGK3 403 aa12.11□□□□□ -0.47
DDB1-202ENST00000414411 ARAP2Q8WZ64 1704 aa12.11□□□□□ -0.47
DDB1-202ENST00000414411 C6orf229H3BNL8 230 aa12.11□□□□□ -0.47
DDB1-202ENST00000414411 KCNJ4P48050 445 aa12.11□□□□□ -0.47
DDB1-202ENST00000414411 FBXO33Q7Z6M2 555 aa12.11□□□□□ -0.47
DDB1-202ENST00000414411 YBX3P16989 372 aaKnown RBP eCLIP12.1□□□□□ -0.478e-12■□□□□ 9.5
DDB1-202ENST00000414411 FKBP4Q02790 459 aaKnown RBP eCLIP12.1□□□□□ -0.47
DDB1-202ENST00000414411 GPR101Q96P66 508 aaPredicted RBP12.1□□□□□ -0.47
DDB1-202ENST00000414411 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
DDB1-202ENST00000414411 OSBPL3Q9H4L5 887 aa12.1□□□□□ -0.47
DDB1-202ENST00000414411 MED23Q9ULK4 1368 aa12.1□□□□□ -0.47
DDB1-202ENST00000414411 NFKBIEO00221 500 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 MX1P20591 662 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 GYG1P46976 350 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 BCAMP50895 628 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 PDE1AP54750 535 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 WASHC4Q2M389 1173 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 CCDC102BQ68D86 513 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 SUPT20HQ8NEM7 779 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 ZNF512BQ96KM6 892 aaPredicted RBP12.09□□□□□ -0.47
DDB1-202ENST00000414411 VPS33BQ9H267 617 aa12.09□□□□□ -0.47
DDB1-202ENST00000414411 ANTXR1Q9H6X2 564 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms