RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 GPRC5DQ9NZD1 345 aa18.31■□□□□ 0.52
CHD1-202ENST00000414220 SRGAP3O43295 1099 aa18.3■□□□□ 0.52
CHD1-202ENST00000414220 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
CHD1-202ENST00000414220 VPS37DQ86XT2 251 aa18.3■□□□□ 0.52
CHD1-202ENST00000414220 FBXW7Q969H0 707 aa18.3■□□□□ 0.52
CHD1-202ENST00000414220 CNOT7Q9UIV1 285 aaKnown RBP18.3■□□□□ 0.52
CHD1-202ENST00000414220 SCN4AP35499 1836 aa18.29■□□□□ 0.52
CHD1-202ENST00000414220 CIAO1O76071 339 aa18.29■□□□□ 0.52
CHD1-202ENST00000414220 PDE8BO95263 885 aa18.29■□□□□ 0.52
CHD1-202ENST00000414220 EPS15P42566 896 aa18.29■□□□□ 0.52
CHD1-202ENST00000414220 PTPN12Q05209 780 aaKnown RBP18.29■□□□□ 0.52
CHD1-202ENST00000414220 LRRC24Q50LG9 513 aa18.29■□□□□ 0.52
CHD1-202ENST00000414220 CAVIN4Q5BKX8 364 aa18.29■□□□□ 0.52
CHD1-202ENST00000414220 AGBL3Q8NEM8 1001 aa18.29■□□□□ 0.52
CHD1-202ENST00000414220 KLHDC4Q8TBB5 520 aa18.29■□□□□ 0.52
CHD1-202ENST00000414220 LTBP1Q14766 1721 aa18.29■□□□□ 0.52
CHD1-202ENST00000414220 MYO3BQ8WXR4 1341 aa18.28■□□□□ 0.52
CHD1-202ENST00000414220 IFIT1P09914 478 aaKnown RBP18.28■□□□□ 0.52
CHD1-202ENST00000414220 HSPA6P17066 643 aa18.28■□□□□ 0.52
CHD1-202ENST00000414220 IL15P40933 162 aaPredicted RBP18.28■□□□□ 0.52
CHD1-202ENST00000414220 RFX5P48382 616 aaPredicted RBP18.28■□□□□ 0.52
CHD1-202ENST00000414220 MMP14P50281 582 aa18.28■□□□□ 0.52
CHD1-202ENST00000414220 MTX1Q13505 466 aa18.28■□□□□ 0.52
CHD1-202ENST00000414220 STRIP1Q5VSL9 837 aa18.28■□□□□ 0.52
CHD1-202ENST00000414220 TTLL5Q6EMB2 1281 aa18.28■□□□□ 0.52
CHD1-202ENST00000414220 RSBN1LQ6PCB5 846 aaPredicted RBP18.28■□□□□ 0.52
CHD1-202ENST00000414220 CD209Q9NNX6 404 aa18.28■□□□□ 0.52
CHD1-202ENST00000414220 COPRSQ9NQ92 184 aa18.28■□□□□ 0.52
CHD1-202ENST00000414220 CEP126Q9P2H0 1117 aa18.28■□□□□ 0.52
CHD1-202ENST00000414220 DDX19BQ9UMR2 479 aa18.28■□□□□ 0.52
CHD1-202ENST00000414220 ZBTB12Q9Y330 459 aaPredicted RBP18.28■□□□□ 0.52
CHD1-202ENST00000414220 ZBTB7BO15156 539 aaPredicted RBP18.27■□□□□ 0.52
CHD1-202ENST00000414220 HIBADHP31937 336 aaKnown RBP18.27■□□□□ 0.52
CHD1-202ENST00000414220 PUM3Q15397 648 aaKnown RBP18.27■□□□□ 0.52
CHD1-202ENST00000414220 OGFOD1Q8N543 542 aa18.27■□□□□ 0.52
CHD1-202ENST00000414220 SIL1Q9H173 461 aa18.27■□□□□ 0.52
CHD1-202ENST00000414220 KCNQ5Q9NR82 932 aa18.27■□□□□ 0.52
CHD1-202ENST00000414220 SPEF2Q9C093 1822 aa18.27■□□□□ 0.52
CHD1-202ENST00000414220 WTIPA6NIX2 430 aaPredicted RBP18.26■□□□□ 0.51
CHD1-202ENST00000414220 RLBP1P12271 317 aa18.26■□□□□ 0.51
CHD1-202ENST00000414220 TXNRD3Q86VQ6 643 aa18.26■□□□□ 0.51
CHD1-202ENST00000414220 MICALL2Q8IY33 904 aa18.26■□□□□ 0.51
CHD1-202ENST00000414220 PANK1Q8TE04 598 aa18.26■□□□□ 0.51
CHD1-202ENST00000414220 SNAP23O00161 211 aa18.25■□□□□ 0.51
CHD1-202ENST00000414220 FRAT2O75474 233 aaPredicted RBP18.25■□□□□ 0.51
CHD1-202ENST00000414220 SLC5A1P13866 664 aa18.25■□□□□ 0.51
CHD1-202ENST00000414220 APLP1P51693 650 aa18.25■□□□□ 0.51
CHD1-202ENST00000414220 GTF2IP78347 998 aa18.25■□□□□ 0.51
CHD1-202ENST00000414220 G3BP1Q13283 466 aaKnown RBP eCLIP18.25■□□□□ 0.51
CHD1-202ENST00000414220 PDE3AQ14432 1141 aa18.25■□□□□ 0.51
CHD1-202ENST00000414220 ZC3H15Q8WU90 426 aaKnown RBP18.25■□□□□ 0.51
CHD1-202ENST00000414220 LPIN2Q92539 896 aa18.25■□□□□ 0.51
CHD1-202ENST00000414220 HDAC9Q9UKV0 1011 aa18.25■□□□□ 0.51
CHD1-202ENST00000414220 USP17L8P0C7I0 530 aa18.24■□□□□ 0.51
CHD1-202ENST00000414220 IL1R1P14778 569 aa18.24■□□□□ 0.51
CHD1-202ENST00000414220 KLRK1P26718 216 aa18.24■□□□□ 0.51
CHD1-202ENST00000414220 MVPQ14764 893 aaKnown RBP18.24■□□□□ 0.51
CHD1-202ENST00000414220 AKAP2Q9Y2D5 859 aa18.24■□□□□ 0.51
CHD1-202ENST00000414220 ATP8B2P98198 1209 aa18.23■□□□□ 0.51
CHD1-202ENST00000414220 SASH1O94885 1247 aa18.22■□□□□ 0.51
CHD1-202ENST00000414220 POTEIP0CG38 1075 aa18.22■□□□□ 0.51
CHD1-202ENST00000414220 POTEJP0CG39 1038 aa18.22■□□□□ 0.51
CHD1-202ENST00000414220 GYG1P46976 350 aa18.22■□□□□ 0.51
CHD1-202ENST00000414220 OS9Q13438 667 aaPredicted RBP18.22■□□□□ 0.51
CHD1-202ENST00000414220 DACT2Q5SW24 774 aa18.22■□□□□ 0.51
CHD1-202ENST00000414220 RBM26Q5T8P6 1007 aaKnown RBP18.22■□□□□ 0.51
CHD1-202ENST00000414220 ATG9AQ7Z3C6 839 aa18.22■□□□□ 0.51
CHD1-202ENST00000414220 CNTROBQ8N137 903 aa18.22■□□□□ 0.51
CHD1-202ENST00000414220 VGLL2Q8N8G2 317 aa18.22■□□□□ 0.51
CHD1-202ENST00000414220 FAM84BQ96KN1 310 aaPredicted RBP18.22■□□□□ 0.51
CHD1-202ENST00000414220 GNL3LQ9NVN8 582 aaKnown RBP18.22■□□□□ 0.51
CHD1-202ENST00000414220 PA2G4Q9UQ80 394 aaKnown RBP18.22■□□□□ 0.51
CHD1-202ENST00000414220 COG6Q9Y2V7 657 aa18.22■□□□□ 0.51
CHD1-202ENST00000414220 FKBP1AP62942 108 aaKnown RBP18.21■□□□□ 0.51
CHD1-202ENST00000414220 ATP2B3Q16720 1220 aa18.21■□□□□ 0.51
CHD1-202ENST00000414220 MAP1SQ66K74 1059 aaPredicted RBP18.21■□□□□ 0.51
CHD1-202ENST00000414220 IRS2Q9Y4H2 1338 aa18.21■□□□□ 0.51
CHD1-202ENST00000414220 KIF4BQ2VIQ3 1234 aa18.2■□□□□ 0.5
CHD1-202ENST00000414220 TBC1D10BQ4KMP7 808 aaPredicted RBP18.2■□□□□ 0.5
CHD1-202ENST00000414220 SAMD7Q7Z3H4 446 aa18.2■□□□□ 0.5
CHD1-202ENST00000414220 FBXO33Q7Z6M2 555 aa18.2■□□□□ 0.5
CHD1-202ENST00000414220 TDRD7Q8NHU6 1098 aaKnown RBP18.2■□□□□ 0.5
CHD1-202ENST00000414220 C1orf115Q9H7X2 142 aa18.2■□□□□ 0.5
CHD1-202ENST00000414220 ZNF609O15014 1411 aa18.2■□□□□ 0.5
CHD1-202ENST00000414220 PNMA6EA0A0J9YXQ4 647 aa18.19■□□□□ 0.5
CHD1-202ENST00000414220 HMMRO75330 724 aa18.19■□□□□ 0.5
CHD1-202ENST00000414220 FGFR2P21802 821 aa18.19■□□□□ 0.5
CHD1-202ENST00000414220 ZNF280AP59817 542 aaPredicted RBP18.19■□□□□ 0.5
CHD1-202ENST00000414220 SSH3Q8TE77 659 aa18.19■□□□□ 0.5
CHD1-202ENST00000414220 TBC1D22AQ8WUA7 517 aa18.19■□□□□ 0.5
CHD1-202ENST00000414220 DCPSQ96C86 337 aaKnown RBP18.19■□□□□ 0.5
CHD1-202ENST00000414220 GMLQ99445 158 aa18.19■□□□□ 0.5
CHD1-202ENST00000414220 MYOZ2Q9NPC6 264 aa18.19■□□□□ 0.5
CHD1-202ENST00000414220 SURF6O75683 361 aaKnown RBP18.18■□□□□ 0.5
CHD1-202ENST00000414220 POLA2Q14181 598 aa18.18■□□□□ 0.5
CHD1-202ENST00000414220 CDC37L1Q7L3B6 337 aa18.18■□□□□ 0.5
CHD1-202ENST00000414220 RPAP2Q8IXW5 612 aaPredicted RBP18.18■□□□□ 0.5
CHD1-202ENST00000414220 PGAP2Q9UHJ9 254 aa18.18■□□□□ 0.5
CHD1-202ENST00000414220 BCAMP50895 628 aa18.17■□□□□ 0.5
CHD1-202ENST00000414220 HSP90AB4PQ58FF6 505 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms