RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 ZBTB3Q9H5J0 574 aa21.16■□□□□ 0.98
PTPRC-206ENST00000413409 F6X3S4 739 aa21.15■□□□□ 0.98
PTPRC-206ENST00000413409 PSMD14O00487 310 aa21.15■□□□□ 0.98
PTPRC-206ENST00000413409 HMMRO75330 724 aa21.15■□□□□ 0.98
PTPRC-206ENST00000413409 TBC1D8O95759 1140 aa21.15■□□□□ 0.98
PTPRC-206ENST00000413409 GNAI3P08754 354 aa21.15■□□□□ 0.98
PTPRC-206ENST00000413409 RBM26Q5T8P6 1007 aaKnown RBP21.15■□□□□ 0.98
PTPRC-206ENST00000413409 NLRP3Q96P20 1036 aa21.15■□□□□ 0.98
PTPRC-206ENST00000413409 HDAC9Q9UKV0 1011 aa21.15■□□□□ 0.98
PTPRC-206ENST00000413409 SLC10A5Q5PT55 438 aa21.14■□□□□ 0.97
PTPRC-206ENST00000413409 DCPSQ96C86 337 aaKnown RBP21.14■□□□□ 0.97
PTPRC-206ENST00000413409 HTTP42858 3142 aa21.13■□□□□ 0.97
PTPRC-206ENST00000413409 BBOX1O75936 387 aa21.13■□□□□ 0.97
PTPRC-206ENST00000413409 BMP2KLQ5H9B9 411 aa21.13■□□□□ 0.97
PTPRC-206ENST00000413409 ANKRD45Q5TZF3 282 aa21.13■□□□□ 0.97
PTPRC-206ENST00000413409 SLC4A10Q6U841 1118 aa21.13■□□□□ 0.97
PTPRC-206ENST00000413409 UPF2Q9HAU5 1272 aaKnown RBP21.13■□□□□ 0.97
PTPRC-206ENST00000413409 ASTN2O75129 1339 aaPredicted RBP21.13■□□□□ 0.97
PTPRC-206ENST00000413409 GNAI2P04899 355 aa21.12■□□□□ 0.97
PTPRC-206ENST00000413409 KIF6Q6ZMV9 814 aa21.12■□□□□ 0.97
PTPRC-206ENST00000413409 REM2Q8IYK8 340 aaPredicted RBP21.12■□□□□ 0.97
PTPRC-206ENST00000413409 KCNQ5Q9NR82 932 aa21.12■□□□□ 0.97
PTPRC-206ENST00000413409 DUOX1Q9NRD9 1551 aa21.12■□□□□ 0.97
PTPRC-206ENST00000413409 FBXO46Q6PJ61 603 aaPredicted RBP21.11■□□□□ 0.97
PTPRC-206ENST00000413409 NECTIN2Q92692 538 aa21.11■□□□□ 0.97
PTPRC-206ENST00000413409 CDCA5Q96FF9 252 aa21.11■□□□□ 0.97
PTPRC-206ENST00000413409 LAMB4A4D0S4 1761 aa21.1■□□□□ 0.97
PTPRC-206ENST00000413409 MYL6BP14649 208 aa21.1■□□□□ 0.97
PTPRC-206ENST00000413409 CHPF2Q9P2E5 772 aa21.1■□□□□ 0.97
PTPRC-206ENST00000413409 DBF4Q9UBU7 674 aaPredicted RBP21.1■□□□□ 0.97
PTPRC-206ENST00000413409 GIGYF2Q6Y7W6 1299 aaKnown RBP21.09■□□□□ 0.97
PTPRC-206ENST00000413409 PPP1R42Q7Z4L9 355 aa21.09■□□□□ 0.97
PTPRC-206ENST00000413409 DBNDD1Q9H9R9 158 aa21.09■□□□□ 0.97
PTPRC-206ENST00000413409 SZT2Q5T011 3432 aa21.09■□□□□ 0.97
PTPRC-206ENST00000413409 GPR25O00155 361 aa21.08■□□□□ 0.97
PTPRC-206ENST00000413409 GGA3Q9NZ52 723 aa21.08■□□□□ 0.97
PTPRC-206ENST00000413409 RTL9Q8NET4 1388 aa21.08■□□□□ 0.96
PTPRC-206ENST00000413409 SEC24BO95487 1268 aa21.07■□□□□ 0.96
PTPRC-206ENST00000413409 EIF2S2P20042 333 aaKnown RBP21.07■□□□□ 0.96
PTPRC-206ENST00000413409 MOB2Q70IA6 237 aa21.07■□□□□ 0.96
PTPRC-206ENST00000413409 SULF1Q8IWU6 871 aa21.07■□□□□ 0.96
PTPRC-206ENST00000413409 TBC1D32Q96NH3 1257 aa21.07■□□□□ 0.96
PTPRC-206ENST00000413409 UTP14AQ9BVJ6 771 aaKnown RBP21.07■□□□□ 0.96
PTPRC-206ENST00000413409 CENPFP49454 3210 aa21.06■□□□□ 0.96
PTPRC-206ENST00000413409 POTEFA5A3E0 1075 aa21.06■□□□□ 0.96
PTPRC-206ENST00000413409 HCLS1P14317 486 aaPredicted RBP21.06■□□□□ 0.96
PTPRC-206ENST00000413409 KIF4BQ2VIQ3 1234 aa21.06■□□□□ 0.96
PTPRC-206ENST00000413409 PARP10Q53GL7 1025 aa21.06■□□□□ 0.96
PTPRC-206ENST00000413409 SRCIN1Q9C0H9 1055 aa21.06■□□□□ 0.96
PTPRC-206ENST00000413409 R3HDMLQ9H3Y0 253 aa21.06■□□□□ 0.96
PTPRC-206ENST00000413409 PHAXQ9H814 394 aaKnown RBP21.06■□□□□ 0.96
PTPRC-206ENST00000413409 TAF1P21675 1872 aa21.06■□□□□ 0.96
PTPRC-206ENST00000413409 RPS12P25398 132 aaKnown RBP21.05■□□□□ 0.96
PTPRC-206ENST00000413409 DNAAF4Q8WXU2 420 aa21.05■□□□□ 0.96
PTPRC-206ENST00000413409 LAMB2P55268 1798 aa21.05■□□□□ 0.96
PTPRC-206ENST00000413409 RIMBP2O15034 1052 aa21.04■□□□□ 0.96
PTPRC-206ENST00000413409 GRAPQ13588 217 aa21.04■□□□□ 0.96
PTPRC-206ENST00000413409 WASHC4Q2M389 1173 aa21.04■□□□□ 0.96
PTPRC-206ENST00000413409 NOM1Q5C9Z4 860 aaKnown RBP21.04■□□□□ 0.96
PTPRC-206ENST00000413409 GRAPLQ8TC17 118 aaPredicted RBP21.04■□□□□ 0.96
PTPRC-206ENST00000413409 HYPKQ9NX55 129 aa21.04■□□□□ 0.96
PTPRC-206ENST00000413409 BRCA2P51587 3418 aa21.04■□□□□ 0.96
PTPRC-206ENST00000413409 EIF5BO60841 1220 aaKnown RBP21.04■□□□□ 0.96
PTPRC-206ENST00000413409 TM4SF4P48230 202 aa21.04■□□□□ 0.96
PTPRC-206ENST00000413409 UBTFL1P0CB47 393 aaPredicted RBP21.03■□□□□ 0.96
PTPRC-206ENST00000413409 ATP8B2P98198 1209 aa21.03■□□□□ 0.96
PTPRC-206ENST00000413409 DOK7Q18PE1 504 aa21.03■□□□□ 0.96
PTPRC-206ENST00000413409 BEND3Q5T5X7 828 aa21.03■□□□□ 0.96
PTPRC-206ENST00000413409 DDX46Q7L014 1031 aaKnown RBP21.03■□□□□ 0.96
PTPRC-206ENST00000413409 UBE2Q2LH0YL09 131 aa21.02■□□□□ 0.95
PTPRC-206ENST00000413409 ECE2O60344 883 aa21.02■□□□□ 0.95
PTPRC-206ENST00000413409 ALDH1L1O75891 902 aa21.02■□□□□ 0.95
PTPRC-206ENST00000413409 FKBP1BP68106 108 aa21.02■□□□□ 0.95
PTPRC-206ENST00000413409 ANGEL2Q5VTE6 544 aaKnown RBP21.02■□□□□ 0.95
PTPRC-206ENST00000413409 LRP10Q7Z4F1 713 aa21.02■□□□□ 0.95
PTPRC-206ENST00000413409 PLEKHM2Q8IWE5 1019 aa21.02■□□□□ 0.95
PTPRC-206ENST00000413409 USP44Q9H0E7 712 aa21.02■□□□□ 0.95
PTPRC-206ENST00000413409 POLLQ9UGP5 575 aa21.02■□□□□ 0.95
PTPRC-206ENST00000413409 ANKRD36CQ5JPF3 1778 aa21.01■□□□□ 0.95
PTPRC-206ENST00000413409 FKTNO75072 461 aa21.01■□□□□ 0.95
PTPRC-206ENST00000413409 SCARF1Q14162 830 aa21.01■□□□□ 0.95
PTPRC-206ENST00000413409 SCAF8Q9UPN6 1271 aaKnown RBP21.01■□□□□ 0.95
PTPRC-206ENST00000413409 COLQQ9Y215 455 aaPredicted RBP21.01■□□□□ 0.95
PTPRC-206ENST00000413409 KIAA0100Q14667 2235 aaKnown RBP21■□□□□ 0.95
PTPRC-206ENST00000413409 PI4KAP2A4QPH2 592 aa21■□□□□ 0.95
PTPRC-206ENST00000413409 VIL1P09327 827 aaKnown RBP21■□□□□ 0.95
PTPRC-206ENST00000413409 PI4KAP1Q8N8J0 262 aa21■□□□□ 0.95
PTPRC-206ENST00000413409 LRRFIP2Q9Y608 721 aaKnown RBP21■□□□□ 0.95
PTPRC-206ENST00000413409 LRRC37AA6NMS7 1700 aa21■□□□□ 0.95
PTPRC-206ENST00000413409 TRIOBPQ9H2D6 2365 aa20.99■□□□□ 0.95
PTPRC-206ENST00000413409 PAPPA2Q9BXP8 1791 aa20.99■□□□□ 0.95
PTPRC-206ENST00000413409 DDX58O95786 925 aaKnown RBP20.99■□□□□ 0.95
PTPRC-206ENST00000413409 TTC22Q5TAA0 569 aa20.99■□□□□ 0.95
PTPRC-206ENST00000413409 KSR2Q6VAB6 950 aa20.99■□□□□ 0.95
PTPRC-206ENST00000413409 DAXXQ9UER7 740 aaPredicted RBP20.99■□□□□ 0.95
PTPRC-206ENST00000413409 NSFL1CQ9UNZ2 370 aaKnown RBP20.99■□□□□ 0.95
PTPRC-206ENST00000413409 A0A0C4DFX4 3053 aa20.98■□□□□ 0.95
PTPRC-206ENST00000413409 SCN9AQ15858 1988 aa20.98■□□□□ 0.95
PTPRC-206ENST00000413409 GPSM2P81274 684 aa20.98■□□□□ 0.95
PTPRC-206ENST00000413409 MKRN3Q13064 507 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms