RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SMUG1Q53HV7 270 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 RMDN2Q96LZ7 410 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 SCLT1Q96NL6 688 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 MKRN1Q9UHC7 482 aaKnown RBP6.03□□□□□ -1.44
HERC4-205ENST00000412272 ATP8A1Q9Y2Q0 1164 aa6.03□□□□□ -1.44
HERC4-205ENST00000412272 U3KPZ7 1027 aaPredicted RBP6.03□□□□□ -1.44
HERC4-205ENST00000412272 CYP27B1O15528 508 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 CREB3O43889 395 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 HARSP12081 509 aaKnown RBP6.02□□□□□ -1.45
HERC4-205ENST00000412272 TMED1Q13445 227 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 MCTP1Q6DN14 999 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 USP33Q8TEY7 942 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 SAAL1Q96ER3 474 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 DNAAF2Q9NVR5 837 aaKnown RBP6.02□□□□□ -1.45
HERC4-205ENST00000412272 HOXC10Q9NYD6 342 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 POLR3AO14802 1390 aaPredicted RBP6.02□□□□□ -1.45
HERC4-205ENST00000412272 CD2BP2O95400 341 aaKnown RBP6.02□□□□□ -1.45
HERC4-205ENST00000412272 SLC4A2P04920 1241 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 RC3H1Q5TC82 1133 aaKnown RBP6.02□□□□□ -1.45
HERC4-205ENST00000412272 CLASRPQ8N2M8 674 aaKnown RBP6.02□□□□□ -1.45
HERC4-205ENST00000412272 FUCA2Q9BTY2 467 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 PARD6BQ9BYG5 372 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 HDAC6Q9UBN7 1215 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 ZNF510Q9Y2H8 683 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 A0A1B0GUA9 196 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 ENO4A6NNW6 628 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 ADCY5O95622 1261 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 KCNB1Q14721 858 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 POSTNQ15063 836 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 THEMIS2Q5TEJ8 643 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 IQCA1Q86XH1 822 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 CCDC102AQ96A19 550 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 CLIP3Q96DZ5 547 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 ZDHHC9Q9Y397 364 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 KAT6BQ8WYB5 2073 aa6.02□□□□□ -1.45
HERC4-205ENST00000412272 SH3BP5O60239 455 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 RARSP54136 660 aaKnown RBP6.01□□□□□ -1.45
HERC4-205ENST00000412272 ADCY1Q08828 1119 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 MVPQ14764 893 aaKnown RBP6.01□□□□□ -1.45
HERC4-205ENST00000412272 ZNF662Q6ZS27 426 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 SLC7A5P2Q9GIP4 190 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 KDM5AP29375 1690 aaKnown RBP6.01□□□□□ -1.45
HERC4-205ENST00000412272 ST20-MTHFSA0A0A6YYL1 179 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 ZEB2O60315 1214 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 FESP07332 822 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 PPP2R1AP30153 589 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 PPP4CP60510 307 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 NUCB1Q02818 461 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 CCDC80Q76M96 950 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 ARHGAP22Q7Z5H3 698 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.01□□□□□ -1.45
HERC4-205ENST00000412272 SDCCAG8Q86SQ7 713 aaPredicted RBP6.01□□□□□ -1.45
HERC4-205ENST00000412272 MAB21L3Q8N8X9 362 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 ANKK1Q8NFD2 765 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 PCDHGC5Q9Y5F6 944 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.01□□□□□ -1.45
HERC4-205ENST00000412272 M0R2C6 588 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 CBFA2T2O43439 604 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 SASH3O75995 380 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 CWF19L1Q69YN2 538 aaKnown RBP6.01□□□□□ -1.45
HERC4-205ENST00000412272 RCSD1Q6JBY9 416 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 CATIPQ7Z7H3 387 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 SLC43A3Q8NBI5 491 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 BHMTQ93088 406 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 C16orf45Q96MC5 204 aaPredicted RBP6.01□□□□□ -1.45
HERC4-205ENST00000412272 TESK2Q96S53 571 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 CARD11Q9BXL7 1154 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 CD248Q9HCU0 757 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 SPO11Q9Y5K1 396 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 ELP1O95163 1332 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 UNC13BO14795 1591 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 IQGAP2Q13576 1575 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 NEURL4Q96JN8 1562 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 BBOX1O75936 387 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 BTG3Q14201 252 aaPredicted RBP6.01□□□□□ -1.45
HERC4-205ENST00000412272 CLPPQ16740 277 aaPredicted RBP6.01□□□□□ -1.45
HERC4-205ENST00000412272 TTLL7Q6ZT98 887 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 MFN1Q8IWA4 741 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 MYO1HQ8N1T3 1032 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 SPIRE2Q8WWL2 714 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 XAGE2Q96GT9 111 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 CORO1BQ9BR76 489 aa6.01□□□□□ -1.45
HERC4-205ENST00000412272 CDK13Q14004 1512 aaKnown RBP6□□□□□ -1.45
HERC4-205ENST00000412272 TMEM221A6NGB7 291 aa6□□□□□ -1.45
HERC4-205ENST00000412272 CHUKO15111 745 aa6□□□□□ -1.45
HERC4-205ENST00000412272 AHCYL1O43865 530 aa6□□□□□ -1.45
HERC4-205ENST00000412272 TUBB4AP04350 444 aa6□□□□□ -1.45
HERC4-205ENST00000412272 PDE6BP35913 854 aa6□□□□□ -1.45
HERC4-205ENST00000412272 CDR1P51861 262 aa6□□□□□ -1.45
HERC4-205ENST00000412272 CLNS1AP54105 237 aaKnown RBP6□□□□□ -1.45
HERC4-205ENST00000412272 SLC8A3P57103 927 aa6□□□□□ -1.45
HERC4-205ENST00000412272 ARHGEF5Q12774 1597 aa6□□□□□ -1.45
HERC4-205ENST00000412272 PABPC4Q13310 644 aaKnown RBP eCLIP6□□□□□ -1.45
HERC4-205ENST00000412272 VPS53Q5VIR6 699 aa6□□□□□ -1.45
HERC4-205ENST00000412272 TMC6Q7Z403 805 aa6□□□□□ -1.45
HERC4-205ENST00000412272 ARHGAP45Q92619 1136 aa6□□□□□ -1.45
HERC4-205ENST00000412272 RRP7BPQ9NSQ0 103 aa6□□□□□ -1.45
HERC4-205ENST00000412272 PDS5BQ9NTI5 1447 aa6□□□□□ -1.45
HERC4-205ENST00000412272 FBXO9Q9UK97 447 aaPredicted RBP6□□□□□ -1.45
HERC4-205ENST00000412272 MYO3AQ8NEV4 1616 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms