RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 UBE4AQ14139 1066 aa29.66■■■□□ 2.34
UBE2E3-202ENST00000410062 L3MBTL3Q96JM7 780 aaPredicted RBP29.66■■■□□ 2.34
UBE2E3-202ENST00000410062 VEGFAP15692 232 aaPredicted RBP29.65■■■□□ 2.34
UBE2E3-202ENST00000410062 TNIP1Q15025 636 aa29.64■■■□□ 2.34
UBE2E3-202ENST00000410062 CEP85Q6P2H3 762 aa29.64■■■□□ 2.34
UBE2E3-202ENST00000410062 PSMD14O00487 310 aa29.64■■■□□ 2.33
UBE2E3-202ENST00000410062 POLA2Q14181 598 aa29.64■■■□□ 2.33
UBE2E3-202ENST00000410062 C15orf52Q6ZUT6 534 aaKnown RBP29.64■■■□□ 2.33
UBE2E3-202ENST00000410062 COA1Q9GZY4 146 aa29.64■■■□□ 2.33
UBE2E3-202ENST00000410062 IL15P40933 162 aaPredicted RBP29.63■■■□□ 2.33
UBE2E3-202ENST00000410062 PODNQ7Z5L7 613 aa29.63■■■□□ 2.33
UBE2E3-202ENST00000410062 SSH3Q8TE77 659 aa29.63■■■□□ 2.33
UBE2E3-202ENST00000410062 CHMP4BQ9H444 224 aaKnown RBP29.63■■■□□ 2.33
UBE2E3-202ENST00000410062 CEP126Q9P2H0 1117 aa29.61■■■□□ 2.33
UBE2E3-202ENST00000410062 GMPSP49915 693 aaPredicted RBP29.6■■■□□ 2.33
UBE2E3-202ENST00000410062 SCNN1DP51172 638 aa29.6■■■□□ 2.33
UBE2E3-202ENST00000410062 PUM3Q15397 648 aaKnown RBP29.6■■■□□ 2.33
UBE2E3-202ENST00000410062 CD209Q9NNX6 404 aa29.6■■■□□ 2.33
UBE2E3-202ENST00000410062 ZBTB12Q9Y330 459 aaPredicted RBP29.6■■■□□ 2.33
UBE2E3-202ENST00000410062 SCN4AP35499 1836 aa29.6■■■□□ 2.33
UBE2E3-202ENST00000410062 IQCA1LA6NCM1 817 aa29.6■■■□□ 2.33
UBE2E3-202ENST00000410062 GYG1P46976 350 aa29.6■■■□□ 2.33
UBE2E3-202ENST00000410062 ZNF804AQ7Z570 1209 aa29.6■■■□□ 2.33
UBE2E3-202ENST00000410062 FGFR2P21802 821 aa29.59■■■□□ 2.33
UBE2E3-202ENST00000410062 HACL1Q9UJ83 578 aa29.59■■■□□ 2.33
UBE2E3-202ENST00000410062 C16orf71Q8IYS4 520 aaPredicted RBP29.58■■■□□ 2.33
UBE2E3-202ENST00000410062 PSME4Q14997 1843 aa29.58■■■□□ 2.33
UBE2E3-202ENST00000410062 VIL1P09327 827 aaKnown RBP29.57■■■□□ 2.32
UBE2E3-202ENST00000410062 G3BP1Q13283 466 aaKnown RBP eCLIP29.57■■■□□ 2.32
UBE2E3-202ENST00000410062 FBXW7Q969H0 707 aa29.57■■■□□ 2.32
UBE2E3-202ENST00000410062 FAM84BQ96KN1 310 aaPredicted RBP29.57■■■□□ 2.32
UBE2E3-202ENST00000410062 TAF1DQ9H5J8 278 aaPredicted RBP29.57■■■□□ 2.32
UBE2E3-202ENST00000410062 USP17L3A6NCW0 530 aa29.56■■■□□ 2.32
UBE2E3-202ENST00000410062 USP17L4A6NCW7 530 aa29.56■■■□□ 2.32
UBE2E3-202ENST00000410062 LMOD1P29536 600 aaPredicted RBP29.56■■■□□ 2.32
UBE2E3-202ENST00000410062 EPS15P42566 896 aa29.56■■■□□ 2.32
UBE2E3-202ENST00000410062 TFCP2Q12800 502 aa29.56■■■□□ 2.32
UBE2E3-202ENST00000410062 USP17L1Q7RTZ2 530 aa29.56■■■□□ 2.32
UBE2E3-202ENST00000410062 SURF6O75683 361 aaKnown RBP29.56■■■□□ 2.32
UBE2E3-202ENST00000410062 IFIT1P09914 478 aaKnown RBP29.56■■■□□ 2.32
UBE2E3-202ENST00000410062 HIBADHP31937 336 aaKnown RBP29.56■■■□□ 2.32
UBE2E3-202ENST00000410062 LPIN2Q92539 896 aa29.56■■■□□ 2.32
UBE2E3-202ENST00000410062 GPRC5DQ9NZD1 345 aa29.56■■■□□ 2.32
UBE2E3-202ENST00000410062 EPHX2P34913 555 aa29.55■■■□□ 2.32
UBE2E3-202ENST00000410062 ATP2B3Q16720 1220 aa29.55■■■□□ 2.32
UBE2E3-202ENST00000410062 RPAP2Q8IXW5 612 aaPredicted RBP29.55■■■□□ 2.32
UBE2E3-202ENST00000410062 SUPT16HQ9Y5B9 1047 aaKnown RBP29.55■■■□□ 2.32
UBE2E3-202ENST00000410062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.55■■■□□ 2.32
UBE2E3-202ENST00000410062 SLC5A1P13866 664 aa29.54■■■□□ 2.32
UBE2E3-202ENST00000410062 IL1R1P14778 569 aa29.54■■■□□ 2.32
UBE2E3-202ENST00000410062 SIRT2Q8IXJ6 389 aa29.54■■■□□ 2.32
UBE2E3-202ENST00000410062 CRBNQ96SW2 442 aa29.54■■■□□ 2.32
UBE2E3-202ENST00000410062 MXD3Q9BW11 206 aa29.54■■■□□ 2.32
UBE2E3-202ENST00000410062 SHTN1A0MZ66 631 aa29.53■■■□□ 2.32
UBE2E3-202ENST00000410062 TOMM70O94826 608 aa29.53■■■□□ 2.32
UBE2E3-202ENST00000410062 GTF2IP78347 998 aa29.53■■■□□ 2.32
UBE2E3-202ENST00000410062 TTLL5Q6EMB2 1281 aa29.53■■■□□ 2.32
UBE2E3-202ENST00000410062 RSBN1LQ6PCB5 846 aaPredicted RBP29.53■■■□□ 2.32
UBE2E3-202ENST00000410062 ZNF646O15015 1829 aaPredicted RBP29.53■■■□□ 2.32
UBE2E3-202ENST00000410062 BCAMP50895 628 aa29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 OS9Q13438 667 aaPredicted RBP29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 CAVIN4Q5BKX8 364 aa29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 DACT2Q5SW24 774 aa29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 FBXO33Q7Z6M2 555 aa29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 VPS37DQ86XT2 251 aa29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 CNOT7Q9UIV1 285 aaKnown RBP29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 SASH1O94885 1247 aa29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 POTEIP0CG38 1075 aa29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 POTEJP0CG39 1038 aa29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 STRIP1Q5VSL9 837 aa29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 NOP58Q9Y2X3 529 aaKnown RBP29.52■■■□□ 2.32
UBE2E3-202ENST00000410062 RPS12P25398 132 aaKnown RBP29.51■■■□□ 2.31
UBE2E3-202ENST00000410062 EAPPQ56P03 285 aaPredicted RBP29.51■■■□□ 2.31
UBE2E3-202ENST00000410062 MICALL2Q8IY33 904 aa29.51■■■□□ 2.31
UBE2E3-202ENST00000410062 DPF2Q92785 391 aa29.51■■■□□ 2.31
UBE2E3-202ENST00000410062 JAG2Q9Y219 1238 aa29.51■■■□□ 2.31
UBE2E3-202ENST00000410062 TIMM10P62072 90 aa29.5■■■□□ 2.31
UBE2E3-202ENST00000410062 TDRD7Q8NHU6 1098 aaKnown RBP29.5■■■□□ 2.31
UBE2E3-202ENST00000410062 IQSEC3Q9UPP2 1182 aaPredicted RBP29.5■■■□□ 2.31
UBE2E3-202ENST00000410062 EXOC6BQ9Y2D4 811 aa29.49■■■□□ 2.31
UBE2E3-202ENST00000410062 HMMRO75330 724 aa29.48■■■□□ 2.31
UBE2E3-202ENST00000410062 AGBL3Q8NEM8 1001 aa29.48■■■□□ 2.31
UBE2E3-202ENST00000410062 AKAP2Q9Y2D5 859 aa29.48■■■□□ 2.31
UBE2E3-202ENST00000410062 A0A1B0GUL7 405 aa29.47■■■□□ 2.31
UBE2E3-202ENST00000410062 ADORA1P30542 326 aa29.47■■■□□ 2.31
UBE2E3-202ENST00000410062 PNMA8AQ86V59 439 aaPredicted RBP29.47■■■□□ 2.31
UBE2E3-202ENST00000410062 RBM46Q8TBY0 533 aaKnown RBP29.47■■■□□ 2.31
UBE2E3-202ENST00000410062 GMLQ99445 158 aa29.47■■■□□ 2.31
UBE2E3-202ENST00000410062 ADARB2Q9NS39 739 aaKnown RBP29.47■■■□□ 2.31
UBE2E3-202ENST00000410062 H7C1D1 291 aa29.47■■■□□ 2.31
UBE2E3-202ENST00000410062 C1QTNF8P60827 252 aa29.46■■■□□ 2.31
UBE2E3-202ENST00000410062 ZNF609O15014 1411 aa29.46■■■□□ 2.31
UBE2E3-202ENST00000410062 ARAP2Q8WZ64 1704 aa29.46■■■□□ 2.31
UBE2E3-202ENST00000410062 FRAT2O75474 233 aaPredicted RBP29.45■■■□□ 2.31
UBE2E3-202ENST00000410062 NEUROD6Q96NK8 337 aa29.45■■■□□ 2.31
UBE2E3-202ENST00000410062 USP50Q70EL3 339 aaPredicted RBP29.44■■■□□ 2.3
UBE2E3-202ENST00000410062 SAMD7Q7Z3H4 446 aa29.44■■■□□ 2.3
UBE2E3-202ENST00000410062 TRPM4Q8TD43 1214 aa29.44■■■□□ 2.3
UBE2E3-202ENST00000410062 CLEC11AQ9Y240 323 aa29.44■■■□□ 2.3
UBE2E3-202ENST00000410062 MYO3BQ8WXR4 1341 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms