RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 IL2RBP14784 551 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 DNAJA1P31689 397 aaKnown RBP5.81□□□□□ -1.48
SF3B1-202ENST00000409915 MTHFSP49914 203 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 PTK7Q13308 1070 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 PDE3BQ13370 1112 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 DDB1Q16531 1140 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 Q6ZNB5 142 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 APBB1IPQ7Z5R6 666 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-202ENST00000409915 JAZF1Q86VZ6 243 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 PLEKHM2Q8IWE5 1019 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 DEPDC4Q8N2C3 294 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 NFATC2IPQ8NCF5 419 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 HELBQ8NG08 1087 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-202ENST00000409915 C1orf216Q8TAB5 229 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 BRINP2Q9C0B6 783 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 IL21Q9HBE4 155 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 MKRN1Q9UHC7 482 aaKnown RBP5.81□□□□□ -1.48
SF3B1-202ENST00000409915 FAN1Q9Y2M0 1017 aa5.81□□□□□ -1.48
SF3B1-202ENST00000409915 COL3A1P02461 1466 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-202ENST00000409915 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.8□□□□□ -1.48
SF3B1-202ENST00000409915 RASA1P20936 1047 aa5.8□□□□□ -1.48
SF3B1-202ENST00000409915 RBM10P98175 930 aaKnown RBP5.8□□□□□ -1.48
SF3B1-202ENST00000409915 SETQ01105 290 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-202ENST00000409915 GNL2Q13823 731 aaKnown RBP5.8□□□□□ -1.48
SF3B1-202ENST00000409915 PUS10Q3MIT2 529 aaKnown RBP5.8□□□□□ -1.48
SF3B1-202ENST00000409915 RNF187Q5TA31 235 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-202ENST00000409915 SPTY2D1Q68D10 685 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-202ENST00000409915 ANKMY2Q8IV38 441 aa5.8□□□□□ -1.48
SF3B1-202ENST00000409915 MARCH10Q8NA82 808 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-202ENST00000409915 ACBD3Q9H3P7 528 aa5.8□□□□□ -1.48
SF3B1-202ENST00000409915 DMGDHQ9UI17 866 aaKnown RBP5.8□□□□□ -1.48
SF3B1-202ENST00000409915 OVOS2A0A0G2JMS6 1433 aa5.8□□□□□ -1.48
SF3B1-202ENST00000409915 IGSF1Q8N6C5 1336 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 DDX11L8A8MPP1 907 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 EXOC5O00471 708 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 TRIM37O94972 964 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 P4HBP07237 508 aaKnown RBP5.79□□□□□ -1.48
SF3B1-202ENST00000409915 PPP2R1AP30153 589 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 RALBP1Q15311 655 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 SWI5Q1ZZU3 235 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 ZNF746Q6NUN9 644 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-202ENST00000409915 PPP1R18Q6NYC8 613 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 PTF1AQ7RTS3 328 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 DEFB132Q7Z7B7 95 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 SULF1Q8IWU6 871 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 SMC5Q8IY18 1101 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 RGL4Q8IZJ4 473 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 DDX54Q8TDD1 881 aaKnown RBP5.79□□□□□ -1.48
SF3B1-202ENST00000409915 RAPGEF4Q8WZA2 1011 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 RNF34Q969K3 372 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 ACSBG1Q96GR2 724 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 OSBPL2Q9H1P3 480 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 COL4A3BPQ9Y5P4 624 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 NCAPD2Q15021 1401 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 SHANK3Q9BYB0 1731 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 PARD3Q8TEW0 1356 aa5.79□□□□□ -1.48
SF3B1-202ENST00000409915 MAFGO15525 162 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 C21orf2O43822 256 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 HMOX1P09601 288 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 RGPD1P0DJD0 1748 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 TATP17735 454 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-202ENST00000409915 HSD3B2P26439 372 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 IL13P35225 146 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 TNNI2P48788 182 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 FANCCQ00597 558 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 RBL2Q08999 1139 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 BMS1Q14692 1282 aaKnown RBP5.78□□□□□ -1.48
SF3B1-202ENST00000409915 FAM196AQ6ZSG2 479 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 PMM1Q92871 262 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 YTHDC1Q96MU7 727 aaKnown RBP5.78□□□□□ -1.48
SF3B1-202ENST00000409915 GMLQ99445 158 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 PRR14Q9BWN1 585 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 TNS1Q9HBL0 1735 aaKnown RBP5.78□□□□□ -1.48
SF3B1-202ENST00000409915 GABBR1Q9UBS5 961 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 PCDHB3Q9Y5E6 796 aa5.78□□□□□ -1.48
SF3B1-202ENST00000409915 ATP5J2-PTCD1G3V325 749 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 U2SURPO15042 1029 aaKnown RBP5.77□□□□□ -1.49
SF3B1-202ENST00000409915 KCNQ2O43526 872 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 GFRA3O60609 400 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 DIAPH1O60610 1272 aaKnown RBP5.77□□□□□ -1.49
SF3B1-202ENST00000409915 PRMT3O60678 531 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 ZPR1O75312 459 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 EIF3JO75822 258 aaKnown RBP5.77□□□□□ -1.49
SF3B1-202ENST00000409915 FDX1P10109 184 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 DPYDQ12882 1025 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 NR6A1Q15406 480 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 PLEKHG6Q3KR16 790 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 SOGA3Q5TF21 947 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 SULT6B1Q6IMI4 303 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 FILIP1Q7Z7B0 1213 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 EMID1Q96A84 441 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-202ENST00000409915 PRKD2Q9BZL6 878 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 MRS2Q9HD23 443 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 METTL5Q9NRN9 209 aaKnown RBP5.77□□□□□ -1.49
SF3B1-202ENST00000409915 MRPL42Q9Y6G3 142 aaKnown RBP5.77□□□□□ -1.49
SF3B1-202ENST00000409915 PKD1L3Q7Z443 1732 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 DOT1LQ8TEK3 1739 aa5.77□□□□□ -1.49
SF3B1-202ENST00000409915 HMGB1P1B2RPK0 211 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-202ENST00000409915 CYP27B1O15528 508 aa5.76□□□□□ -1.49
SF3B1-202ENST00000409915 ACTN4O43707 911 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms