RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 G2E3Q7L622 706 aa19.35■□□□□ 0.69
PCDHA13-202ENST00000409494 USP19O94966 1318 aa19.35■□□□□ 0.69
PCDHA13-202ENST00000409494 LMOD1P29536 600 aaPredicted RBP19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 TNNI3KQ59H18 835 aa19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 FKBP15Q5T1M5 1219 aa19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 PLEKHM2Q8IWE5 1019 aa19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 CCDC112Q8NEF3 446 aa19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 FPGT-TNNI3KV9GXZ4 949 aa19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 SEC24BO95487 1268 aa19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 XRCC6P12956 609 aaKnown RBP eCLIP19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 NAP1L4Q99733 375 aaKnown RBP19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 A0A1B0GUL7 405 aa19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 FAM196AQ6ZSG2 479 aa19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 CCDC82Q8N4S0 544 aa19.34■□□□□ 0.69
PCDHA13-202ENST00000409494 EIF5P55010 431 aaKnown RBP19.33■□□□□ 0.69
PCDHA13-202ENST00000409494 WDR78Q5VTH9 848 aa19.33■□□□□ 0.69
PCDHA13-202ENST00000409494 CNNM3Q8NE01 707 aa19.33■□□□□ 0.69
PCDHA13-202ENST00000409494 NOM1Q5C9Z4 860 aaKnown RBP19.33■□□□□ 0.68
PCDHA13-202ENST00000409494 DHX32Q7L7V1 743 aaKnown RBP19.33■□□□□ 0.68
PCDHA13-202ENST00000409494 IL17REQ8NFR9 667 aa19.33■□□□□ 0.68
PCDHA13-202ENST00000409494 LMTK2Q8IWU2 1503 aa19.33■□□□□ 0.68
PCDHA13-202ENST00000409494 CETN1Q12798 172 aa19.33■□□□□ 0.68
PCDHA13-202ENST00000409494 KCNG4Q8TDN1 519 aa19.33■□□□□ 0.68
PCDHA13-202ENST00000409494 MCM9Q9NXL9 1143 aa19.32■□□□□ 0.68
PCDHA13-202ENST00000409494 C6orf50Q9HD87 102 aa19.32■□□□□ 0.68
PCDHA13-202ENST00000409494 RBM28Q9NW13 759 aaKnown RBP19.32■□□□□ 0.68
PCDHA13-202ENST00000409494 UFL1O94874 794 aa19.32■□□□□ 0.68
PCDHA13-202ENST00000409494 APBA3O96018 575 aa19.32■□□□□ 0.68
PCDHA13-202ENST00000409494 PPP2R5BQ15173 497 aa19.32■□□□□ 0.68
PCDHA13-202ENST00000409494 MAGEB6Q8N7X4 407 aa19.32■□□□□ 0.68
PCDHA13-202ENST00000409494 APPBP2Q92624 585 aa19.32■□□□□ 0.68
PCDHA13-202ENST00000409494 PRC1O43663 620 aa19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 TSHZ3Q63HK5 1081 aa19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 MATR3P43243 847 aaKnown RBP eCLIP19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 HSP90B2PQ58FF3 399 aa19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 VPS36Q86VN1 386 aa19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 TMX3Q96JJ7 454 aa19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 KDRP35968 1356 aa19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 CHMLP26374 656 aa19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 DDX17Q92841 729 aaKnown RBP19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 GLT8D2Q9H1C3 349 aa19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 IQSEC3Q9UPP2 1182 aaPredicted RBP19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 CDK12Q9NYV4 1490 aaPredicted RBP19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 NLGN1Q8N2Q7 840 aa19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 RMND1Q9NWS8 449 aa19.31■□□□□ 0.68
PCDHA13-202ENST00000409494 KIF2AO00139 706 aaPredicted RBP19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 CCDC102BQ68D86 513 aa19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 TMC4Q7Z404 712 aa19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 ADGRL3Q9HAR2 1447 aa19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 ERLIN2O94905 339 aa19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 IL6STP40189 918 aaPredicted RBP19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 FAM114A1Q8IWE2 563 aa19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 TMEM87BQ96K49 555 aa19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 ALG1Q9BT22 464 aa19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 GNA11P29992 359 aa19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 UBE2HP62256 183 aa19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 FSIP1Q8NA03 581 aa19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 HELBQ8NG08 1087 aaPredicted RBP19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 INTS4Q96HW7 963 aaKnown RBP19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 PCCAP05165 728 aaPredicted RBP19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 ATL3Q6DD88 541 aa19.3■□□□□ 0.68
PCDHA13-202ENST00000409494 ERBB3P21860 1342 aa19.29■□□□□ 0.68
PCDHA13-202ENST00000409494 CETN2P41208 172 aa19.29■□□□□ 0.68
PCDHA13-202ENST00000409494 IQCEQ6IPM2 695 aa19.29■□□□□ 0.68
PCDHA13-202ENST00000409494 NEURL1BA8MQ27 555 aa19.29■□□□□ 0.68
PCDHA13-202ENST00000409494 DPP8Q6V1X1 898 aaPredicted RBP19.29■□□□□ 0.68
PCDHA13-202ENST00000409494 VAT1LQ9HCJ6 419 aa19.29■□□□□ 0.68
PCDHA13-202ENST00000409494 RNF17Q9BXT8 1623 aaKnown RBP19.29■□□□□ 0.68
PCDHA13-202ENST00000409494 ZSCAN22P10073 491 aaPredicted RBP19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 HCLS1P14317 486 aaPredicted RBP19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 ADGRB3O60242 1522 aa19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 CFAP100Q494V2 611 aa19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 RRP36Q96EU6 259 aaKnown RBP19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 RPS8P62241 208 aaKnown RBP19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 GUCY1B3Q02153 619 aa19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 CREB3L3Q68CJ9 461 aa19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 CCDC150Q8NCX0 1101 aa19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 Q6ZUG5 572 aa19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 XAGE2Q96GT9 111 aa19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 SCLT1Q96NL6 688 aa19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 SPATA31A3Q5VYP0 1347 aa19.28■□□□□ 0.68
PCDHA13-202ENST00000409494 ABCC4O15439 1325 aa19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 F8W031 263 aaPredicted RBP19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 CLCN1P35523 988 aa19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 CAMK4Q16566 473 aa19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 ZSCAN23Q3MJ62 389 aa19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 TEX11Q8IYF3 940 aa19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 KBTBD3Q8NAB2 608 aa19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 EIF6P56537 245 aaKnown RBP19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 ZBTB38Q8NAP3 1195 aaPredicted RBP19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 GDPD2Q9HCC8 539 aa19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 PRR36Q9H6K5 1346 aa19.27■□□□□ 0.68
PCDHA13-202ENST00000409494 FILIP1Q7Z7B0 1213 aa19.27■□□□□ 0.67
PCDHA13-202ENST00000409494 QTRT2Q9H974 415 aaKnown RBP19.27■□□□□ 0.67
PCDHA13-202ENST00000409494 SUCLG2Q96I99 432 aa19.26■□□□□ 0.67
PCDHA13-202ENST00000409494 PAXIP1Q6ZW49 1069 aaPredicted RBP19.26■□□□□ 0.67
PCDHA13-202ENST00000409494 PANK2Q9BZ23 570 aa19.26■□□□□ 0.67
PCDHA13-202ENST00000409494 USP25Q9UHP3 1055 aa19.26■□□□□ 0.67
PCDHA13-202ENST00000409494 AGLP35573 1532 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms