RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 IRS2Q9Y4H2 1338 aa24.7■■□□□ 1.54
PDLIM2-207ENST00000409417 WDR90Q96KV7 1748 aa24.69■■□□□ 1.54
PDLIM2-207ENST00000409417 IQCA1LA6NCM1 817 aa24.69■■□□□ 1.54
PDLIM2-207ENST00000409417 RRP1P56182 461 aaKnown RBP24.69■■□□□ 1.54
PDLIM2-207ENST00000409417 ATP8B2P98198 1209 aa24.69■■□□□ 1.54
PDLIM2-207ENST00000409417 KCNQ5Q9NR82 932 aa24.69■■□□□ 1.54
PDLIM2-207ENST00000409417 ZBTB40Q9NUA8 1239 aa24.69■■□□□ 1.54
PDLIM2-207ENST00000409417 IL15P40933 162 aaPredicted RBP24.68■■□□□ 1.54
PDLIM2-207ENST00000409417 POLA2Q14181 598 aa24.68■■□□□ 1.54
PDLIM2-207ENST00000409417 PSMD14O00487 310 aa24.67■■□□□ 1.54
PDLIM2-207ENST00000409417 SSH3Q8TE77 659 aa24.67■■□□□ 1.54
PDLIM2-207ENST00000409417 A0A1B0GUL6 1792 aa24.66■■□□□ 1.54
PDLIM2-207ENST00000409417 SCNN1DP51172 638 aa24.65■■□□□ 1.54
PDLIM2-207ENST00000409417 PUM3Q15397 648 aaKnown RBP24.65■■□□□ 1.54
PDLIM2-207ENST00000409417 ZNF804AQ7Z570 1209 aa24.65■■□□□ 1.54
PDLIM2-207ENST00000409417 CEP126Q9P2H0 1117 aa24.65■■□□□ 1.54
PDLIM2-207ENST00000409417 HACL1Q9UJ83 578 aa24.65■■□□□ 1.54
PDLIM2-207ENST00000409417 VIL1P09327 827 aaKnown RBP24.64■■□□□ 1.54
PDLIM2-207ENST00000409417 CEP85Q6P2H3 762 aa24.64■■□□□ 1.54
PDLIM2-207ENST00000409417 C16orf71Q8IYS4 520 aaPredicted RBP24.64■■□□□ 1.54
PDLIM2-207ENST00000409417 LMOD1P29536 600 aaPredicted RBP24.64■■□□□ 1.53
PDLIM2-207ENST00000409417 GMPSP49915 693 aaPredicted RBP24.64■■□□□ 1.53
PDLIM2-207ENST00000409417 TAF1DQ9H5J8 278 aaPredicted RBP24.64■■□□□ 1.53
PDLIM2-207ENST00000409417 CD209Q9NNX6 404 aa24.64■■□□□ 1.53
PDLIM2-207ENST00000409417 USP17L3A6NCW0 530 aa24.63■■□□□ 1.53
PDLIM2-207ENST00000409417 USP17L4A6NCW7 530 aa24.63■■□□□ 1.53
PDLIM2-207ENST00000409417 TOMM70O94826 608 aa24.63■■□□□ 1.53
PDLIM2-207ENST00000409417 FGFR2P21802 821 aa24.63■■□□□ 1.53
PDLIM2-207ENST00000409417 USP17L1Q7RTZ2 530 aa24.63■■□□□ 1.53
PDLIM2-207ENST00000409417 GPRC5DQ9NZD1 345 aa24.63■■□□□ 1.53
PDLIM2-207ENST00000409417 RPS12P25398 132 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-207ENST00000409417 LPIN2Q92539 896 aa24.62■■□□□ 1.53
PDLIM2-207ENST00000409417 DPF2Q92785 391 aa24.62■■□□□ 1.53
PDLIM2-207ENST00000409417 FAM84BQ96KN1 310 aaPredicted RBP24.62■■□□□ 1.53
PDLIM2-207ENST00000409417 SCN4AP35499 1836 aa24.62■■□□□ 1.53
PDLIM2-207ENST00000409417 SCN9AQ15858 1988 aa24.61■■□□□ 1.53
PDLIM2-207ENST00000409417 IFIT1P09914 478 aaKnown RBP24.61■■□□□ 1.53
PDLIM2-207ENST00000409417 IL1R1P14778 569 aa24.61■■□□□ 1.53
PDLIM2-207ENST00000409417 EPHX2P34913 555 aa24.61■■□□□ 1.53
PDLIM2-207ENST00000409417 EPS15P42566 896 aa24.61■■□□□ 1.53
PDLIM2-207ENST00000409417 G3BP1Q13283 466 aaKnown RBP eCLIP24.61■■□□□ 1.53
PDLIM2-207ENST00000409417 ZBTB12Q9Y330 459 aaPredicted RBP24.61■■□□□ 1.53
PDLIM2-207ENST00000409417 HIBADHP31937 336 aaKnown RBP24.6■■□□□ 1.53
PDLIM2-207ENST00000409417 GYG1P46976 350 aa24.6■■□□□ 1.53
PDLIM2-207ENST00000409417 STRIP1Q5VSL9 837 aa24.6■■□□□ 1.53
PDLIM2-207ENST00000409417 RPAP2Q8IXW5 612 aaPredicted RBP24.6■■□□□ 1.53
PDLIM2-207ENST00000409417 SLC5A1P13866 664 aa24.59■■□□□ 1.53
PDLIM2-207ENST00000409417 CAVIN4Q5BKX8 364 aa24.59■■□□□ 1.53
PDLIM2-207ENST00000409417 RSBN1LQ6PCB5 846 aaPredicted RBP24.59■■□□□ 1.53
PDLIM2-207ENST00000409417 FBXO33Q7Z6M2 555 aa24.59■■□□□ 1.53
PDLIM2-207ENST00000409417 PNMA8AQ86V59 439 aaPredicted RBP24.59■■□□□ 1.53
PDLIM2-207ENST00000409417 AGBL3Q8NEM8 1001 aa24.59■■□□□ 1.53
PDLIM2-207ENST00000409417 RBM46Q8TBY0 533 aaKnown RBP24.59■■□□□ 1.53
PDLIM2-207ENST00000409417 ATP2B3Q16720 1220 aa24.58■■□□□ 1.53
PDLIM2-207ENST00000409417 TTLL5Q6EMB2 1281 aa24.58■■□□□ 1.53
PDLIM2-207ENST00000409417 VPS37DQ86XT2 251 aa24.58■■□□□ 1.53
PDLIM2-207ENST00000409417 NOP58Q9Y2X3 529 aaKnown RBP24.58■■□□□ 1.53
PDLIM2-207ENST00000409417 ZNF609O15014 1411 aa24.58■■□□□ 1.53
PDLIM2-207ENST00000409417 SURF6O75683 361 aaKnown RBP24.58■■□□□ 1.52
PDLIM2-207ENST00000409417 TFCP2Q12800 502 aa24.58■■□□□ 1.52
PDLIM2-207ENST00000409417 DACT2Q5SW24 774 aa24.58■■□□□ 1.52
PDLIM2-207ENST00000409417 CNOT7Q9UIV1 285 aaKnown RBP24.58■■□□□ 1.52
PDLIM2-207ENST00000409417 SASH1O94885 1247 aa24.57■■□□□ 1.52
PDLIM2-207ENST00000409417 GTF2IP78347 998 aa24.57■■□□□ 1.52
PDLIM2-207ENST00000409417 TDRD7Q8NHU6 1098 aaKnown RBP24.57■■□□□ 1.52
PDLIM2-207ENST00000409417 GMLQ99445 158 aa24.57■■□□□ 1.52
PDLIM2-207ENST00000409417 ADARB2Q9NS39 739 aaKnown RBP24.57■■□□□ 1.52
PDLIM2-207ENST00000409417 AKAP2Q9Y2D5 859 aa24.57■■□□□ 1.52
PDLIM2-207ENST00000409417 BCAMP50895 628 aa24.56■■□□□ 1.52
PDLIM2-207ENST00000409417 C1QTNF8P60827 252 aa24.56■■□□□ 1.52
PDLIM2-207ENST00000409417 MICALL2Q8IY33 904 aa24.56■■□□□ 1.52
PDLIM2-207ENST00000409417 FBXW7Q969H0 707 aa24.56■■□□□ 1.52
PDLIM2-207ENST00000409417 H7C1D1 291 aa24.55■■□□□ 1.52
PDLIM2-207ENST00000409417 HMMRO75330 724 aa24.55■■□□□ 1.52
PDLIM2-207ENST00000409417 EAPPQ56P03 285 aaPredicted RBP24.55■■□□□ 1.52
PDLIM2-207ENST00000409417 USP50Q70EL3 339 aaPredicted RBP24.55■■□□□ 1.52
PDLIM2-207ENST00000409417 SIRT2Q8IXJ6 389 aa24.55■■□□□ 1.52
PDLIM2-207ENST00000409417 MYO3BQ8WXR4 1341 aa24.55■■□□□ 1.52
PDLIM2-207ENST00000409417 OS9Q13438 667 aaPredicted RBP24.54■■□□□ 1.52
PDLIM2-207ENST00000409417 LDHDQ86WU2 507 aa24.54■■□□□ 1.52
PDLIM2-207ENST00000409417 SMC1BQ8NDV3 1235 aa24.54■■□□□ 1.52
PDLIM2-207ENST00000409417 SHTN1A0MZ66 631 aa24.53■■□□□ 1.52
PDLIM2-207ENST00000409417 POTEIP0CG38 1075 aa24.53■■□□□ 1.52
PDLIM2-207ENST00000409417 POTEJP0CG39 1038 aa24.53■■□□□ 1.52
PDLIM2-207ENST00000409417 MXD3Q9BW11 206 aa24.53■■□□□ 1.52
PDLIM2-207ENST00000409417 PSME4Q14997 1843 aa24.53■■□□□ 1.52
PDLIM2-207ENST00000409417 FAM205AQ6ZU69 1335 aa24.53■■□□□ 1.52
PDLIM2-207ENST00000409417 USP17L8P0C7I0 530 aa24.52■■□□□ 1.52
PDLIM2-207ENST00000409417 FSTL1Q12841 308 aa24.52■■□□□ 1.52
PDLIM2-207ENST00000409417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.52■■□□□ 1.52
PDLIM2-207ENST00000409417 A0A1B0GUL7 405 aa24.51■■□□□ 1.51
PDLIM2-207ENST00000409417 ZNF280AP59817 542 aaPredicted RBP24.51■■□□□ 1.51
PDLIM2-207ENST00000409417 TIMM10P62072 90 aa24.51■■□□□ 1.51
PDLIM2-207ENST00000409417 SUPT16HQ9Y5B9 1047 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-207ENST00000409417 FKBP1AP62942 108 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-207ENST00000409417 HSP90AB4PQ58FF6 505 aa24.51■■□□□ 1.51
PDLIM2-207ENST00000409417 CHADLQ6NUI6 762 aa24.51■■□□□ 1.51
PDLIM2-207ENST00000409417 CRBNQ96SW2 442 aa24.51■■□□□ 1.51
PDLIM2-207ENST00000409417 GPR108Q9NPR9 543 aa24.51■■□□□ 1.51
PDLIM2-207ENST00000409417 FRAT2O75474 233 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms