RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 RNF216Q9NWF9 866 aaPredicted RBP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 BCCIPQ9P287 314 aaKnown RBP eCLIP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 SPATA31A5Q5VU36 1347 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 SPATA31A7Q8IWB4 1347 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 ABCC4O15439 1325 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 PTPRCP08575 1304 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 IFIT2P09913 472 aaKnown RBP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 CCDC172P0C7W6 258 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 TYRO3Q06418 890 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 SMC1AQ14683 1233 aaKnown RBP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 FILIP1LQ4L180 1135 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 SPATA31A1Q5TZJ5 1347 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 RBM33Q96EV2 1170 aaKnown RBP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 INCENPQ9NQS7 918 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 PDRG1Q9NUG6 133 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 RAI14Q9P0K7 980 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 PYCARDQ9ULZ3 195 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 EPB41L2O43491 1005 aaKnown RBP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 SMARCA5O60264 1052 aaPredicted RBP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 ONECUT3O60422 494 aaPredicted RBP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 ERLIN2O94905 339 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 MYCNP04198 464 aaPredicted RBP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 PHKG2P15735 406 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 CLNS1AP54105 237 aaKnown RBP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 NUCB1Q02818 461 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 HDAC1Q13547 482 aaPredicted RBP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 JAKMIP1Q96N16 626 aaKnown RBP6.78□□□□□ -1.32
HDAC9-203ENST00000406072 BRMS1Q9HCU9 246 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 DACT1Q9NYF0 836 aa6.78□□□□□ -1.32
HDAC9-203ENST00000406072 TAF1LQ8IZX4 1826 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 TUBGCP6Q96RT7 1819 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 A0A0G2JS52 829 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 RAD51AP2Q09MP3 1159 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 LRMPQ12912 555 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 VPS72Q15906 364 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 SAMD1Q6SPF0 538 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-203ENST00000406072 CNTROBQ8N137 903 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 DCAF5Q96JK2 942 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 ZSCAN31Q96LW9 406 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-203ENST00000406072 SCLT1Q96NL6 688 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 DDX41Q9UJV9 622 aaKnown RBP6.77□□□□□ -1.33
HDAC9-203ENST00000406072 TNS1Q9HBL0 1735 aaKnown RBP6.77□□□□□ -1.33
HDAC9-203ENST00000406072 RNMTO43148 476 aaKnown RBP6.77□□□□□ -1.33
HDAC9-203ENST00000406072 CAVIN2O95810 425 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 MAP4K4O95819 1239 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-203ENST00000406072 ZSCAN22P10073 491 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-203ENST00000406072 CPLX2Q6PUV4 134 aaKnown RBP6.77□□□□□ -1.33
HDAC9-203ENST00000406072 DDX54Q8TDD1 881 aaKnown RBP6.77□□□□□ -1.33
HDAC9-203ENST00000406072 NECTIN2Q92692 538 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 SYTL4Q96C24 671 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-203ENST00000406072 MBIPQ9NS73 344 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 LIMCH1Q9UPQ0 1083 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 FAM83GA6ND36 823 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 VAMP4O75379 141 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 FBLN1P23142 703 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 INPP5BP32019 993 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 CHAMP1Q96JM3 812 aa6.77□□□□□ -1.33
HDAC9-203ENST00000406072 SURF6O75683 361 aaKnown RBP6.76□□□□□ -1.33
HDAC9-203ENST00000406072 DNM1Q05193 864 aaKnown RBP6.76□□□□□ -1.33
HDAC9-203ENST00000406072 CCDC181Q5TID7 509 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 CCDC150Q8NCX0 1101 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 GPT2Q8TD30 523 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 CARD6Q9BX69 1037 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 BIN1O00499 593 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 SSBP05455 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
HDAC9-203ENST00000406072 TATP17735 454 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-203ENST00000406072 HSPA4P34932 840 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 TRIM29Q14134 588 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 TAF7Q15545 349 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-203ENST00000406072 FMNL3Q8IVF7 1028 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 MRPL50Q8N5N7 158 aaKnown RBP6.76□□□□□ -1.33
HDAC9-203ENST00000406072 CCDC148Q8NFR7 591 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 GOLGA5Q8TBA6 731 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 KIAA1524Q8TCG1 905 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 GOLGA1Q92805 767 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 NCAPGQ9BPX3 1015 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 RABEP2Q9H5N1 569 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 GADD45BO75293 160 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-203ENST00000406072 PKP1Q13835 747 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 STX1AQ16623 288 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 AP1ARQ63HQ0 302 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 IL17REQ8NFR9 667 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 ATRIPQ8WXE1 791 aa6.76□□□□□ -1.33
HDAC9-203ENST00000406072 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.76□□□□□ -1.33
HDAC9-203ENST00000406072 TUBB4AP04350 444 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 HMOX1P09601 288 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 MCM3P25205 808 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 GCKP35557 465 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 LIG3P49916 1009 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 PPP2R3AQ06190 1150 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 TWISTNBQ3B726 338 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-203ENST00000406072 ISM2Q6H9L7 571 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 HDXQ7Z353 690 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 IFNL2Q8IZJ0 200 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 MKRN1Q9UHC7 482 aaKnown RBP6.75□□□□□ -1.33
HDAC9-203ENST00000406072 BTAF1O14981 1849 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 GOLGA6L9A6NEM1 432 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 CTAGE5O15320 804 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 IL2RBP14784 551 aa6.75□□□□□ -1.33
HDAC9-203ENST00000406072 GJB2P29033 226 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms