RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 CT47A1Q5JQC4 288 aaPredicted RBP20.35■□□□□ 0.85
SNED1-204ENST00000401884 NEURL1BA8MQ27 555 aa20.35■□□□□ 0.85
SNED1-204ENST00000401884 EIF3JO75822 258 aaKnown RBP20.35■□□□□ 0.85
SNED1-204ENST00000401884 SEC63Q9UGP8 760 aaKnown RBP20.35■□□□□ 0.85
SNED1-204ENST00000401884 CDC37L1Q7L3B6 337 aa20.34■□□□□ 0.85
SNED1-204ENST00000401884 CCDC191Q8NCU4 936 aa20.34■□□□□ 0.85
SNED1-204ENST00000401884 CHD1O14646 1710 aa20.34■□□□□ 0.85
SNED1-204ENST00000401884 A0A1B0GVL5 298 aa20.34■□□□□ 0.85
SNED1-204ENST00000401884 CASQ1P31415 396 aa20.34■□□□□ 0.85
SNED1-204ENST00000401884 LEKR1Q6ZMV7 388 aa20.34■□□□□ 0.85
SNED1-204ENST00000401884 RASEFQ8IZ41 740 aa20.34■□□□□ 0.85
SNED1-204ENST00000401884 LEO1Q8WVC0 666 aaPredicted RBP20.34■□□□□ 0.85
SNED1-204ENST00000401884 TMX1Q9H3N1 280 aa20.34■□□□□ 0.85
SNED1-204ENST00000401884 ABCC3O15438 1527 aa20.33■□□□□ 0.85
SNED1-204ENST00000401884 JAK2O60674 1132 aa20.33■□□□□ 0.85
SNED1-204ENST00000401884 UBA7P41226 1012 aa20.33■□□□□ 0.85
SNED1-204ENST00000401884 DZIP3Q86Y13 1208 aaKnown RBP20.33■□□□□ 0.85
SNED1-204ENST00000401884 PKNOX2Q96KN3 472 aa20.33■□□□□ 0.85
SNED1-204ENST00000401884 SPDYE4A6NLX3 237 aa20.33■□□□□ 0.84
SNED1-204ENST00000401884 KIF5BP33176 963 aa20.33■□□□□ 0.84
SNED1-204ENST00000401884 RBM5P52756 815 aaKnown RBP eCLIP20.33■□□□□ 0.84
SNED1-204ENST00000401884 BRAPQ7Z569 592 aa20.33■□□□□ 0.84
SNED1-204ENST00000401884 GPT2Q8TD30 523 aa20.33■□□□□ 0.84
SNED1-204ENST00000401884 ATP5JP18859 108 aa20.33■□□□□ 0.84
SNED1-204ENST00000401884 PDE4BQ07343 736 aa20.33■□□□□ 0.84
SNED1-204ENST00000401884 ATL3Q6DD88 541 aa20.33■□□□□ 0.84
SNED1-204ENST00000401884 NUP88Q99567 741 aaPredicted RBP20.32■□□□□ 0.84
SNED1-204ENST00000401884 A0A0D9SFI3 127 aa20.32■□□□□ 0.84
SNED1-204ENST00000401884 GNG11P61952 73 aa20.32■□□□□ 0.84
SNED1-204ENST00000401884 FAM160A1Q05DH4 1040 aa20.32■□□□□ 0.84
SNED1-204ENST00000401884 LLPHQ9BRT6 129 aaKnown RBP20.32■□□□□ 0.84
SNED1-204ENST00000401884 USP6P35125 1406 aa20.32■□□□□ 0.84
SNED1-204ENST00000401884 CDR1P51861 262 aa20.32■□□□□ 0.84
SNED1-204ENST00000401884 SKIDA1Q1XH10 827 aa20.32■□□□□ 0.84
SNED1-204ENST00000401884 PCDH11XQ9BZA7 1347 aa20.32■□□□□ 0.84
SNED1-204ENST00000401884 PCDH11YQ9BZA8 1340 aa20.32■□□□□ 0.84
SNED1-204ENST00000401884 CROCC2H7BZ55 1655 aa20.32■□□□□ 0.84
SNED1-204ENST00000401884 AFMP43652 599 aa20.32■□□□□ 0.84
SNED1-204ENST00000401884 NIP7Q9Y221 180 aaKnown RBP eCLIP20.32■□□□□ 0.84
SNED1-204ENST00000401884 SLC4A8Q2Y0W8 1093 aa20.31■□□□□ 0.84
SNED1-204ENST00000401884 SETQ01105 290 aaPredicted RBP20.31■□□□□ 0.84
SNED1-204ENST00000401884 ANKRD18AQ8IVF6 992 aa20.31■□□□□ 0.84
SNED1-204ENST00000401884 STX8Q9UNK0 236 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 PTCH1Q13635 1447 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 ZNF397Q8NF99 534 aaPredicted RBP20.3■□□□□ 0.84
SNED1-204ENST00000401884 CCDC102AQ96A19 550 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 PPP1R9BQ96SB3 815 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 ATP6V1AP38606 617 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 PROSER3Q2NL68 480 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 IFIT1BQ5T764 474 aaKnown RBP20.3■□□□□ 0.84
SNED1-204ENST00000401884 OTUD7BQ6GQQ9 843 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 ACSBG1Q96GR2 724 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 CDK12Q9NYV4 1490 aaPredicted RBP20.3■□□□□ 0.84
SNED1-204ENST00000401884 CFAP74Q9C0B2 1584 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 TXLNBQ8N3L3 684 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 MAGEB6Q8N7X4 407 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 MIGA1Q8NAN2 632 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 APPBP2Q92624 585 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 XAGE2Q96GT9 111 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 ZSWIM6Q9HCJ5 1215 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 MTMR6Q9Y217 621 aa20.3■□□□□ 0.84
SNED1-204ENST00000401884 GOLGA6L9A6NEM1 432 aa20.29■□□□□ 0.84
SNED1-204ENST00000401884 ERICH4A6NGS2 130 aa20.29■□□□□ 0.84
SNED1-204ENST00000401884 N4BP3O15049 544 aa20.29■□□□□ 0.84
SNED1-204ENST00000401884 KAT14Q9H8E8 782 aa20.29■□□□□ 0.84
SNED1-204ENST00000401884 IFNKQ9P0W0 207 aa20.29■□□□□ 0.84
SNED1-204ENST00000401884 DNAI1Q9UI46 699 aa20.29■□□□□ 0.84
SNED1-204ENST00000401884 CCDC148Q8NFR7 591 aa20.29■□□□□ 0.84
SNED1-204ENST00000401884 MADDQ8WXG6 1647 aa20.29■□□□□ 0.84
SNED1-204ENST00000401884 ARAP3Q8WWN8 1544 aa20.29■□□□□ 0.84
SNED1-204ENST00000401884 TCP11L1Q9NUJ3 509 aa20.29■□□□□ 0.84
SNED1-204ENST00000401884 NAA16Q6N069 864 aaPredicted RBP20.28■□□□□ 0.84
SNED1-204ENST00000401884 CRNKL1Q9BZJ0 848 aaKnown RBP20.28■□□□□ 0.84
SNED1-204ENST00000401884 CLSTN2Q9H4D0 955 aa20.28■□□□□ 0.84
SNED1-204ENST00000401884 DDX17Q92841 729 aaKnown RBP20.28■□□□□ 0.84
SNED1-204ENST00000401884 TPCN1Q9ULQ1 816 aa20.28■□□□□ 0.84
SNED1-204ENST00000401884 HECW2Q9P2P5 1572 aa20.28■□□□□ 0.84
SNED1-204ENST00000401884 ARHGAP31Q2M1Z3 1444 aa20.28■□□□□ 0.84
SNED1-204ENST00000401884 TRIM75PA6NK02 468 aa20.28■□□□□ 0.84
SNED1-204ENST00000401884 HSPA2P54652 639 aa20.28■□□□□ 0.84
SNED1-204ENST00000401884 SPA17Q15506 151 aa20.28■□□□□ 0.84
SNED1-204ENST00000401884 FKBP15Q5T1M5 1219 aa20.28■□□□□ 0.84
SNED1-204ENST00000401884 LSG1Q9H089 658 aaKnown RBP20.28■□□□□ 0.84
SNED1-204ENST00000401884 GPAA1O43292 621 aa20.28■□□□□ 0.84
SNED1-204ENST00000401884 YEATS4O95619 227 aa20.28■□□□□ 0.84
SNED1-204ENST00000401884 LDHCP07864 332 aa20.28■□□□□ 0.84
SNED1-204ENST00000401884 UTP14AQ9BVJ6 771 aaKnown RBP20.28■□□□□ 0.84
SNED1-204ENST00000401884 RNF17Q9BXT8 1623 aaKnown RBP20.28■□□□□ 0.84
SNED1-204ENST00000401884 BMP15O95972 392 aa20.27■□□□□ 0.84
SNED1-204ENST00000401884 C17orf53Q8N3J3 647 aaPredicted RBP20.27■□□□□ 0.84
SNED1-204ENST00000401884 CBX8Q9HC52 389 aa20.27■□□□□ 0.84
SNED1-204ENST00000401884 VAT1LQ9HCJ6 419 aa20.27■□□□□ 0.84
SNED1-204ENST00000401884 KDRP35968 1356 aa20.27■□□□□ 0.84
SNED1-204ENST00000401884 B4E1Z4 1266 aa20.27■□□□□ 0.84
SNED1-204ENST00000401884 ADCK5Q3MIX3 580 aa20.27■□□□□ 0.84
SNED1-204ENST00000401884 MPHOSPH10O00566 681 aaKnown RBP20.27■□□□□ 0.84
SNED1-204ENST00000401884 BAG3O95817 575 aa20.27■□□□□ 0.84
SNED1-204ENST00000401884 ITGA6P23229 1130 aa20.27■□□□□ 0.84
SNED1-204ENST00000401884 CUL4AQ13619 759 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms