RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 MAP7D2Q96T17 732 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 MYL10Q9BUA6 226 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 ANKARQ7Z5J8 1434 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 KIAA1524Q8TCG1 905 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 BCL2L12Q9HB09 334 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 IQSEC3Q9UPP2 1182 aaPredicted RBP14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 EYA2O00167 538 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 RNF113AO15541 343 aaKnown RBP14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 ZAP70P43403 619 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 M0R2C6 588 aa14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 PRC1O43663 620 aa14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 NSUN7Q8NE18 718 aaKnown RBP14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 TMX1Q9H3N1 280 aa14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 PIK3C2AO00443 1686 aa14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 SNAP23O00161 211 aa14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 IL15P40933 162 aaPredicted RBP14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 RESTQ13127 1097 aa14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 OSBP2Q969R2 916 aa14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 ZNF213O14771 459 aa14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 IFIT5Q13325 482 aaKnown RBP14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 CCDC112Q8NEF3 446 aa14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 CACTINQ8WUQ7 758 aaKnown RBP14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 AIFM3Q96NN9 605 aa14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 ZNF609O15014 1411 aa14.8□□□□□ -0.04
PPP4R1-202ENST00000400555 HOMER1Q86YM7 354 aa14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 FUCA2Q9BTY2 467 aa14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 ZSCAN16Q9H4T2 348 aaPredicted RBP14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 SKILP12757 684 aa14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 U2AF2P26368 475 aaKnown RBP eCLIP14.79□□□□□ -0.043e-8■■■■■ 27.3
PPP4R1-202ENST00000400555 CEP57L1Q8IYX8 460 aa14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 XAGE2Q96GT9 111 aa14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 PRIMPOLQ96LW4 560 aa14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 INCENPQ9NQS7 918 aa14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 LMOD1P29536 600 aaPredicted RBP14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 RFX5P48382 616 aaPredicted RBP14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 CCDC144BQ3MJ40 725 aa14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 GOLPH3LQ9H4A5 285 aa14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 TBC1D2BQ9UPU7 963 aa14.79□□□□□ -0.04
PPP4R1-202ENST00000400555 TPM3P06753 285 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 SPECC1Q5M775 1068 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 ZSCAN25Q6NSZ9 544 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 PHKBQ93100 1093 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 MAST3O60307 1309 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 COL15A1P39059 1388 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 PDIA3P30101 505 aaKnown RBP14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 SCARF1Q14162 830 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 SLC9C2Q5TAH2 1124 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 KIF6Q6ZMV9 814 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 DENND2AQ9ULE3 1009 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 HMGB1P09429 215 aaKnown RBP14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 CLIC4Q9Y696 253 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 PXDNLA1KZ92 1463 aa14.78□□□□□ -0.04
PPP4R1-202ENST00000400555 STX1AQ16623 288 aa14.77□□□□□ -0.04
PPP4R1-202ENST00000400555 TMC6Q7Z403 805 aa14.77□□□□□ -0.04
PPP4R1-202ENST00000400555 FGAP02671 866 aa14.77□□□□□ -0.04
PPP4R1-202ENST00000400555 ADD1P35611 737 aaKnown RBP14.77□□□□□ -0.04
PPP4R1-202ENST00000400555 DNAJC10Q8IXB1 793 aa14.77□□□□□ -0.04
PPP4R1-202ENST00000400555 ZKSCAN3Q9BRR0 538 aa14.77□□□□□ -0.04
PPP4R1-202ENST00000400555 TMOD3Q9NYL9 352 aa14.77□□□□□ -0.04
PPP4R1-202ENST00000400555 NUP133Q8WUM0 1156 aa14.77□□□□□ -0.05
PPP4R1-202ENST00000400555 ANO10Q9NW15 660 aa14.77□□□□□ -0.05
PPP4R1-202ENST00000400555 PDILTQ8N807 584 aa14.76□□□□□ -0.05
PPP4R1-202ENST00000400555 PUS7LQ9H0K6 701 aaKnown RBP14.76□□□□□ -0.05
PPP4R1-202ENST00000400555 TRMT112Q9UI30 125 aaKnown RBP14.76□□□□□ -0.05
PPP4R1-202ENST00000400555 MED23Q9ULK4 1368 aa14.76□□□□□ -0.05
PPP4R1-202ENST00000400555 CCDC69A6NI79 296 aa14.76□□□□□ -0.05
PPP4R1-202ENST00000400555 PFKFB2O60825 505 aa14.76□□□□□ -0.05
PPP4R1-202ENST00000400555 ATG9AQ7Z3C6 839 aa14.76□□□□□ -0.05
PPP4R1-202ENST00000400555 TERF1P54274 439 aa14.76□□□□□ -0.05
PPP4R1-202ENST00000400555 CMTR1Q8N1G2 835 aaKnown RBP14.76□□□□□ -0.05
PPP4R1-202ENST00000400555 PCDHA7Q9UN72 937 aa14.76□□□□□ -0.05
PPP4R1-202ENST00000400555 CTDNEP1O95476 244 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 PTPN14Q15678 1187 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 ATP2B3Q16720 1220 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 MRPS27Q92552 414 aaKnown RBP14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 B4E1Z4 1266 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 SLC3A2P08195 630 aaKnown RBP14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 NDUFA8P51970 172 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 FOXO4P98177 505 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 TRIM29Q14134 588 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 NAT10Q9H0A0 1025 aaKnown RBP14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 CTNNA3Q9UI47 895 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 GPAA1O43292 621 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 IFNKQ9P0W0 207 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 ASAP1Q9ULH1 1129 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 MTMR7Q9Y216 660 aa14.75□□□□□ -0.05
PPP4R1-202ENST00000400555 SERPINC1P01008 464 aa14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 LRRFIP1Q32MZ4 808 aaKnown RBP14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 NWD1Q149M9 1564 aa14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 USP27XA6NNY8 438 aa14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 ZMYM1Q5SVZ6 1142 aa14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 CEP135Q66GS9 1140 aa14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 KCNB2Q92953 911 aa14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 HELLSQ9NRZ9 838 aa14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 ELP1O95163 1332 aa14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 NPHP4O75161 1426 aaPredicted RBP14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 SPTLC2O15270 562 aa14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 DHX16O60231 1041 aaKnown RBP14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 SLC4A8Q2Y0W8 1093 aa14.74□□□□□ -0.05
PPP4R1-202ENST00000400555 CPLX2Q6PUV4 134 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms