RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 C8orf58Q8NAV2 365 aa13.4□□□□□ -0.26
PUM3-202ENST00000397885 DNAJC25Q9H1X3 360 aa13.4□□□□□ -0.26
PUM3-202ENST00000397885 ZCCHC17Q9NP64 241 aaKnown RBP13.4□□□□□ -0.26
PUM3-202ENST00000397885 THRAP3Q9Y2W1 955 aaKnown RBP13.4□□□□□ -0.26
PUM3-202ENST00000397885 GOLGA6L4A6NEF3 574 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 GJB2P29033 226 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 ATP6V1AP38606 617 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 TPRNQ4KMQ1 711 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 FAM107BQ9H098 131 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 ZSCAN16Q9H4T2 348 aaPredicted RBP13.39□□□□□ -0.27
PUM3-202ENST00000397885 USP54Q70EL1 1684 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 CTAGE5O15320 804 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 FBLN1P23142 703 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 AK2P54819 239 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 ARID5BQ14865 1188 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
PUM3-202ENST00000397885 RUFY3Q7L099 469 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 STAP2Q9UGK3 403 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 COL18A1P39060 1754 aa13.39□□□□□ -0.27
PUM3-202ENST00000397885 USP31Q70CQ4 1352 aa13.38□□□□□ -0.27
PUM3-202ENST00000397885 COL5A2P05997 1499 aaPredicted RBP13.38□□□□□ -0.27
PUM3-202ENST00000397885 PDCP20941 246 aa13.38□□□□□ -0.27
PUM3-202ENST00000397885 NME9Q86XW9 330 aa13.38□□□□□ -0.27
PUM3-202ENST00000397885 LRRN4CLQ8ND94 238 aa13.38□□□□□ -0.27
PUM3-202ENST00000397885 FUT8Q9BYC5 575 aa13.38□□□□□ -0.27
PUM3-202ENST00000397885 MAP2K7O14733 419 aa13.37□□□□□ -0.27
PUM3-202ENST00000397885 SEC31AO94979 1220 aaKnown RBP13.37□□□□□ -0.27
PUM3-202ENST00000397885 MAP2K2P36507 400 aa13.37□□□□□ -0.27
PUM3-202ENST00000397885 STX1AQ16623 288 aa13.37□□□□□ -0.27
PUM3-202ENST00000397885 ARHGEF25Q86VW2 580 aa13.37□□□□□ -0.27
PUM3-202ENST00000397885 ANKRD20A12PQ8NF67 263 aa13.37□□□□□ -0.27
PUM3-202ENST00000397885 CRB1P82279 1406 aa13.37□□□□□ -0.27
PUM3-202ENST00000397885 SUFUQ9UMX1 484 aa13.36□□□□□ -0.27
PUM3-202ENST00000397885 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
PUM3-202ENST00000397885 SNX14Q9Y5W7 946 aa13.36□□□□□ -0.27
PUM3-202ENST00000397885 RGPD1P0DJD0 1748 aa13.36□□□□□ -0.27
PUM3-202ENST00000397885 A0A087WUV0 522 aaPredicted RBP13.36□□□□□ -0.27
PUM3-202ENST00000397885 CCDC151A5D8V7 595 aa13.36□□□□□ -0.27
PUM3-202ENST00000397885 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
PUM3-202ENST00000397885 USP8P40818 1118 aa13.36□□□□□ -0.27
PUM3-202ENST00000397885 CNPY4Q8N129 248 aa13.36□□□□□ -0.27
PUM3-202ENST00000397885 ABCC6O95255 1503 aa13.36□□□□□ -0.27
PUM3-202ENST00000397885 SMC2O95347 1197 aa13.35□□□□□ -0.27
PUM3-202ENST00000397885 SART3Q15020 963 aaKnown RBP13.35□□□□□ -0.27
PUM3-202ENST00000397885 BRD3Q15059 726 aa13.35□□□□□ -0.27
PUM3-202ENST00000397885 VPS53Q5VIR6 699 aa13.35□□□□□ -0.27
PUM3-202ENST00000397885 HNRNPLLQ8WVV9 542 aaKnown RBP13.35□□□□□ -0.27
PUM3-202ENST00000397885 RABGGTAQ92696 567 aa13.35□□□□□ -0.27
PUM3-202ENST00000397885 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
PUM3-202ENST00000397885 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
PUM3-202ENST00000397885 NFAT5O94916 1531 aa13.35□□□□□ -0.27
PUM3-202ENST00000397885 BECN2A8MW95 431 aa13.35□□□□□ -0.27
PUM3-202ENST00000397885 EVCP57679 992 aa13.35□□□□□ -0.27
PUM3-202ENST00000397885 HSP90AB3PQ58FF7 597 aa13.35□□□□□ -0.27
PUM3-202ENST00000397885 SPATA32Q96LK8 384 aa13.35□□□□□ -0.27
PUM3-202ENST00000397885 FAM196AQ6ZSG2 479 aa13.34□□□□□ -0.27
PUM3-202ENST00000397885 MPHOSPH8Q99549 860 aa13.34□□□□□ -0.27
PUM3-202ENST00000397885 VPS37CA5D8V6 355 aaPredicted RBP13.34□□□□□ -0.27
PUM3-202ENST00000397885 APBB1O00213 710 aa13.34□□□□□ -0.27
PUM3-202ENST00000397885 BAG6P46379 1132 aa13.34□□□□□ -0.27
PUM3-202ENST00000397885 TDO2P48775 406 aa13.34□□□□□ -0.27
PUM3-202ENST00000397885 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
PUM3-202ENST00000397885 RRS1Q15050 365 aaKnown RBP13.34□□□□□ -0.27
PUM3-202ENST00000397885 RSRC2Q7L4I2 434 aaKnown RBP13.34□□□□□ -0.27
PUM3-202ENST00000397885 TADA2BQ86TJ2 420 aa13.34□□□□□ -0.27
PUM3-202ENST00000397885 HOMER1Q86YM7 354 aa13.34□□□□□ -0.27
PUM3-202ENST00000397885 EGFL6Q8IUX8 553 aa13.34□□□□□ -0.27
PUM3-202ENST00000397885 TM6SF1Q9BZW5 370 aa13.34□□□□□ -0.27
PUM3-202ENST00000397885 LRRCC1Q9C099 1032 aa13.34□□□□□ -0.27
PUM3-202ENST00000397885 PARP4Q9UKK3 1724 aaKnown RBP13.34□□□□□ -0.27
PUM3-202ENST00000397885 WDR17Q8IZU2 1322 aa13.33□□□□□ -0.27
PUM3-202ENST00000397885 RGPD5Q99666 1765 aa13.33□□□□□ -0.27
PUM3-202ENST00000397885 SRGAP3O43295 1099 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 EIF3JO75822 258 aaKnown RBP13.33□□□□□ -0.28
PUM3-202ENST00000397885 GNAI3P08754 354 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 LEO1Q8WVC0 666 aaPredicted RBP13.33□□□□□ -0.28
PUM3-202ENST00000397885 RILPL2Q969X0 211 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 CCDC34Q96HJ3 373 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 UTP14AQ9BVJ6 771 aaKnown RBP13.33□□□□□ -0.28
PUM3-202ENST00000397885 ANO10Q9NW15 660 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 AXIN2Q9Y2T1 843 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 NR1I2O75469 434 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 SFPQP23246 707 aaKnown RBP eCLIP13.33□□□□□ -0.28
PUM3-202ENST00000397885 TUBB4BP68371 445 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 GRIPAP1Q4V328 841 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 LARP1BQ659C4 914 aaKnown RBP13.33□□□□□ -0.28
PUM3-202ENST00000397885 FCHSD1Q86WN1 690 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 CARD6Q9BX69 1037 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 NAT10Q9H0A0 1025 aaKnown RBP13.33□□□□□ -0.28
PUM3-202ENST00000397885 RAI14Q9P0K7 980 aa13.33□□□□□ -0.28
PUM3-202ENST00000397885 H3BQF6 201 aa13.32□□□□□ -0.28
PUM3-202ENST00000397885 CALRP27797 417 aaKnown RBP13.32□□□□□ -0.28
PUM3-202ENST00000397885 APOBRQ0VD83 1088 aa13.32□□□□□ -0.28
PUM3-202ENST00000397885 DCTN1Q14203 1278 aa13.32□□□□□ -0.28
PUM3-202ENST00000397885 NBPF20Q3BBV1 942 aa13.32□□□□□ -0.28
PUM3-202ENST00000397885 TRIM65Q6PJ69 517 aa13.32□□□□□ -0.28
PUM3-202ENST00000397885 DEFB132Q7Z7B7 95 aa13.32□□□□□ -0.28
PUM3-202ENST00000397885 ERC1Q8IUD2 1116 aa13.32□□□□□ -0.28
PUM3-202ENST00000397885 CCDC83Q8IWF9 413 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms