RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 GYG1P46976 350 aa25.81■■□□□ 1.72
CPNE1-204ENST00000397443 BACH2Q9BYV9 841 aa25.81■■□□□ 1.72
CPNE1-204ENST00000397443 ATP6V0A2Q9Y487 856 aa25.8■■□□□ 1.72
CPNE1-204ENST00000397443 SCARF1Q14162 830 aa25.8■■□□□ 1.72
CPNE1-204ENST00000397443 SP8Q8IXZ3 490 aa25.8■■□□□ 1.72
CPNE1-204ENST00000397443 CNTROBQ8N137 903 aa25.8■■□□□ 1.72
CPNE1-204ENST00000397443 UFL1O94874 794 aa25.79■■□□□ 1.72
CPNE1-204ENST00000397443 FKBP4Q02790 459 aaKnown RBP eCLIP25.79■■□□□ 1.72
CPNE1-204ENST00000397443 PI16Q6UXB8 463 aa25.79■■□□□ 1.72
CPNE1-204ENST00000397443 TMC4Q7Z404 712 aa25.79■■□□□ 1.72
CPNE1-204ENST00000397443 CNKSR1Q969H4 720 aa25.79■■□□□ 1.72
CPNE1-204ENST00000397443 ARAP2Q8WZ64 1704 aa25.79■■□□□ 1.72
CPNE1-204ENST00000397443 SLX4Q8IY92 1834 aa25.79■■□□□ 1.72
CPNE1-204ENST00000397443 CDC45O75419 566 aa25.78■■□□□ 1.72
CPNE1-204ENST00000397443 TMX4Q9H1E5 349 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-204ENST00000397443 IQSEC3Q9UPP2 1182 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-204ENST00000397443 AK9Q5TCS8 1911 aa25.78■■□□□ 1.72
CPNE1-204ENST00000397443 TBC1D9Q6ZT07 1266 aa25.78■■□□□ 1.72
CPNE1-204ENST00000397443 VPS37DQ86XT2 251 aa25.78■■□□□ 1.72
CPNE1-204ENST00000397443 HAUS7Q99871 368 aa25.78■■□□□ 1.72
CPNE1-204ENST00000397443 GOLIM4O00461 696 aa25.77■■□□□ 1.72
CPNE1-204ENST00000397443 TXNRD3Q86VQ6 643 aa25.77■■□□□ 1.72
CPNE1-204ENST00000397443 GGA1Q9UJY5 639 aa25.77■■□□□ 1.72
CPNE1-204ENST00000397443 MCAMP43121 646 aa25.76■■□□□ 1.72
CPNE1-204ENST00000397443 CAVIN4Q5BKX8 364 aa25.76■■□□□ 1.72
CPNE1-204ENST00000397443 SPON1Q9HCB6 807 aa25.76■■□□□ 1.72
CPNE1-204ENST00000397443 LEMD3Q9Y2U8 911 aa25.76■■□□□ 1.72
CPNE1-204ENST00000397443 KIF13BQ9NQT8 1826 aa25.76■■□□□ 1.71
CPNE1-204ENST00000397443 C6orf229H3BNL8 230 aa25.76■■□□□ 1.71
CPNE1-204ENST00000397443 SEC24BO95487 1268 aa25.75■■□□□ 1.71
CPNE1-204ENST00000397443 KCNA3P22001 575 aa25.75■■□□□ 1.71
CPNE1-204ENST00000397443 EVI5LQ96CN4 794 aa25.75■■□□□ 1.71
CPNE1-204ENST00000397443 FAM84BQ96KN1 310 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-204ENST00000397443 PAG1Q9NWQ8 432 aa25.75■■□□□ 1.71
CPNE1-204ENST00000397443 POLLQ9UGP5 575 aa25.75■■□□□ 1.71
CPNE1-204ENST00000397443 LRRC37AA6NMS7 1700 aa25.75■■□□□ 1.71
CPNE1-204ENST00000397443 ZAP70P43403 619 aa25.75■■□□□ 1.71
CPNE1-204ENST00000397443 MPNDQ8N594 471 aa25.75■■□□□ 1.71
CPNE1-204ENST00000397443 TTLL6Q8N841 843 aa25.75■■□□□ 1.71
CPNE1-204ENST00000397443 FSD1Q9BTV5 496 aa25.75■■□□□ 1.71
CPNE1-204ENST00000397443 SRCAPQ6ZRS2 3230 aa25.74■■□□□ 1.71
CPNE1-204ENST00000397443 UQCRFS1P1P0C7P4 283 aa25.74■■□□□ 1.71
CPNE1-204ENST00000397443 ATP2B4P23634 1241 aa25.74■■□□□ 1.71
CPNE1-204ENST00000397443 TBC1D16Q8TBP0 767 aa25.74■■□□□ 1.71
CPNE1-204ENST00000397443 ANTXR1Q9H6X2 564 aa25.74■■□□□ 1.71
CPNE1-204ENST00000397443 ARID4AP29374 1257 aaPredicted RBP25.73■■□□□ 1.71
CPNE1-204ENST00000397443 RASGRF1Q13972 1273 aa25.73■■□□□ 1.71
CPNE1-204ENST00000397443 DPP8Q6V1X1 898 aaPredicted RBP25.73■■□□□ 1.71
CPNE1-204ENST00000397443 PODXL2Q9NZ53 605 aa25.73■■□□□ 1.71
CPNE1-204ENST00000397443 C21orf2O43822 256 aa25.73■■□□□ 1.71
CPNE1-204ENST00000397443 TGFB2P61812 414 aa25.73■■□□□ 1.71
CPNE1-204ENST00000397443 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.73■■□□□ 1.71
CPNE1-204ENST00000397443 DLEC1Q9Y238 1755 aa25.72■■□□□ 1.71
CPNE1-204ENST00000397443 CASC1Q6TDU7 716 aa25.72■■□□□ 1.71
CPNE1-204ENST00000397443 TSHZ2Q9NRE2 1034 aa25.72■■□□□ 1.71
CPNE1-204ENST00000397443 FRAT2O75474 233 aaPredicted RBP25.71■■□□□ 1.71
CPNE1-204ENST00000397443 HIBADHP31937 336 aaKnown RBP25.71■■□□□ 1.71
CPNE1-204ENST00000397443 ZNF512BQ96KM6 892 aaPredicted RBP25.71■■□□□ 1.71
CPNE1-204ENST00000397443 GNL3LQ9NVN8 582 aaKnown RBP25.71■■□□□ 1.71
CPNE1-204ENST00000397443 HMG20BQ9P0W2 317 aa25.71■■□□□ 1.71
CPNE1-204ENST00000397443 RIMBP2O15034 1052 aa25.71■■□□□ 1.71
CPNE1-204ENST00000397443 CHMLP26374 656 aa25.71■■□□□ 1.71
CPNE1-204ENST00000397443 MFAP1P55081 439 aaKnown RBP25.71■■□□□ 1.71
CPNE1-204ENST00000397443 SPATA5Q8NB90 893 aa25.71■■□□□ 1.71
CPNE1-204ENST00000397443 AKAP11Q9UKA4 1901 aa25.7■■□□□ 1.71
CPNE1-204ENST00000397443 FBXO33Q7Z6M2 555 aa25.7■■□□□ 1.7
CPNE1-204ENST00000397443 PIM2Q9P1W9 311 aa25.7■■□□□ 1.7
CPNE1-204ENST00000397443 CD2APQ9Y5K6 639 aa25.69■■□□□ 1.7
CPNE1-204ENST00000397443 IRS2Q9Y4H2 1338 aa25.69■■□□□ 1.7
CPNE1-204ENST00000397443 CHGBP05060 677 aa25.69■■□□□ 1.7
CPNE1-204ENST00000397443 C7orf43Q8WVR3 580 aa25.69■■□□□ 1.7
CPNE1-204ENST00000397443 DIAPH3Q9NSV4 1193 aa25.69■■□□□ 1.7
CPNE1-204ENST00000397443 LTBP1Q14766 1721 aa25.68■■□□□ 1.7
CPNE1-204ENST00000397443 KIAA1551Q9HCM1 1747 aa25.68■■□□□ 1.7
CPNE1-204ENST00000397443 CYP2E1P05181 493 aaPredicted RBP25.68■■□□□ 1.7
CPNE1-204ENST00000397443 JAG2Q9Y219 1238 aa25.68■■□□□ 1.7
CPNE1-204ENST00000397443 CWC27Q6UX04 472 aaKnown RBP25.67■■□□□ 1.7
CPNE1-204ENST00000397443 KBTBD3Q8NAB2 608 aa25.67■■□□□ 1.7
CPNE1-204ENST00000397443 NLGN2Q8NFZ4 835 aa25.67■■□□□ 1.7
CPNE1-204ENST00000397443 DUOX1Q9NRD9 1551 aa25.67■■□□□ 1.7
CPNE1-204ENST00000397443 ZNF804AQ7Z570 1209 aa25.67■■□□□ 1.7
CPNE1-204ENST00000397443 CHAF1AQ13111 956 aaPredicted RBP25.65■■□□□ 1.7
CPNE1-204ENST00000397443 SLFNL1Q499Z3 407 aa25.65■■□□□ 1.7
CPNE1-204ENST00000397443 PIH1D3Q9NQM4 214 aaKnown RBP25.65■■□□□ 1.7
CPNE1-204ENST00000397443 DALRD3Q5D0E6 543 aaKnown RBP25.65■■□□□ 1.7
CPNE1-204ENST00000397443 ZC3H12CQ9C0D7 883 aaKnown RBP25.65■■□□□ 1.7
CPNE1-204ENST00000397443 COL1A1P02452 1464 aaPredicted RBP25.64■■□□□ 1.7
CPNE1-204ENST00000397443 IDH1O75874 414 aaKnown RBP25.64■■□□□ 1.69
CPNE1-204ENST00000397443 WASHC4Q2M389 1173 aa25.64■■□□□ 1.69
CPNE1-204ENST00000397443 FAM227BQ96M60 508 aa25.64■■□□□ 1.69
CPNE1-204ENST00000397443 MED23Q9ULK4 1368 aa25.64■■□□□ 1.69
CPNE1-204ENST00000397443 NMIQ13287 307 aaPredicted RBP25.63■■□□□ 1.69
CPNE1-204ENST00000397443 C15orf52Q6ZUT6 534 aaKnown RBP25.63■■□□□ 1.69
CPNE1-204ENST00000397443 ESYT1Q9BSJ8 1104 aa25.63■■□□□ 1.69
CPNE1-204ENST00000397443 IL25Q9H293 177 aa25.63■■□□□ 1.69
CPNE1-204ENST00000397443 DENND2AQ9ULE3 1009 aa25.63■■□□□ 1.69
CPNE1-204ENST00000397443 MYO5AQ9Y4I1 1855 aaKnown RBP25.63■■□□□ 1.69
CPNE1-204ENST00000397443 ABCF2Q9UG63 623 aa25.63■■□□□ 1.69
CPNE1-204ENST00000397443 BCS1LQ9Y276 419 aa25.63■■□□□ 1.69
CPNE1-204ENST00000397443 MYH13Q9UKX3 1938 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms