RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 MPNDQ8N594 471 aa28.76■■■□□ 2.19
TSPAN4-202ENST00000397396 PI4K2BQ8TCG2 481 aa28.76■■■□□ 2.19
TSPAN4-202ENST00000397396 ZNF512BQ96KM6 892 aaPredicted RBP28.76■■■□□ 2.19
TSPAN4-202ENST00000397396 CACNA1SQ13698 1873 aa28.76■■■□□ 2.19
TSPAN4-202ENST00000397396 C15orf52Q6ZUT6 534 aaKnown RBP28.75■■■□□ 2.19
TSPAN4-202ENST00000397396 UFL1O94874 794 aa28.74■■■□□ 2.19
TSPAN4-202ENST00000397396 ADORA1P30542 326 aa28.74■■■□□ 2.19
TSPAN4-202ENST00000397396 DPP8Q6V1X1 898 aaPredicted RBP28.74■■■□□ 2.19
TSPAN4-202ENST00000397396 GNL3LQ9NVN8 582 aaKnown RBP28.74■■■□□ 2.19
TSPAN4-202ENST00000397396 SLX4Q8IY92 1834 aa28.74■■■□□ 2.19
TSPAN4-202ENST00000397396 LTBP1Q14766 1721 aa28.73■■■□□ 2.19
TSPAN4-202ENST00000397396 DALRD3Q5D0E6 543 aaKnown RBP28.73■■■□□ 2.19
TSPAN4-202ENST00000397396 CCDC93Q567U6 631 aa28.72■■■□□ 2.19
TSPAN4-202ENST00000397396 TSHZ3Q63HK5 1081 aa28.72■■■□□ 2.19
TSPAN4-202ENST00000397396 CCDC102BQ68D86 513 aa28.72■■■□□ 2.19
TSPAN4-202ENST00000397396 VPS37DQ86XT2 251 aa28.72■■■□□ 2.19
TSPAN4-202ENST00000397396 C7orf43Q8WVR3 580 aa28.72■■■□□ 2.19
TSPAN4-202ENST00000397396 EYA3Q99504 573 aa28.72■■■□□ 2.19
TSPAN4-202ENST00000397396 MED23Q9ULK4 1368 aa28.72■■■□□ 2.19
TSPAN4-202ENST00000397396 ZBTB22O15209 634 aa28.71■■■□□ 2.19
TSPAN4-202ENST00000397396 RTKN2Q8IZC4 609 aa28.71■■■□□ 2.19
TSPAN4-202ENST00000397396 SUPT20HQ8NEM7 779 aa28.71■■■□□ 2.19
TSPAN4-202ENST00000397396 TBC1D16Q8TBP0 767 aa28.71■■■□□ 2.19
TSPAN4-202ENST00000397396 ARID4AP29374 1257 aaPredicted RBP28.7■■■□□ 2.19
TSPAN4-202ENST00000397396 CNTROBQ8N137 903 aa28.7■■■□□ 2.19
TSPAN4-202ENST00000397396 BRCA1P38398 1863 aaKnown RBP28.7■■■□□ 2.18
TSPAN4-202ENST00000397396 C6orf229H3BNL8 230 aa28.69■■■□□ 2.18
TSPAN4-202ENST00000397396 GSPT1P15170 499 aaKnown RBP28.69■■■□□ 2.18
TSPAN4-202ENST00000397396 ZNF804AQ7Z570 1209 aa28.69■■■□□ 2.18
TSPAN4-202ENST00000397396 SNAP23O00161 211 aa28.69■■■□□ 2.18
TSPAN4-202ENST00000397396 SEMA3EO15041 775 aa28.69■■■□□ 2.18
TSPAN4-202ENST00000397396 HAUS7Q99871 368 aa28.69■■■□□ 2.18
TSPAN4-202ENST00000397396 HIBADHP31937 336 aaKnown RBP28.68■■■□□ 2.18
TSPAN4-202ENST00000397396 RTFDC1Q9BY42 306 aaPredicted RBP28.68■■■□□ 2.18
TSPAN4-202ENST00000397396 BOLA2Q9H3K6 86 aa28.68■■■□□ 2.18
TSPAN4-202ENST00000397396 DUOX1Q9NRD9 1551 aa28.67■■■□□ 2.18
TSPAN4-202ENST00000397396 TRIM6-TRIM34B2RNG4 842 aa28.67■■■□□ 2.18
TSPAN4-202ENST00000397396 C21orf2O43822 256 aa28.67■■■□□ 2.18
TSPAN4-202ENST00000397396 PHKA1P46020 1223 aa28.67■■■□□ 2.18
TSPAN4-202ENST00000397396 FBXO33Q7Z6M2 555 aa28.67■■■□□ 2.18
TSPAN4-202ENST00000397396 FAM84BQ96KN1 310 aaPredicted RBP28.67■■■□□ 2.18
TSPAN4-202ENST00000397396 POLLQ9UGP5 575 aa28.67■■■□□ 2.18
TSPAN4-202ENST00000397396 IRS2Q9Y4H2 1338 aa28.66■■■□□ 2.18
TSPAN4-202ENST00000397396 BCAMP50895 628 aa28.66■■■□□ 2.18
TSPAN4-202ENST00000397396 TICAM2Q86XR7 235 aa28.66■■■□□ 2.18
TSPAN4-202ENST00000397396 EVI5LQ96CN4 794 aa28.66■■■□□ 2.18
TSPAN4-202ENST00000397396 FHDC1Q9C0D6 1143 aaPredicted RBP28.66■■■□□ 2.18
TSPAN4-202ENST00000397396 SNED1Q8TER0 1413 aa28.65■■■□□ 2.18
TSPAN4-202ENST00000397396 SDSP20132 328 aa28.65■■■□□ 2.18
TSPAN4-202ENST00000397396 GYG1P46976 350 aa28.65■■■□□ 2.18
TSPAN4-202ENST00000397396 PSMD1Q99460 953 aa28.65■■■□□ 2.18
TSPAN4-202ENST00000397396 ZC3H12CQ9C0D7 883 aaKnown RBP28.65■■■□□ 2.18
TSPAN4-202ENST00000397396 ZNF219Q9P2Y4 722 aaPredicted RBP28.65■■■□□ 2.18
TSPAN4-202ENST00000397396 PDS5AQ29RF7 1337 aaKnown RBP28.64■■■□□ 2.18
TSPAN4-202ENST00000397396 DNAJC2Q99543 621 aaKnown RBP28.64■■■□□ 2.17
TSPAN4-202ENST00000397396 DENND2AQ9ULE3 1009 aa28.64■■■□□ 2.17
TSPAN4-202ENST00000397396 TTF1Q15361 905 aaPredicted RBP28.63■■■□□ 2.17
TSPAN4-202ENST00000397396 CASC1Q6TDU7 716 aa28.63■■■□□ 2.17
TSPAN4-202ENST00000397396 OLFM4Q6UX06 510 aa28.63■■■□□ 2.17
TSPAN4-202ENST00000397396 SLC51AQ86UW1 340 aa28.63■■■□□ 2.17
TSPAN4-202ENST00000397396 NLGN2Q8NFZ4 835 aa28.63■■■□□ 2.17
TSPAN4-202ENST00000397396 RILPL2Q969X0 211 aa28.63■■■□□ 2.17
TSPAN4-202ENST00000397396 VPS33BQ9H267 617 aa28.63■■■□□ 2.17
TSPAN4-202ENST00000397396 RFX7Q2KHR2 1363 aa28.62■■■□□ 2.17
TSPAN4-202ENST00000397396 EIF5BO60841 1220 aaKnown RBP28.62■■■□□ 2.17
TSPAN4-202ENST00000397396 KLRK1P26718 216 aa28.62■■■□□ 2.17
TSPAN4-202ENST00000397396 WASHC4Q2M389 1173 aa28.62■■■□□ 2.17
TSPAN4-202ENST00000397396 LRRFIP1Q32MZ4 808 aaKnown RBP28.62■■■□□ 2.17
TSPAN4-202ENST00000397396 COA1Q9GZY4 146 aa28.62■■■□□ 2.17
TSPAN4-202ENST00000397396 PAG1Q9NWQ8 432 aa28.62■■■□□ 2.17
TSPAN4-202ENST00000397396 BCS1LQ9Y276 419 aa28.62■■■□□ 2.17
TSPAN4-202ENST00000397396 CDC45O75419 566 aa28.61■■■□□ 2.17
TSPAN4-202ENST00000397396 FRAT2O75474 233 aaPredicted RBP28.61■■■□□ 2.17
TSPAN4-202ENST00000397396 MCAMP43121 646 aa28.61■■■□□ 2.17
TSPAN4-202ENST00000397396 SPATA5Q8NB90 893 aa28.61■■■□□ 2.17
TSPAN4-202ENST00000397396 WTIPA6NIX2 430 aaPredicted RBP28.6■■■□□ 2.17
TSPAN4-202ENST00000397396 FKBP4Q02790 459 aaKnown RBP eCLIP28.6■■■□□ 2.171e-6■■■■□ 24.5
TSPAN4-202ENST00000397396 RASGRF1Q13972 1273 aa28.6■■■□□ 2.17
TSPAN4-202ENST00000397396 SYT17Q9BSW7 474 aa28.6■■■□□ 2.17
TSPAN4-202ENST00000397396 HIP1O00291 1037 aa28.59■■■□□ 2.17
TSPAN4-202ENST00000397396 TXNRD3Q86VQ6 643 aa28.59■■■□□ 2.17
TSPAN4-202ENST00000397396 HMG20BQ9P0W2 317 aa28.59■■■□□ 2.17
TSPAN4-202ENST00000397396 ARFGEF1Q9Y6D6 1849 aa28.58■■■□□ 2.17
TSPAN4-202ENST00000397396 G3V3G9 751 aa28.58■■■□□ 2.17
TSPAN4-202ENST00000397396 DCAF8Q5TAQ9 597 aa28.58■■■□□ 2.17
TSPAN4-202ENST00000397396 GOLIM4O00461 696 aa28.57■■■□□ 2.16
TSPAN4-202ENST00000397396 IGSF3O75054 1194 aa28.57■■■□□ 2.16
TSPAN4-202ENST00000397396 MAP4K4O95819 1239 aaPredicted RBP28.57■■■□□ 2.16
TSPAN4-202ENST00000397396 IL1R1P14778 569 aa28.57■■■□□ 2.16
TSPAN4-202ENST00000397396 ZAP70P43403 619 aa28.57■■■□□ 2.16
TSPAN4-202ENST00000397396 SCARF1Q14162 830 aa28.57■■■□□ 2.16
TSPAN4-202ENST00000397396 TDRD7Q8NHU6 1098 aaKnown RBP28.57■■■□□ 2.16
TSPAN4-202ENST00000397396 FSD1Q9BTV5 496 aa28.57■■■□□ 2.16
TSPAN4-202ENST00000397396 CD209Q9NNX6 404 aa28.57■■■□□ 2.16
TSPAN4-202ENST00000397396 AK9Q5TCS8 1911 aa28.57■■■□□ 2.16
TSPAN4-202ENST00000397396 KIAA2012Q0VF49 1180 aa28.56■■■□□ 2.16
TSPAN4-202ENST00000397396 KBTBD3Q8NAB2 608 aa28.56■■■□□ 2.16
TSPAN4-202ENST00000397396 GPR101Q96P66 508 aaPredicted RBP28.56■■■□□ 2.16
TSPAN4-202ENST00000397396 AKAP11Q9UKA4 1901 aa28.56■■■□□ 2.16
TSPAN4-202ENST00000397396 SRCAPQ6ZRS2 3230 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms