RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 IGHDP01880 384 aa21.84■■□□□ 1.09
TNFSF13-205ENST00000396545 VIL1P09327 827 aaKnown RBP21.84■■□□□ 1.09
TNFSF13-205ENST00000396545 KSR2Q6VAB6 950 aa21.84■■□□□ 1.09
TNFSF13-205ENST00000396545 USP48Q86UV5 1035 aa21.84■■□□□ 1.09
TNFSF13-205ENST00000396545 CCDC85AQ96PX6 553 aaPredicted RBP21.84■■□□□ 1.09
TNFSF13-205ENST00000396545 STK31Q9BXU1 1019 aa21.84■■□□□ 1.09
TNFSF13-205ENST00000396545 PI4KAP2A4QPH2 592 aa21.83■■□□□ 1.09
TNFSF13-205ENST00000396545 IGKV5-2P06315 115 aa21.83■■□□□ 1.09
TNFSF13-205ENST00000396545 PI4KAP1Q8N8J0 262 aa21.83■■□□□ 1.09
TNFSF13-205ENST00000396545 CHMP4BQ9H444 224 aaKnown RBP21.83■■□□□ 1.09
TNFSF13-205ENST00000396545 DLK2Q6UY11 383 aa21.82■■□□□ 1.08
TNFSF13-205ENST00000396545 KRT26Q7Z3Y9 468 aa21.82■■□□□ 1.08
TNFSF13-205ENST00000396545 DDX19BQ9UMR2 479 aa21.82■■□□□ 1.08
TNFSF13-205ENST00000396545 ZNF609O15014 1411 aa21.82■■□□□ 1.08
TNFSF13-205ENST00000396545 XDHP47989 1333 aa21.82■■□□□ 1.08
TNFSF13-205ENST00000396545 CTSWP56202 376 aa21.82■■□□□ 1.08
TNFSF13-205ENST00000396545 ANKRD18AQ8IVF6 992 aa21.82■■□□□ 1.08
TNFSF13-205ENST00000396545 PCDHB15Q9Y5E8 787 aa21.82■■□□□ 1.08
TNFSF13-205ENST00000396545 KIF4BQ2VIQ3 1234 aa21.8■■□□□ 1.08
TNFSF13-205ENST00000396545 RBM26Q5T8P6 1007 aaKnown RBP21.8■■□□□ 1.08
TNFSF13-205ENST00000396545 TMEM57Q8N5G2 664 aa21.8■■□□□ 1.08
TNFSF13-205ENST00000396545 PSME4Q14997 1843 aa21.8■■□□□ 1.08
TNFSF13-205ENST00000396545 POLR2AP24928 1970 aaKnown RBP21.79■■□□□ 1.08
TNFSF13-205ENST00000396545 G3V3G9 751 aa21.79■■□□□ 1.08
TNFSF13-205ENST00000396545 DCAF8Q5TAQ9 597 aa21.79■■□□□ 1.08
TNFSF13-205ENST00000396545 DCPSQ96C86 337 aaKnown RBP21.79■■□□□ 1.08
TNFSF13-205ENST00000396545 CDC5LQ99459 802 aaKnown RBP21.79■■□□□ 1.08
TNFSF13-205ENST00000396545 CACNA1FO60840 1977 aa21.79■■□□□ 1.08
TNFSF13-205ENST00000396545 MYH3P11055 1940 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 SLC4A2P04920 1241 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 HUNKP57058 714 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 ZNF280AP59817 542 aaPredicted RBP21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 NEXNQ0ZGT2 675 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 CWF19L2Q2TBE0 894 aaKnown RBP21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 TTLL11Q8NHH1 800 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 NEURL1BA8MQ27 555 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 ADM5C9JUS6 153 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 CA12O43570 354 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 RSBN1LQ6PCB5 846 aaPredicted RBP21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 G2E3Q7L622 706 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 SKAP1Q86WV1 359 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 AGBL3Q8NEM8 1001 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 TSKSQ9UJT2 592 aa21.78■■□□□ 1.08
TNFSF13-205ENST00000396545 ATP2B4P23634 1241 aa21.77■■□□□ 1.08
TNFSF13-205ENST00000396545 NOGQ13253 232 aa21.77■■□□□ 1.08
TNFSF13-205ENST00000396545 ITPRIPQ8IWB1 547 aa21.77■■□□□ 1.08
TNFSF13-205ENST00000396545 ABHD8Q96I13 439 aa21.77■■□□□ 1.08
TNFSF13-205ENST00000396545 GREM2Q9H772 168 aa21.77■■□□□ 1.08
TNFSF13-205ENST00000396545 GGA3Q9NZ52 723 aa21.77■■□□□ 1.08
TNFSF13-205ENST00000396545 GMLQ99445 158 aa21.76■■□□□ 1.07
TNFSF13-205ENST00000396545 GBA2Q9HCG7 927 aaPredicted RBP21.76■■□□□ 1.07
TNFSF13-205ENST00000396545 BSDC1Q9NW68 430 aaPredicted RBP21.76■■□□□ 1.07
TNFSF13-205ENST00000396545 ASTN2O75129 1339 aaPredicted RBP21.76■■□□□ 1.07
TNFSF13-205ENST00000396545 ZIC5Q96T25 663 aa21.75■■□□□ 1.07
TNFSF13-205ENST00000396545 ZBTB40Q9NUA8 1239 aa21.75■■□□□ 1.07
TNFSF13-205ENST00000396545 MINPP1Q9UNW1 487 aa21.75■■□□□ 1.07
TNFSF13-205ENST00000396545 MED23Q9ULK4 1368 aa21.75■■□□□ 1.07
TNFSF13-205ENST00000396545 SPEF2Q9C093 1822 aa21.75■■□□□ 1.07
TNFSF13-205ENST00000396545 WTIPA6NIX2 430 aaPredicted RBP21.74■■□□□ 1.07
TNFSF13-205ENST00000396545 H7C1W4 665 aa21.74■■□□□ 1.07
TNFSF13-205ENST00000396545 PDE4AP27815 886 aa21.74■■□□□ 1.07
TNFSF13-205ENST00000396545 UBE3BQ7Z3V4 1068 aa21.74■■□□□ 1.07
TNFSF13-205ENST00000396545 PODNQ7Z5L7 613 aa21.74■■□□□ 1.07
TNFSF13-205ENST00000396545 SULF1Q8IWU6 871 aa21.74■■□□□ 1.07
TNFSF13-205ENST00000396545 BACH2Q9BYV9 841 aa21.74■■□□□ 1.07
TNFSF13-205ENST00000396545 RWDD1Q9H446 243 aaPredicted RBP21.74■■□□□ 1.07
TNFSF13-205ENST00000396545 C2orf69Q8N8R5 385 aa21.74■■□□□ 1.07
TNFSF13-205ENST00000396545 USP17L3A6NCW0 530 aa21.73■■□□□ 1.07
TNFSF13-205ENST00000396545 USP17L4A6NCW7 530 aa21.73■■□□□ 1.07
TNFSF13-205ENST00000396545 FAM155AB1AL88 458 aaPredicted RBP21.73■■□□□ 1.07
TNFSF13-205ENST00000396545 FLIIQ13045 1269 aa21.73■■□□□ 1.07
TNFSF13-205ENST00000396545 RGMBQ6NW40 437 aa21.73■■□□□ 1.07
TNFSF13-205ENST00000396545 USP17L1Q7RTZ2 530 aa21.73■■□□□ 1.07
TNFSF13-205ENST00000396545 USP17L8P0C7I0 530 aa21.72■■□□□ 1.07
TNFSF13-205ENST00000396545 HDAC1Q13547 482 aaPredicted RBP21.72■■□□□ 1.07
TNFSF13-205ENST00000396545 SCARF1Q14162 830 aa21.72■■□□□ 1.07
TNFSF13-205ENST00000396545 GCKRQ14397 625 aa21.72■■□□□ 1.07
TNFSF13-205ENST00000396545 PLA2G12BQ9BX93 195 aa21.72■■□□□ 1.07
TNFSF13-205ENST00000396545 ANGEL2Q5VTE6 544 aaKnown RBP21.71■■□□□ 1.07
TNFSF13-205ENST00000396545 INTS3Q68E01 1043 aaKnown RBP21.71■■□□□ 1.07
TNFSF13-205ENST00000396545 ZNF646O15015 1829 aaPredicted RBP21.71■■□□□ 1.07
TNFSF13-205ENST00000396545 CCT4P50991 539 aaKnown RBP21.7■■□□□ 1.06
TNFSF13-205ENST00000396545 CASP7P55210 303 aa21.7■■□□□ 1.06
TNFSF13-205ENST00000396545 CDCA5Q96FF9 252 aa21.7■■□□□ 1.06
TNFSF13-205ENST00000396545 MYOZ2Q9NPC6 264 aa21.7■■□□□ 1.06
TNFSF13-205ENST00000396545 DNAAF4Q8WXU2 420 aa21.7■■□□□ 1.06
TNFSF13-205ENST00000396545 CCDC102AQ96A19 550 aa21.7■■□□□ 1.06
TNFSF13-205ENST00000396545 FKBP5Q13451 457 aaPredicted RBP21.69■■□□□ 1.06
TNFSF13-205ENST00000396545 PITPNM2Q9BZ72 1349 aa21.69■■□□□ 1.06
TNFSF13-205ENST00000396545 ZBTB7BO15156 539 aaPredicted RBP21.68■■□□□ 1.06
TNFSF13-205ENST00000396545 ITGA6P23229 1130 aa21.68■■□□□ 1.06
TNFSF13-205ENST00000396545 IGHMBP2P38935 993 aaKnown RBP21.68■■□□□ 1.06
TNFSF13-205ENST00000396545 ZNF157P51786 506 aaPredicted RBP21.68■■□□□ 1.06
TNFSF13-205ENST00000396545 FAM161AQ3B820 660 aa21.68■■□□□ 1.06
TNFSF13-205ENST00000396545 DACT2Q5SW24 774 aa21.68■■□□□ 1.06
TNFSF13-205ENST00000396545 LINS1Q8NG48 757 aa21.68■■□□□ 1.06
TNFSF13-205ENST00000396545 LEMD3Q9Y2U8 911 aa21.68■■□□□ 1.06
TNFSF13-205ENST00000396545 CASP8AP2Q9UKL3 1982 aa21.68■■□□□ 1.06
TNFSF13-205ENST00000396545 CSF1RP07333 972 aa21.67■■□□□ 1.06
TNFSF13-205ENST00000396545 TXNRD3Q86VQ6 643 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms