RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ESPNB1AK53 854 aa19.9■□□□□ 0.78
NUP50-202ENST00000396096 PFKFB2O60825 505 aa19.9■□□□□ 0.78
NUP50-202ENST00000396096 FKBP4Q02790 459 aaKnown RBP eCLIP19.9■□□□□ 0.78
NUP50-202ENST00000396096 METTL24Q5JXM2 366 aa19.9■□□□□ 0.78
NUP50-202ENST00000396096 LDHAL6AQ6ZMR3 332 aa19.9■□□□□ 0.78
NUP50-202ENST00000396096 CDC37L1Q7L3B6 337 aa19.9■□□□□ 0.78
NUP50-202ENST00000396096 SYTL4Q96C24 671 aaPredicted RBP19.9■□□□□ 0.78
NUP50-202ENST00000396096 TRMT112Q9UI30 125 aaKnown RBP19.9■□□□□ 0.78
NUP50-202ENST00000396096 ELP1O95163 1332 aa19.89■□□□□ 0.77
NUP50-202ENST00000396096 EIF5P55010 431 aaKnown RBP19.89■□□□□ 0.77
NUP50-202ENST00000396096 FBXL16Q8N461 479 aa19.89■□□□□ 0.77
NUP50-202ENST00000396096 SLIT2O94813 1529 aa19.89■□□□□ 0.77
NUP50-202ENST00000396096 UBN2Q6ZU65 1347 aa19.89■□□□□ 0.77
NUP50-202ENST00000396096 E7EWF7 191 aa19.88■□□□□ 0.77
NUP50-202ENST00000396096 KRT85P78386 507 aa19.88■□□□□ 0.77
NUP50-202ENST00000396096 STK3Q13188 491 aa19.88■□□□□ 0.77
NUP50-202ENST00000396096 SCARF1Q14162 830 aa19.88■□□□□ 0.77
NUP50-202ENST00000396096 SMARCC2Q8TAQ2 1214 aa19.88■□□□□ 0.77
NUP50-202ENST00000396096 DTNBO60941 627 aa19.88■□□□□ 0.77
NUP50-202ENST00000396096 ZAP70P43403 619 aa19.88■□□□□ 0.77
NUP50-202ENST00000396096 HS1BP3Q53T59 392 aa19.88■□□□□ 0.77
NUP50-202ENST00000396096 APPBP2Q92624 585 aa19.88■□□□□ 0.77
NUP50-202ENST00000396096 BRF1Q92994 677 aa19.88■□□□□ 0.77
NUP50-202ENST00000396096 CTNNA3Q9UI47 895 aa19.88■□□□□ 0.77
NUP50-202ENST00000396096 DDB1Q16531 1140 aa19.87■□□□□ 0.77
NUP50-202ENST00000396096 INTS5Q6P9B9 1019 aaKnown RBP19.87■□□□□ 0.77
NUP50-202ENST00000396096 ATRNO75882 1429 aa19.86■□□□□ 0.77
NUP50-202ENST00000396096 DDX60Q8IY21 1712 aaKnown RBP19.86■□□□□ 0.77
NUP50-202ENST00000396096 FOXP2O15409 715 aa19.86■□□□□ 0.77
NUP50-202ENST00000396096 HSP90B1P14625 803 aaKnown RBP19.86■□□□□ 0.77
NUP50-202ENST00000396096 CNNM1Q9NRU3 951 aa19.86■□□□□ 0.77
NUP50-202ENST00000396096 CCDC87Q9NVE4 849 aa19.86■□□□□ 0.77
NUP50-202ENST00000396096 TBC1D2BQ9UPU7 963 aa19.86■□□□□ 0.77
NUP50-202ENST00000396096 LAMB2P55268 1798 aa19.86■□□□□ 0.77
NUP50-202ENST00000396096 PDE8BO95263 885 aa19.86■□□□□ 0.77
NUP50-202ENST00000396096 SCRN1Q12765 414 aa19.86■□□□□ 0.77
NUP50-202ENST00000396096 FAM184AQ8NB25 1140 aa19.86■□□□□ 0.77
NUP50-202ENST00000396096 JAK2O60674 1132 aa19.85■□□□□ 0.77
NUP50-202ENST00000396096 CHMP4CQ96CF2 233 aa19.85■□□□□ 0.77
NUP50-202ENST00000396096 MCAMP43121 646 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 EVCP57679 992 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 FGD1P98174 961 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 TTF1Q15361 905 aaPredicted RBP19.84■□□□□ 0.77
NUP50-202ENST00000396096 ZSCAN25Q6NSZ9 544 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 TTC6Q86TZ1 520 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 ZNF274Q96GC6 653 aaPredicted RBP19.84■□□□□ 0.77
NUP50-202ENST00000396096 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.84■□□□□ 0.77
NUP50-202ENST00000396096 SCAND2PQ9GZW5 306 aaPredicted RBP19.84■□□□□ 0.77
NUP50-202ENST00000396096 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 SPATA31A5Q5VU36 1347 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 SPATA31A7Q8IWB4 1347 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 A0A0G2JLW4 131 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 ARID4AP29374 1257 aaPredicted RBP19.84■□□□□ 0.77
NUP50-202ENST00000396096 WASHC4Q2M389 1173 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 UVSSAQ2YD98 709 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 LRRC2Q9BYS8 371 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 MYH15Q9Y2K3 1946 aa19.84■□□□□ 0.77
NUP50-202ENST00000396096 MROH5Q6ZUA9 1318 aa19.83■□□□□ 0.77
NUP50-202ENST00000396096 HMGN5P82970 282 aaKnown RBP19.83■□□□□ 0.76
NUP50-202ENST00000396096 IMMTQ16891 758 aaKnown RBP19.83■□□□□ 0.76
NUP50-202ENST00000396096 BARGINQ6ZT62 677 aa19.83■□□□□ 0.76
NUP50-202ENST00000396096 FERMT3Q86UX7 667 aa19.83■□□□□ 0.76
NUP50-202ENST00000396096 MARCH10Q8NA82 808 aaPredicted RBP19.83■□□□□ 0.76
NUP50-202ENST00000396096 NSUN7Q8NE18 718 aaKnown RBP19.83■□□□□ 0.76
NUP50-202ENST00000396096 FGFR2P21802 821 aa19.82■□□□□ 0.76
NUP50-202ENST00000396096 CRKLP46109 303 aaKnown RBP19.82■□□□□ 0.76
NUP50-202ENST00000396096 RESTQ13127 1097 aa19.82■□□□□ 0.76
NUP50-202ENST00000396096 TTLL5Q6EMB2 1281 aa19.82■□□□□ 0.76
NUP50-202ENST00000396096 ZSCAN16Q9H4T2 348 aaPredicted RBP19.82■□□□□ 0.76
NUP50-202ENST00000396096 MYH14Q7Z406 1995 aaKnown RBP19.82■□□□□ 0.76
NUP50-202ENST00000396096 COL5A3P25940 1745 aaPredicted RBP19.82■□□□□ 0.76
NUP50-202ENST00000396096 UQCRFS1P1P0C7P4 283 aa19.82■□□□□ 0.76
NUP50-202ENST00000396096 ADD2P35612 726 aa19.82■□□□□ 0.76
NUP50-202ENST00000396096 APOBRQ0VD83 1088 aa19.82■□□□□ 0.76
NUP50-202ENST00000396096 PUM3Q15397 648 aaKnown RBP19.82■□□□□ 0.76
NUP50-202ENST00000396096 PARP10Q53GL7 1025 aa19.82■□□□□ 0.76
NUP50-202ENST00000396096 NAA16Q6N069 864 aaPredicted RBP19.82■□□□□ 0.76
NUP50-202ENST00000396096 PI16Q6UXB8 463 aa19.82■□□□□ 0.76
NUP50-202ENST00000396096 PUS7LQ9H0K6 701 aaKnown RBP19.82■□□□□ 0.76
NUP50-202ENST00000396096 SALL1Q9NSC2 1324 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 RTL9Q8NET4 1388 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 LOC102724428A0A0B4J2F2 783 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 ADAMTS2O95450 1211 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 CTDNEP1O95476 244 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 FGAP02671 866 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 ATP6V1AP38606 617 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 SIK1P57059 783 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 SUSD4Q5VX71 490 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 ZSCAN30Q86W11 494 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 LPIN2Q92539 896 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 FUCA2Q9BTY2 467 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 KIF3AQ9Y496 699 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 WDR19Q8NEZ3 1342 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 BCORQ6W2J9 1755 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 DOCK2Q92608 1830 aa19.81■□□□□ 0.76
NUP50-202ENST00000396096 MYO5AQ9Y4I1 1855 aaKnown RBP19.8■□□□□ 0.76
NUP50-202ENST00000396096 GPAA1O43292 621 aa19.8■□□□□ 0.76
NUP50-202ENST00000396096 CAMTA2O94983 1202 aa19.8■□□□□ 0.76
NUP50-202ENST00000396096 UBE3CQ15386 1083 aa19.8■□□□□ 0.76
NUP50-202ENST00000396096 UTP14AQ9BVJ6 771 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms