RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 KIF4BQ2VIQ3 1234 aa20.57■□□□□ 0.88
CXCL12-206ENST00000395795 USP17L1Q7RTZ2 530 aa20.57■□□□□ 0.88
CXCL12-206ENST00000395795 CAPNS2Q96L46 248 aa20.57■□□□□ 0.88
CXCL12-206ENST00000395795 ZNF804BA4D1E1 1349 aa20.56■□□□□ 0.88
CXCL12-206ENST00000395795 UTYO14607 1347 aa20.56■□□□□ 0.88
CXCL12-206ENST00000395795 ADM5C9JUS6 153 aa20.56■□□□□ 0.88
CXCL12-206ENST00000395795 E9PSI1 815 aa20.56■□□□□ 0.88
CXCL12-206ENST00000395795 LMBR1LQ6UX01 489 aa20.56■□□□□ 0.88
CXCL12-206ENST00000395795 SSH1Q8WYL5 1049 aa20.56■□□□□ 0.88
CXCL12-206ENST00000395795 ANKRD18BA2A2Z9 1011 aa20.55■□□□□ 0.88
CXCL12-206ENST00000395795 KRT26Q7Z3Y9 468 aa20.55■□□□□ 0.88
CXCL12-206ENST00000395795 COA1Q9GZY4 146 aa20.55■□□□□ 0.88
CXCL12-206ENST00000395795 NBPF7P0C2Y1 421 aaPredicted RBP20.54■□□□□ 0.88
CXCL12-206ENST00000395795 C15orf52Q6ZUT6 534 aaKnown RBP20.54■□□□□ 0.88
CXCL12-206ENST00000395795 SUCLG2Q96I99 432 aa20.54■□□□□ 0.88
CXCL12-206ENST00000395795 ZNF594Q96JF6 807 aaPredicted RBP20.54■□□□□ 0.88
CXCL12-206ENST00000395795 HHIPL1Q96JK4 782 aa20.54■□□□□ 0.88
CXCL12-206ENST00000395795 SRCIN1Q9C0H9 1055 aa20.54■□□□□ 0.88
CXCL12-206ENST00000395795 ANKRD2Q9GZV1 360 aa20.54■□□□□ 0.88
CXCL12-206ENST00000395795 GGA3Q9NZ52 723 aa20.54■□□□□ 0.88
CXCL12-206ENST00000395795 G3V3G9 751 aa20.53■□□□□ 0.88
CXCL12-206ENST00000395795 TAF5LO75529 589 aa20.53■□□□□ 0.88
CXCL12-206ENST00000395795 USP17L8P0C7I0 530 aa20.53■□□□□ 0.88
CXCL12-206ENST00000395795 DCAF8Q5TAQ9 597 aa20.53■□□□□ 0.88
CXCL12-206ENST00000395795 STRIP1Q5VSL9 837 aa20.53■□□□□ 0.88
CXCL12-206ENST00000395795 SLC4A10Q6U841 1118 aa20.53■□□□□ 0.88
CXCL12-206ENST00000395795 HELBQ8NG08 1087 aaPredicted RBP20.53■□□□□ 0.88
CXCL12-206ENST00000395795 MPHOSPH8Q99549 860 aa20.53■□□□□ 0.88
CXCL12-206ENST00000395795 AOC2O75106 756 aa20.52■□□□□ 0.88
CXCL12-206ENST00000395795 IFIT5Q13325 482 aaKnown RBP20.52■□□□□ 0.88
CXCL12-206ENST00000395795 SCARF1Q14162 830 aa20.52■□□□□ 0.88
CXCL12-206ENST00000395795 ZNF408Q9H9D4 720 aa20.52■□□□□ 0.88
CXCL12-206ENST00000395795 MYOZ2Q9NPC6 264 aa20.52■□□□□ 0.88
CXCL12-206ENST00000395795 CCER2I3L3R5 266 aa20.51■□□□□ 0.87
CXCL12-206ENST00000395795 HSPA8P11142 646 aaKnown RBP20.51■□□□□ 0.87
CXCL12-206ENST00000395795 ZIC5Q96T25 663 aa20.51■□□□□ 0.87
CXCL12-206ENST00000395795 PRDM10Q9NQV6 1147 aa20.51■□□□□ 0.87
CXCL12-206ENST00000395795 ECE1P42892 770 aa20.5■□□□□ 0.87
CXCL12-206ENST00000395795 RABL6Q3YEC7 729 aaPredicted RBP20.5■□□□□ 0.87
CXCL12-206ENST00000395795 ANGEL2Q5VTE6 544 aaKnown RBP20.5■□□□□ 0.87
CXCL12-206ENST00000395795 TNS4Q8IZW8 715 aa20.5■□□□□ 0.87
CXCL12-206ENST00000395795 ANKRD44Q8N8A2 993 aa20.5■□□□□ 0.87
CXCL12-206ENST00000395795 DCPSQ96C86 337 aaKnown RBP20.5■□□□□ 0.87
CXCL12-206ENST00000395795 ZBED3Q96IU2 234 aaPredicted RBP20.5■□□□□ 0.87
CXCL12-206ENST00000395795 CD209Q9NNX6 404 aa20.5■□□□□ 0.87
CXCL12-206ENST00000395795 C9orf78Q9NZ63 289 aaPredicted RBP20.5■□□□□ 0.87
CXCL12-206ENST00000395795 FAM155AB1AL88 458 aaPredicted RBP20.49■□□□□ 0.87
CXCL12-206ENST00000395795 CTCFP49711 727 aaPredicted RBP20.49■□□□□ 0.87
CXCL12-206ENST00000395795 MAP2K1Q02750 393 aaPredicted RBP20.49■□□□□ 0.87
CXCL12-206ENST00000395795 NBPF9Q3BBW0 867 aa20.49■□□□□ 0.87
CXCL12-206ENST00000395795 CERS5Q8N5B7 392 aa20.49■□□□□ 0.87
CXCL12-206ENST00000395795 PUS3Q9BZE2 481 aaKnown RBP20.49■□□□□ 0.87
CXCL12-206ENST00000395795 PTPRCP08575 1304 aa20.49■□□□□ 0.87
CXCL12-206ENST00000395795 MAP2K2P36507 400 aa20.48■□□□□ 0.87
CXCL12-206ENST00000395795 LBX1P52954 281 aa20.48■□□□□ 0.87
CXCL12-206ENST00000395795 CDCA5Q96FF9 252 aa20.48■□□□□ 0.87
CXCL12-206ENST00000395795 USP44Q9H0E7 712 aa20.48■□□□□ 0.87
CXCL12-206ENST00000395795 SCAF8Q9UPN6 1271 aaKnown RBP20.48■□□□□ 0.87
CXCL12-206ENST00000395795 CHMP3Q9Y3E7 222 aa20.48■□□□□ 0.87
CXCL12-206ENST00000395795 WNT10BO00744 389 aa20.47■□□□□ 0.87
CXCL12-206ENST00000395795 IL1R1P14778 569 aa20.47■□□□□ 0.87
CXCL12-206ENST00000395795 GRM1Q13255 1194 aa20.47■□□□□ 0.87
CXCL12-206ENST00000395795 TTLL5Q6EMB2 1281 aa20.47■□□□□ 0.87
CXCL12-206ENST00000395795 PAXIP1Q6ZW49 1069 aaPredicted RBP20.47■□□□□ 0.87
CXCL12-206ENST00000395795 BICC1Q9H694 974 aaKnown RBP20.47■□□□□ 0.87
CXCL12-206ENST00000395795 GBA2Q9HCG7 927 aaPredicted RBP20.47■□□□□ 0.87
CXCL12-206ENST00000395795 PITPNM2Q9BZ72 1349 aa20.47■□□□□ 0.87
CXCL12-206ENST00000395795 HUNKP57058 714 aa20.46■□□□□ 0.87
CXCL12-206ENST00000395795 GTF2IP78347 998 aa20.46■□□□□ 0.87
CXCL12-206ENST00000395795 CCDC57Q2TAC2 916 aa20.46■□□□□ 0.87
CXCL12-206ENST00000395795 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
CXCL12-206ENST00000395795 LDHAL6AQ6ZMR3 332 aa20.46■□□□□ 0.87
CXCL12-206ENST00000395795 SULF1Q8IWU6 871 aa20.46■□□□□ 0.87
CXCL12-206ENST00000395795 RIPOR2Q9Y4F9 1068 aa20.46■□□□□ 0.87
CXCL12-206ENST00000395795 MYO3BQ8WXR4 1341 aa20.46■□□□□ 0.87
CXCL12-206ENST00000395795 AIDAQ96BJ3 306 aa20.45■□□□□ 0.86
CXCL12-206ENST00000395795 KCNJ4P48050 445 aa20.43■□□□□ 0.86
CXCL12-206ENST00000395795 BRPF1P55201 1214 aaPredicted RBP20.43■□□□□ 0.86
CXCL12-206ENST00000395795 RGMBQ6NW40 437 aa20.43■□□□□ 0.86
CXCL12-206ENST00000395795 KIAA0825Q8IV33 1275 aa20.43■□□□□ 0.86
CXCL12-206ENST00000395795 VGLL2Q8N8G2 317 aa20.43■□□□□ 0.86
CXCL12-206ENST00000395795 FBXW7Q969H0 707 aa20.43■□□□□ 0.86
CXCL12-206ENST00000395795 PCDHAC2Q9Y5I4 1007 aa20.43■□□□□ 0.86
CXCL12-206ENST00000395795 SASH1O94885 1247 aa20.42■□□□□ 0.86
CXCL12-206ENST00000395795 LRRC24Q50LG9 513 aa20.42■□□□□ 0.86
CXCL12-206ENST00000395795 PRAMEF18Q5VWM3 479 aa20.42■□□□□ 0.86
CXCL12-206ENST00000395795 CNNM1Q9NRU3 951 aa20.42■□□□□ 0.86
CXCL12-206ENST00000395795 AOX1Q06278 1338 aa20.42■□□□□ 0.86
CXCL12-206ENST00000395795 PLIN1O60240 522 aa20.41■□□□□ 0.86
CXCL12-206ENST00000395795 RFX5P48382 616 aaPredicted RBP20.41■□□□□ 0.86
CXCL12-206ENST00000395795 MMP14P50281 582 aa20.41■□□□□ 0.86
CXCL12-206ENST00000395795 MOB2Q70IA6 237 aa20.41■□□□□ 0.86
CXCL12-206ENST00000395795 C2orf69Q8N8R5 385 aa20.41■□□□□ 0.86
CXCL12-206ENST00000395795 TDRD7Q8NHU6 1098 aaKnown RBP20.41■□□□□ 0.86
CXCL12-206ENST00000395795 FAM84BQ96KN1 310 aaPredicted RBP20.41■□□□□ 0.86
CXCL12-206ENST00000395795 NOGQ13253 232 aa20.4■□□□□ 0.86
CXCL12-206ENST00000395795 UBE4AQ14139 1066 aa20.4■□□□□ 0.86
CXCL12-206ENST00000395795 OGFOD1Q8N543 542 aa20.4■□□□□ 0.86
CXCL12-206ENST00000395795 KLHDC4Q8TBB5 520 aa20.4■□□□□ 0.86
CXCL12-206ENST00000395795 PAPPA2Q9BXP8 1791 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms