RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 PPP2R3AQ06190 1150 aa19.58■□□□□ 0.72
SIN3A-203ENST00000394949 FAM76AQ8TAV0 307 aa19.58■□□□□ 0.72
SIN3A-203ENST00000394949 SELENOOQ9BVL4 669 aa19.58■□□□□ 0.72
SIN3A-203ENST00000394949 CNNM2Q9H8M5 875 aa19.58■□□□□ 0.72
SIN3A-203ENST00000394949 ANKS4BQ8N8V4 417 aa19.58■□□□□ 0.72
SIN3A-203ENST00000394949 EXOC1Q9NV70 894 aa19.58■□□□□ 0.72
SIN3A-203ENST00000394949 STMN4Q9H169 189 aaPredicted RBP19.57■□□□□ 0.72
SIN3A-203ENST00000394949 BAG1Q99933 345 aaPredicted RBP19.57■□□□□ 0.72
SIN3A-203ENST00000394949 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
SIN3A-203ENST00000394949 ZFYVE9O95405 1425 aa19.57■□□□□ 0.72
SIN3A-203ENST00000394949 DDX46Q7L014 1031 aaKnown RBP19.57■□□□□ 0.72
SIN3A-203ENST00000394949 ZNF569Q5MCW4 686 aa19.57■□□□□ 0.72
SIN3A-203ENST00000394949 KRBA2Q6ZNG9 492 aa19.57■□□□□ 0.72
SIN3A-203ENST00000394949 UTP14AQ9BVJ6 771 aaKnown RBP19.57■□□□□ 0.72
SIN3A-203ENST00000394949 ATP5J2-PTCD1G3V325 749 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 KIAA0753Q2KHM9 967 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 MSL1Q68DK7 614 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 HOOK3Q86VS8 718 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 CCDC172P0C7W6 258 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 IDEP14735 1019 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 MARCKSP29966 332 aaPredicted RBP19.56■□□□□ 0.72
SIN3A-203ENST00000394949 LRRC2Q9BYS8 371 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 PLCH2O75038 1416 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 ITSN2Q9NZM3 1697 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 PTPDC1A2A3K4 754 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 UQCRFS1P1P0C7P4 283 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 VAV2P52735 878 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 C6orf163Q5TEZ5 329 aa19.56■□□□□ 0.72
SIN3A-203ENST00000394949 DHX32Q7L7V1 743 aaKnown RBP19.56■□□□□ 0.72
SIN3A-203ENST00000394949 WTAPQ15007 396 aa19.55■□□□□ 0.72
SIN3A-203ENST00000394949 CCDC129Q6ZRS4 1044 aa19.55■□□□□ 0.72
SIN3A-203ENST00000394949 CCDC144CPQ8IYA2 1237 aa19.55■□□□□ 0.72
SIN3A-203ENST00000394949 FSD2A1L4K1 749 aa19.55■□□□□ 0.72
SIN3A-203ENST00000394949 MYO1BO43795 1136 aa19.55■□□□□ 0.72
SIN3A-203ENST00000394949 AFMP43652 599 aa19.55■□□□□ 0.72
SIN3A-203ENST00000394949 CFAP43Q8NDM7 1665 aa19.55■□□□□ 0.72
SIN3A-203ENST00000394949 KARSQ15046 597 aaKnown RBP19.55■□□□□ 0.72
SIN3A-203ENST00000394949 PUF60Q9UHX1 559 aaKnown RBP19.55■□□□□ 0.72
SIN3A-203ENST00000394949 GRM8O00222 908 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 BAG3O95817 575 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 ELP1O95163 1332 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 DUOX2Q9NRD8 1548 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 PRPF4BQ13523 1007 aaKnown RBP19.54■□□□□ 0.72
SIN3A-203ENST00000394949 SPTY2D1Q68D10 685 aaPredicted RBP19.54■□□□□ 0.72
SIN3A-203ENST00000394949 TSPYL6Q8N831 410 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 PLVAPQ9BX97 442 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 LZTFL1Q9NQ48 299 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 C6orf229H3BNL8 230 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 BRD1O95696 1058 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 BCL2L12Q9HB09 334 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 CBX8Q9HC52 389 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 UHRF1BP1LA0JNW5 1464 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 PPFIA3O75145 1194 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 UBA5Q9GZZ9 404 aa19.54■□□□□ 0.72
SIN3A-203ENST00000394949 TRIM75PA6NK02 468 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 AKR1B15C9JRZ8 316 aaPredicted RBP19.53■□□□□ 0.72
SIN3A-203ENST00000394949 RTN1Q16799 776 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 HSP90AA4PQ58FG1 418 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 B4GALNT4Q76KP1 1039 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 PRPHP41219 470 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 STAT6P42226 847 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 LLPHQ9BRT6 129 aaKnown RBP19.53■□□□□ 0.72
SIN3A-203ENST00000394949 SNRKQ9NRH2 765 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 TMEM63CQ9P1W3 806 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 RHOXF2BP0C7M4 288 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 UBE4AQ14139 1066 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 ELF2Q15723 593 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 KSR2Q6VAB6 950 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 CUL5Q93034 780 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 CCDC42Q96M95 316 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 RHOXF2Q9BQY4 288 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 RASAL2Q9UJF2 1139 aa19.53■□□□□ 0.72
SIN3A-203ENST00000394949 PHACTR2O75167 634 aa19.52■□□□□ 0.72
SIN3A-203ENST00000394949 STXBP4Q6ZWJ1 553 aa19.52■□□□□ 0.72
SIN3A-203ENST00000394949 RAB11FIP4Q86YS3 637 aa19.52■□□□□ 0.72
SIN3A-203ENST00000394949 CTNNBL1Q8WYA6 563 aaPredicted RBP19.52■□□□□ 0.72
SIN3A-203ENST00000394949 PRC1O43663 620 aa19.52■□□□□ 0.72
SIN3A-203ENST00000394949 PDE4BQ07343 736 aa19.52■□□□□ 0.72
SIN3A-203ENST00000394949 AFAP1L1Q8TED9 768 aa19.52■□□□□ 0.72
SIN3A-203ENST00000394949 CHRNA2Q15822 529 aa19.52■□□□□ 0.71
SIN3A-203ENST00000394949 GBP6Q6ZN66 633 aa19.51■□□□□ 0.71
SIN3A-203ENST00000394949 LMBR1Q8WVP7 490 aa19.51■□□□□ 0.71
SIN3A-203ENST00000394949 TTC14Q96N46 770 aa19.51■□□□□ 0.71
SIN3A-203ENST00000394949 SPAG5Q96R06 1193 aa19.51■□□□□ 0.71
SIN3A-203ENST00000394949 TTF2Q9UNY4 1162 aaKnown RBP19.51■□□□□ 0.71
SIN3A-203ENST00000394949 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
SIN3A-203ENST00000394949 CHPF2Q9P2E5 772 aa19.51■□□□□ 0.71
SIN3A-203ENST00000394949 POLKQ9UBT6 870 aa19.51■□□□□ 0.71
SIN3A-203ENST00000394949 GUCA1BQ9UMX6 200 aa19.51■□□□□ 0.71
SIN3A-203ENST00000394949 TCERG1LQ5VWI1 586 aa19.51■□□□□ 0.71
SIN3A-203ENST00000394949 CARD14Q9BXL6 1004 aa19.51■□□□□ 0.71
SIN3A-203ENST00000394949 IL15P40933 162 aaPredicted RBP19.51■□□□□ 0.71
SIN3A-203ENST00000394949 TRIM14Q14142 442 aa19.51■□□□□ 0.71
SIN3A-203ENST00000394949 LUC7L2Q9Y383 392 aaKnown RBP19.51■□□□□ 0.71
SIN3A-203ENST00000394949 ATP2C2O75185 946 aa19.5■□□□□ 0.71
SIN3A-203ENST00000394949 PPM1EQ8WY54 764 aa19.5■□□□□ 0.71
SIN3A-203ENST00000394949 CCDC114Q96M63 670 aa19.5■□□□□ 0.71
SIN3A-203ENST00000394949 TSGA10Q9BZW7 698 aa19.5■□□□□ 0.71
SIN3A-203ENST00000394949 ZCRB1Q8TBF4 217 aaKnown RBP19.5■□□□□ 0.71
SIN3A-203ENST00000394949 BICDL2A1A5D9 508 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms