RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 MNS1Q8NEH6 495 aa25.35■■□□□ 1.65
CLDND1-202ENST00000394180 ANO10Q9NW15 660 aa25.35■■□□□ 1.65
CLDND1-202ENST00000394180 RAB11FIP3O75154 756 aa25.34■■□□□ 1.65
CLDND1-202ENST00000394180 ARID5BQ14865 1188 aa25.34■■□□□ 1.65
CLDND1-202ENST00000394180 MKRN1Q9UHC7 482 aaKnown RBP25.34■■□□□ 1.65
CLDND1-202ENST00000394180 BECN2A8MW95 431 aa25.33■■□□□ 1.65
CLDND1-202ENST00000394180 LEKR1Q6ZMV7 388 aa25.33■■□□□ 1.65
CLDND1-202ENST00000394180 NAT10Q9H0A0 1025 aaKnown RBP25.33■■□□□ 1.65
CLDND1-202ENST00000394180 LCMT1Q9UIC8 334 aa25.33■■□□□ 1.65
CLDND1-202ENST00000394180 EXOC6BQ9Y2D4 811 aa25.33■■□□□ 1.65
CLDND1-202ENST00000394180 SPATA31A6Q5VVP1 1343 aa25.33■■□□□ 1.65
CLDND1-202ENST00000394180 LARGE1O95461 756 aa25.33■■□□□ 1.65
CLDND1-202ENST00000394180 IL2RBP14784 551 aa25.33■■□□□ 1.65
CLDND1-202ENST00000394180 PPM1EQ8WY54 764 aa25.33■■□□□ 1.65
CLDND1-202ENST00000394180 NGLY1Q96IV0 654 aa25.33■■□□□ 1.65
CLDND1-202ENST00000394180 N4BP2Q86UW6 1770 aaPredicted RBP25.33■■□□□ 1.64
CLDND1-202ENST00000394180 CPP00450 1065 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 ATP2B1P20020 1258 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 UNC5CLQ8IV45 518 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 RUFY2Q8WXA3 655 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 ADAM21Q9UKJ8 722 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 SPG7Q9UQ90 795 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 HDAC5Q9UQL6 1122 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 NR1I2O75469 434 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 FCHSD1Q86WN1 690 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 CNTROBQ8N137 903 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 IL25Q9H293 177 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 ARFGAP3Q9NP61 516 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 USP16Q9Y5T5 823 aa25.32■■□□□ 1.64
CLDND1-202ENST00000394180 OVOS2A0A0G2JMS6 1433 aa25.31■■□□□ 1.64
CLDND1-202ENST00000394180 CYP27B1O15528 508 aa25.31■■□□□ 1.64
CLDND1-202ENST00000394180 ANKRD1Q15327 319 aa25.31■■□□□ 1.64
CLDND1-202ENST00000394180 SLIT2O94813 1529 aa25.31■■□□□ 1.64
CLDND1-202ENST00000394180 DEF6Q9H4E7 631 aa25.31■■□□□ 1.64
CLDND1-202ENST00000394180 NPHP1O15259 732 aa25.3■■□□□ 1.64
CLDND1-202ENST00000394180 ST3GAL1Q11201 340 aa25.3■■□□□ 1.64
CLDND1-202ENST00000394180 BPIFA3Q9BQP9 254 aa25.3■■□□□ 1.64
CLDND1-202ENST00000394180 SOS1Q07889 1333 aaPredicted RBP25.3■■□□□ 1.64
CLDND1-202ENST00000394180 NRAPQ86VF7 1730 aa25.29■■□□□ 1.64
CLDND1-202ENST00000394180 BRD2P25440 801 aaKnown RBP25.29■■□□□ 1.64
CLDND1-202ENST00000394180 TSHZ3Q63HK5 1081 aa25.29■■□□□ 1.64
CLDND1-202ENST00000394180 DHX40Q8IX18 779 aaKnown RBP25.29■■□□□ 1.64
CLDND1-202ENST00000394180 BICD2Q8TD16 824 aa25.29■■□□□ 1.64
CLDND1-202ENST00000394180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.29■■□□□ 1.64
CLDND1-202ENST00000394180 CFAP45Q9UL16 551 aa25.29■■□□□ 1.64
CLDND1-202ENST00000394180 PHKG2P15735 406 aa25.29■■□□□ 1.64
CLDND1-202ENST00000394180 CDC37L1Q7L3B6 337 aa25.29■■□□□ 1.64
CLDND1-202ENST00000394180 CEP57L1Q8IYX8 460 aa25.29■■□□□ 1.64
CLDND1-202ENST00000394180 ME3Q16798 604 aa25.28■■□□□ 1.64
CLDND1-202ENST00000394180 RPAINQ86UA6 219 aa25.28■■□□□ 1.64
CLDND1-202ENST00000394180 PGBD1Q96JS3 809 aa25.28■■□□□ 1.64
CLDND1-202ENST00000394180 MPHOSPH8Q99549 860 aa25.28■■□□□ 1.64
CLDND1-202ENST00000394180 CEMIPQ8WUJ3 1361 aa25.28■■□□□ 1.64
CLDND1-202ENST00000394180 SASH3O75995 380 aa25.28■■□□□ 1.64
CLDND1-202ENST00000394180 USP42Q9H9J4 1324 aaKnown RBP25.27■■□□□ 1.64
CLDND1-202ENST00000394180 SFPQP23246 707 aaKnown RBP eCLIP25.27■■□□□ 1.64
CLDND1-202ENST00000394180 CCDC91Q7Z6B0 441 aa25.27■■□□□ 1.64
CLDND1-202ENST00000394180 LRRN4CLQ8ND94 238 aa25.27■■□□□ 1.64
CLDND1-202ENST00000394180 ZCRB1Q8TBF4 217 aaKnown RBP25.27■■□□□ 1.64
CLDND1-202ENST00000394180 RABGGTAQ92696 567 aa25.27■■□□□ 1.64
CLDND1-202ENST00000394180 FUT8Q9BYC5 575 aa25.27■■□□□ 1.64
CLDND1-202ENST00000394180 ZSCAN16Q9H4T2 348 aaPredicted RBP25.27■■□□□ 1.64
CLDND1-202ENST00000394180 LOC102724159A0A0B4J2E5 919 aa25.27■■□□□ 1.64
CLDND1-202ENST00000394180 MAP2K7O14733 419 aa25.27■■□□□ 1.64
CLDND1-202ENST00000394180 RNMTO43148 476 aaKnown RBP25.27■■□□□ 1.64
CLDND1-202ENST00000394180 TUBB4BP68371 445 aa25.27■■□□□ 1.64
CLDND1-202ENST00000394180 BRD3Q15059 726 aa25.27■■□□□ 1.64
CLDND1-202ENST00000394180 PWP2Q15269 919 aaKnown RBP25.27■■□□□ 1.64
CLDND1-202ENST00000394180 C11orf57Q6ZUT1 292 aaPredicted RBP25.27■■□□□ 1.64
CLDND1-202ENST00000394180 CEP89Q96ST8 783 aa25.27■■□□□ 1.64
CLDND1-202ENST00000394180 CCDC9Q9Y3X0 531 aaKnown RBP25.27■■□□□ 1.64
CLDND1-202ENST00000394180 PKD1L3Q7Z443 1732 aa25.26■■□□□ 1.63
CLDND1-202ENST00000394180 LRRC37A3O60309 1634 aa25.26■■□□□ 1.63
CLDND1-202ENST00000394180 PARP4Q9UKK3 1724 aaKnown RBP25.26■■□□□ 1.63
CLDND1-202ENST00000394180 ATL3Q6DD88 541 aa25.26■■□□□ 1.63
CLDND1-202ENST00000394180 NBPF11Q86T75 865 aa25.26■■□□□ 1.63
CLDND1-202ENST00000394180 IFNL2Q8IZJ0 200 aa25.26■■□□□ 1.63
CLDND1-202ENST00000394180 PI4K2BQ8TCG2 481 aa25.26■■□□□ 1.63
CLDND1-202ENST00000394180 HNRNPLLQ8WVV9 542 aaKnown RBP25.26■■□□□ 1.63
CLDND1-202ENST00000394180 TSPYL4Q9UJ04 414 aa25.26■■□□□ 1.63
CLDND1-202ENST00000394180 CHMP3Q9Y3E7 222 aa25.26■■□□□ 1.63
CLDND1-202ENST00000394180 CCDC151A5D8V7 595 aa25.25■■□□□ 1.63
CLDND1-202ENST00000394180 PSMA5P28066 241 aa25.25■■□□□ 1.63
CLDND1-202ENST00000394180 PXDNLA1KZ92 1463 aa25.25■■□□□ 1.63
CLDND1-202ENST00000394180 SPATA31A1Q5TZJ5 1347 aa25.25■■□□□ 1.63
CLDND1-202ENST00000394180 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.25■■□□□ 1.63
CLDND1-202ENST00000394180 GSCP56915 257 aaPredicted RBP25.25■■□□□ 1.63
CLDND1-202ENST00000394180 CORO7P57737 925 aa25.25■■□□□ 1.63
CLDND1-202ENST00000394180 MEX3CQ5U5Q3 659 aaKnown RBP25.25■■□□□ 1.63
CLDND1-202ENST00000394180 DDX54Q8TDD1 881 aaKnown RBP25.25■■□□□ 1.63
CLDND1-202ENST00000394180 BCL9LQ86UU0 1499 aa25.25■■□□□ 1.63
CLDND1-202ENST00000394180 GOLGA6L9A6NEM1 432 aa25.24■■□□□ 1.63
CLDND1-202ENST00000394180 JAKMIP1Q96N16 626 aaKnown RBP25.24■■□□□ 1.63
CLDND1-202ENST00000394180 NWD2Q9ULI1 1742 aa25.24■■□□□ 1.63
CLDND1-202ENST00000394180 SLC4A2P04920 1241 aa25.24■■□□□ 1.63
CLDND1-202ENST00000394180 LMAN1P49257 510 aa25.24■■□□□ 1.63
CLDND1-202ENST00000394180 EVCP57679 992 aa25.24■■□□□ 1.63
CLDND1-202ENST00000394180 TAF7Q15545 349 aaPredicted RBP25.24■■□□□ 1.63
CLDND1-202ENST00000394180 TRIM65Q6PJ69 517 aa25.24■■□□□ 1.63
CLDND1-202ENST00000394180 RSRC2Q7L4I2 434 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms