RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 USP17L4A6NCW7 530 aa29.08■■■□□ 2.25
HMGA2-202ENST00000393577 PLIN1O60240 522 aa29.08■■■□□ 2.25
HMGA2-202ENST00000393577 USP17L1Q7RTZ2 530 aa29.08■■■□□ 2.25
HMGA2-202ENST00000393577 SAMD7Q7Z3H4 446 aa29.08■■■□□ 2.25
HMGA2-202ENST00000393577 PUS3Q9BZE2 481 aaKnown RBP29.08■■■□□ 2.25
HMGA2-202ENST00000393577 ZNF646O15015 1829 aaPredicted RBP29.08■■■□□ 2.25
HMGA2-202ENST00000393577 ZNF609O15014 1411 aa29.07■■■□□ 2.24
HMGA2-202ENST00000393577 UBTFL1P0CB47 393 aaPredicted RBP29.06■■■□□ 2.24
HMGA2-202ENST00000393577 TBC1D10BQ4KMP7 808 aaPredicted RBP29.06■■■□□ 2.24
HMGA2-202ENST00000393577 AGBL3Q8NEM8 1001 aa29.06■■■□□ 2.24
HMGA2-202ENST00000393577 FBXW7Q969H0 707 aa29.06■■■□□ 2.24
HMGA2-202ENST00000393577 IRS2Q9Y4H2 1338 aa29.05■■■□□ 2.24
HMGA2-202ENST00000393577 EGFRP00533 1210 aa29.05■■■□□ 2.24
HMGA2-202ENST00000393577 RBM26Q5T8P6 1007 aaKnown RBP29.05■■■□□ 2.24
HMGA2-202ENST00000393577 FRAT1Q92837 279 aaPredicted RBP29.05■■■□□ 2.24
HMGA2-202ENST00000393577 TMEM88BA6NKF7 163 aa29.04■■■□□ 2.24
HMGA2-202ENST00000393577 IPO8O15397 1037 aaKnown RBP29.04■■■□□ 2.24
HMGA2-202ENST00000393577 FMR1Q06787 632 aaKnown RBP eCLIP29.04■■■□□ 2.24
HMGA2-202ENST00000393577 ZC3H15Q8WU90 426 aaKnown RBP29.04■■■□□ 2.24
HMGA2-202ENST00000393577 PGAP2Q9UHJ9 254 aa29.04■■■□□ 2.24
HMGA2-202ENST00000393577 C15orf52Q6ZUT6 534 aaKnown RBP29.03■■■□□ 2.24
HMGA2-202ENST00000393577 TRPM7Q96QT4 1865 aa29.03■■■□□ 2.24
HMGA2-202ENST00000393577 TRAF5O00463 557 aa29.02■■■□□ 2.24
HMGA2-202ENST00000393577 TRIM27P14373 513 aa29.02■■■□□ 2.24
HMGA2-202ENST00000393577 KIF4BQ2VIQ3 1234 aa29.02■■■□□ 2.24
HMGA2-202ENST00000393577 DACT2Q5SW24 774 aa29.02■■■□□ 2.24
HMGA2-202ENST00000393577 INTS3Q68E01 1043 aaKnown RBP29.02■■■□□ 2.24
HMGA2-202ENST00000393577 ATF7IPQ6VMQ6 1270 aa29.02■■■□□ 2.24
HMGA2-202ENST00000393577 KLHDC4Q8TBB5 520 aa29.02■■■□□ 2.24
HMGA2-202ENST00000393577 GMLQ99445 158 aa29.02■■■□□ 2.24
HMGA2-202ENST00000393577 MXD3Q9BW11 206 aa29.02■■■□□ 2.24
HMGA2-202ENST00000393577 CD209Q9NNX6 404 aa29.02■■■□□ 2.24
HMGA2-202ENST00000393577 TNNQ9UQP3 1299 aa29.02■■■□□ 2.24
HMGA2-202ENST00000393577 RIPOR2Q9Y4F9 1068 aa29.02■■■□□ 2.24
HMGA2-202ENST00000393577 LRRC24Q50LG9 513 aa29.01■■■□□ 2.23
HMGA2-202ENST00000393577 STRIP1Q5VSL9 837 aa29.01■■■□□ 2.23
HMGA2-202ENST00000393577 MEIS3Q99687 375 aa29.01■■■□□ 2.23
HMGA2-202ENST00000393577 GLIS2Q9BZE0 524 aaPredicted RBP29.01■■■□□ 2.23
HMGA2-202ENST00000393577 MROH5Q6ZUA9 1318 aa29■■■□□ 2.23
HMGA2-202ENST00000393577 MKRN1Q9UHC7 482 aaKnown RBP29■■■□□ 2.23
HMGA2-202ENST00000393577 USP17L8P0C7I0 530 aa28.99■■■□□ 2.23
HMGA2-202ENST00000393577 ZNF280AP59817 542 aaPredicted RBP28.99■■■□□ 2.23
HMGA2-202ENST00000393577 TTLL5Q6EMB2 1281 aa28.99■■■□□ 2.23
HMGA2-202ENST00000393577 ZNF804AQ7Z570 1209 aa28.99■■■□□ 2.23
HMGA2-202ENST00000393577 LRRFIP2Q9Y608 721 aaKnown RBP28.99■■■□□ 2.23
HMGA2-202ENST00000393577 RFX5P48382 616 aaPredicted RBP28.98■■■□□ 2.23
HMGA2-202ENST00000393577 GTF2IP78347 998 aa28.98■■■□□ 2.23
HMGA2-202ENST00000393577 UBE4AQ14139 1066 aa28.98■■■□□ 2.23
HMGA2-202ENST00000393577 METTL24Q5JXM2 366 aa28.98■■■□□ 2.23
HMGA2-202ENST00000393577 CLUAP1Q96AJ1 413 aa28.98■■■□□ 2.23
HMGA2-202ENST00000393577 POLR2AP24928 1970 aaKnown RBP28.98■■■□□ 2.23
HMGA2-202ENST00000393577 MYO3BQ8WXR4 1341 aa28.97■■■□□ 2.23
HMGA2-202ENST00000393577 JMYQ8N9B5 988 aa28.97■■■□□ 2.23
HMGA2-202ENST00000393577 HDAC5Q9UQL6 1122 aa28.97■■■□□ 2.23
HMGA2-202ENST00000393577 ZKSCAN2Q63HK3 967 aa28.96■■■□□ 2.23
HMGA2-202ENST00000393577 CDC37L1Q7L3B6 337 aa28.96■■■□□ 2.23
HMGA2-202ENST00000393577 CNTNAP1P78357 1384 aa28.96■■■□□ 2.23
HMGA2-202ENST00000393577 IL1R1P14778 569 aa28.95■■■□□ 2.22
HMGA2-202ENST00000393577 MYOZ2Q9NPC6 264 aa28.95■■■□□ 2.22
HMGA2-202ENST00000393577 GNAI3P08754 354 aa28.94■■■□□ 2.22
HMGA2-202ENST00000393577 PTPN12Q05209 780 aaKnown RBP28.94■■■□□ 2.22
HMGA2-202ENST00000393577 USP48Q86UV5 1035 aa28.94■■■□□ 2.22
HMGA2-202ENST00000393577 GGA3Q9NZ52 723 aa28.94■■■□□ 2.22
HMGA2-202ENST00000393577 ABT1Q9ULW3 272 aaKnown RBP28.94■■■□□ 2.22
HMGA2-202ENST00000393577 ASTN2O75129 1339 aaPredicted RBP28.94■■■□□ 2.22
HMGA2-202ENST00000393577 GYG1P46976 350 aa28.93■■■□□ 2.22
HMGA2-202ENST00000393577 CST9Q5W186 159 aa28.93■■■□□ 2.22
HMGA2-202ENST00000393577 VGLL2Q8N8G2 317 aa28.93■■■□□ 2.22
HMGA2-202ENST00000393577 DCPSQ96C86 337 aaKnown RBP28.93■■■□□ 2.22
HMGA2-202ENST00000393577 EYA2O00167 538 aa28.92■■■□□ 2.22
HMGA2-202ENST00000393577 SCARF1Q14162 830 aa28.92■■■□□ 2.22
HMGA2-202ENST00000393577 KRT26Q7Z3Y9 468 aa28.92■■■□□ 2.22
HMGA2-202ENST00000393577 OGFOD1Q8N543 542 aa28.92■■■□□ 2.22
HMGA2-202ENST00000393577 PDE8BO95263 885 aa28.91■■■□□ 2.22
HMGA2-202ENST00000393577 CELF2O95319 508 aaKnown RBP28.91■■■□□ 2.22
HMGA2-202ENST00000393577 KIAA0825Q8IV33 1275 aa28.91■■■□□ 2.22
HMGA2-202ENST00000393577 ZNF408Q9H9D4 720 aa28.91■■■□□ 2.22
HMGA2-202ENST00000393577 ADM5C9JUS6 153 aa28.9■■■□□ 2.22
HMGA2-202ENST00000393577 HIBADHP31937 336 aaKnown RBP28.9■■■□□ 2.22
HMGA2-202ENST00000393577 DLK2Q6UY11 383 aa28.9■■■□□ 2.22
HMGA2-202ENST00000393577 TMEM57Q8N5G2 664 aa28.9■■■□□ 2.22
HMGA2-202ENST00000393577 FAM84BQ96KN1 310 aaPredicted RBP28.9■■■□□ 2.22
HMGA2-202ENST00000393577 SIL1Q9H173 461 aa28.9■■■□□ 2.22
HMGA2-202ENST00000393577 JAG2Q9Y219 1238 aa28.9■■■□□ 2.22
HMGA2-202ENST00000393577 RASSF10A6NK89 507 aa28.89■■■□□ 2.22
HMGA2-202ENST00000393577 ANGEL2Q5VTE6 544 aaKnown RBP28.89■■■□□ 2.22
HMGA2-202ENST00000393577 CERS5Q8N5B7 392 aa28.89■■■□□ 2.22
HMGA2-202ENST00000393577 DEFB115Q30KQ5 88 aa28.88■■■□□ 2.21
HMGA2-202ENST00000393577 TDRD7Q8NHU6 1098 aaKnown RBP28.88■■■□□ 2.21
HMGA2-202ENST00000393577 HDAC9Q9UKV0 1011 aa28.88■■■□□ 2.21
HMGA2-202ENST00000393577 PCNTO95613 3336 aa28.87■■■□□ 2.21
HMGA2-202ENST00000393577 VEGFBP49765 207 aa28.87■■■□□ 2.21
HMGA2-202ENST00000393577 PUM3Q15397 648 aaKnown RBP28.87■■■□□ 2.21
HMGA2-202ENST00000393577 ATG9AQ7Z3C6 839 aa28.87■■■□□ 2.21
HMGA2-202ENST00000393577 SULF1Q8IWU6 871 aa28.87■■■□□ 2.21
HMGA2-202ENST00000393577 PA2G4Q9UQ80 394 aaKnown RBP28.87■■■□□ 2.21
HMGA2-202ENST00000393577 SASH1O94885 1247 aa28.86■■■□□ 2.21
HMGA2-202ENST00000393577 MMP14P50281 582 aa28.86■■■□□ 2.21
HMGA2-202ENST00000393577 NBPF9Q3BBW0 867 aa28.86■■■□□ 2.21
HMGA2-202ENST00000393577 VPS37DQ86XT2 251 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms