RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 STOX1Q6ZVD7 989 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 NFATC2IPQ8NCF5 419 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 GPBP1L1Q9HC44 474 aaPredicted RBP13.59□□□□□ -0.23
CCDC57-205ENST00000392346 ATP6V1DQ9Y5K8 247 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 POLD1P28340 1107 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 CHRNA2Q15822 529 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 UVSSAQ2YD98 709 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 HSP90AB4PQ58FF6 505 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 AKAP4Q5JQC9 854 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 KIF3AQ9Y496 699 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 NWD2Q9ULI1 1742 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 SF3B2Q13435 895 aaKnown RBP13.59□□□□□ -0.23
CCDC57-205ENST00000392346 CCDC125Q86Z20 511 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 STRN4Q9NRL3 753 aa13.59□□□□□ -0.23
CCDC57-205ENST00000392346 GCP02774 474 aa13.58□□□□□ -0.24
CCDC57-205ENST00000392346 APOBRQ0VD83 1088 aa13.58□□□□□ -0.24
CCDC57-205ENST00000392346 FAM200AQ8TCP9 573 aa13.58□□□□□ -0.24
CCDC57-205ENST00000392346 MAP7D2Q96T17 732 aa13.58□□□□□ -0.24
CCDC57-205ENST00000392346 ABCA3Q99758 1704 aa13.58□□□□□ -0.24
CCDC57-205ENST00000392346 TAF5LO75529 589 aa13.58□□□□□ -0.24
CCDC57-205ENST00000392346 CYP21A2P08686 494 aa13.58□□□□□ -0.24
CCDC57-205ENST00000392346 FAM98CQ17RN3 349 aaKnown RBP13.58□□□□□ -0.24
CCDC57-205ENST00000392346 PLEKHO1Q53GL0 409 aaPredicted RBP13.58□□□□□ -0.24
CCDC57-205ENST00000392346 EXOC8Q8IYI6 725 aa13.58□□□□□ -0.24
CCDC57-205ENST00000392346 SH2B1Q9NRF2 756 aaPredicted RBP13.58□□□□□ -0.24
CCDC57-205ENST00000392346 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
CCDC57-205ENST00000392346 PLCH1Q4KWH8 1693 aa13.57□□□□□ -0.24
CCDC57-205ENST00000392346 NPHP1O15259 732 aa13.57□□□□□ -0.24
CCDC57-205ENST00000392346 EP400NLQ6ZTU2 488 aa13.57□□□□□ -0.24
CCDC57-205ENST00000392346 ZNF496Q96IT1 587 aaPredicted RBP13.57□□□□□ -0.24
CCDC57-205ENST00000392346 NEUROD6Q96NK8 337 aa13.57□□□□□ -0.24
CCDC57-205ENST00000392346 SCRN1Q12765 414 aa13.57□□□□□ -0.24
CCDC57-205ENST00000392346 MTX1Q13505 466 aa13.57□□□□□ -0.24
CCDC57-205ENST00000392346 TTLL5Q6EMB2 1281 aa13.57□□□□□ -0.24
CCDC57-205ENST00000392346 DNAJC14Q6Y2X3 702 aaPredicted RBP13.57□□□□□ -0.24
CCDC57-205ENST00000392346 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
CCDC57-205ENST00000392346 GOLPH3LQ9H4A5 285 aa13.57□□□□□ -0.24
CCDC57-205ENST00000392346 TRMT1Q9NXH9 659 aaKnown RBP13.57□□□□□ -0.24
CCDC57-205ENST00000392346 COL14A1Q05707 1796 aaKnown RBP13.57□□□□□ -0.24
CCDC57-205ENST00000392346 H3BQV1 296 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 ZNF165P49910 485 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 IFFO2Q5TF58 517 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 KRT27Q7Z3Y8 459 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 FILIP1Q7Z7B0 1213 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 LINS1Q8NG48 757 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 ZNF594Q96JF6 807 aaPredicted RBP13.56□□□□□ -0.24
CCDC57-205ENST00000392346 SPTLC3Q9NUV7 552 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 ZNF609O15014 1411 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 NEURL1BA8MQ27 555 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 HAND2P61296 217 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 TIMM10P62072 90 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 ISM2Q6H9L7 571 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 EGFL6Q8IUX8 553 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 NLRP2Q9NX02 1062 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
CCDC57-205ENST00000392346 RIPOR2Q9Y4F9 1068 aa13.56□□□□□ -0.24
CCDC57-205ENST00000392346 N4BP2Q86UW6 1770 aaPredicted RBP13.56□□□□□ -0.24
CCDC57-205ENST00000392346 ZSCAN31Q96LW9 406 aaPredicted RBP13.56□□□□□ -0.24
CCDC57-205ENST00000392346 GOLIM4O00461 696 aa13.55□□□□□ -0.24
CCDC57-205ENST00000392346 GLI3P10071 1580 aa13.55□□□□□ -0.24
CCDC57-205ENST00000392346 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
CCDC57-205ENST00000392346 CCDC94Q9BW85 323 aaPredicted RBP13.55□□□□□ -0.24
CCDC57-205ENST00000392346 SNRKQ9NRH2 765 aa13.55□□□□□ -0.24
CCDC57-205ENST00000392346 CRYBG1Q9Y4K1 1723 aa13.55□□□□□ -0.24
CCDC57-205ENST00000392346 MED23Q9ULK4 1368 aa13.55□□□□□ -0.24
CCDC57-205ENST00000392346 ONECUT3O60422 494 aaPredicted RBP13.55□□□□□ -0.24
CCDC57-205ENST00000392346 GCKRQ14397 625 aa13.54□□□□□ -0.24
CCDC57-205ENST00000392346 ZBTB9Q96C00 473 aa13.54□□□□□ -0.24
CCDC57-205ENST00000392346 NEK1Q96PY6 1258 aa13.54□□□□□ -0.24
CCDC57-205ENST00000392346 TM6SF1Q9BZW5 370 aa13.54□□□□□ -0.24
CCDC57-205ENST00000392346 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
CCDC57-205ENST00000392346 LETM1O95202 739 aaPredicted RBP13.54□□□□□ -0.24
CCDC57-205ENST00000392346 CLIP2Q9UDT6 1046 aa13.54□□□□□ -0.24
CCDC57-205ENST00000392346 ALDH1L1O75891 902 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 ZNF75DP51815 510 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 PTPN12Q05209 780 aaKnown RBP13.53□□□□□ -0.24
CCDC57-205ENST00000392346 RESTQ13127 1097 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 TNNI3KQ59H18 835 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 ZSCAN25Q6NSZ9 544 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 GTF3C6Q969F1 213 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 FMNL2Q96PY5 1086 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 USP28Q96RU2 1077 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 FPGT-TNNI3KV9GXZ4 949 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 SPATA31A5Q5VU36 1347 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 SPATA31A7Q8IWB4 1347 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 BIN1O00499 593 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 PSMA5P28066 241 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 ERC1Q8IUD2 1116 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 KCNB2Q92953 911 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 DDX21Q9NR30 783 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC57-205ENST00000392346 DENND2AQ9ULE3 1009 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 CTDNEP1O95476 244 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 TMCO4Q5TGY1 634 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 SMAP1Q8IYB5 467 aaPredicted RBP13.53□□□□□ -0.24
CCDC57-205ENST00000392346 STK11IPQ8N1F8 1099 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 PDCL2Q8N4E4 241 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 PRIMPOLQ96LW4 560 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 CLSTN2Q9H4D0 955 aa13.53□□□□□ -0.24
CCDC57-205ENST00000392346 A0A087WZG4 1122 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms