RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 CAVIN1Q6NZI2 390 aaKnown RBP22.72■■□□□ 1.23
ERCC2-203ENST00000391944 ZNF652Q9Y2D9 606 aa22.72■■□□□ 1.23
ERCC2-203ENST00000391944 PDIA4P13667 645 aaKnown RBP22.71■■□□□ 1.23
ERCC2-203ENST00000391944 FGFR2P21802 821 aa22.71■■□□□ 1.23
ERCC2-203ENST00000391944 PUM3Q15397 648 aaKnown RBP22.71■■□□□ 1.23
ERCC2-203ENST00000391944 CLEC4GQ6UXB4 293 aa22.71■■□□□ 1.23
ERCC2-203ENST00000391944 PI16Q6UXB8 463 aa22.71■■□□□ 1.23
ERCC2-203ENST00000391944 STOX1Q6ZVD7 989 aa22.71■■□□□ 1.23
ERCC2-203ENST00000391944 DDX60Q8IY21 1712 aaKnown RBP22.71■■□□□ 1.23
ERCC2-203ENST00000391944 MBD3O95983 291 aa22.71■■□□□ 1.23
ERCC2-203ENST00000391944 LPIN2Q92539 896 aa22.71■■□□□ 1.23
ERCC2-203ENST00000391944 APPBP2Q92624 585 aa22.71■■□□□ 1.23
ERCC2-203ENST00000391944 MYH7P12883 1935 aa22.7■■□□□ 1.23
ERCC2-203ENST00000391944 RTL9Q8NET4 1388 aa22.7■■□□□ 1.23
ERCC2-203ENST00000391944 F13A1P00488 732 aa22.7■■□□□ 1.22
ERCC2-203ENST00000391944 WASHC4Q2M389 1173 aa22.7■■□□□ 1.22
ERCC2-203ENST00000391944 LINC00116Q8NCU8 138 aa22.7■■□□□ 1.22
ERCC2-203ENST00000391944 ZNF445P59923 1031 aa22.7■■□□□ 1.22
ERCC2-203ENST00000391944 CCDC152Q4G0S7 254 aa22.7■■□□□ 1.22
ERCC2-203ENST00000391944 Q6ZUG5 572 aa22.7■■□□□ 1.22
ERCC2-203ENST00000391944 MTMR6Q9Y217 621 aa22.7■■□□□ 1.22
ERCC2-203ENST00000391944 LAMA4Q16363 1823 aa22.7■■□□□ 1.22
ERCC2-203ENST00000391944 TCHHQ07283 1943 aa22.69■■□□□ 1.22
ERCC2-203ENST00000391944 TTF1Q15361 905 aaPredicted RBP22.69■■□□□ 1.22
ERCC2-203ENST00000391944 CCDC102BQ68D86 513 aa22.69■■□□□ 1.22
ERCC2-203ENST00000391944 DHX32Q7L7V1 743 aaKnown RBP22.69■■□□□ 1.22
ERCC2-203ENST00000391944 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.69■■□□□ 1.222e-6■■■■□ 20.6
ERCC2-203ENST00000391944 ATP6V1DQ9Y5K8 247 aa22.69■■□□□ 1.22
ERCC2-203ENST00000391944 BCORQ6W2J9 1755 aa22.69■■□□□ 1.22
ERCC2-203ENST00000391944 UQCRFS1P1P0C7P4 283 aa22.69■■□□□ 1.22
ERCC2-203ENST00000391944 ARID4AP29374 1257 aaPredicted RBP22.69■■□□□ 1.22
ERCC2-203ENST00000391944 ZSCAN23Q3MJ62 389 aa22.69■■□□□ 1.22
ERCC2-203ENST00000391944 FOXD4L6Q3SYB3 417 aaPredicted RBP22.69■■□□□ 1.22
ERCC2-203ENST00000391944 FOXD4L3Q6VB84 417 aaPredicted RBP22.69■■□□□ 1.22
ERCC2-203ENST00000391944 MPHOSPH8Q99549 860 aa22.69■■□□□ 1.22
ERCC2-203ENST00000391944 SEC31BQ9NQW1 1179 aa22.69■■□□□ 1.22
ERCC2-203ENST00000391944 LAMB2P55268 1798 aa22.68■■□□□ 1.22
ERCC2-203ENST00000391944 ZSCAN25Q6NSZ9 544 aa22.68■■□□□ 1.22
ERCC2-203ENST00000391944 HELBQ8NG08 1087 aaPredicted RBP22.68■■□□□ 1.22
ERCC2-203ENST00000391944 PHKA1P46020 1223 aa22.68■■□□□ 1.22
ERCC2-203ENST00000391944 TMEM87AQ8NBN3 555 aa22.68■■□□□ 1.22
ERCC2-203ENST00000391944 CTNNA3Q9UI47 895 aa22.68■■□□□ 1.22
ERCC2-203ENST00000391944 E7EWF7 191 aa22.67■■□□□ 1.22
ERCC2-203ENST00000391944 EXOSC10Q01780 885 aaKnown RBP22.67■■□□□ 1.22
ERCC2-203ENST00000391944 NSFL1CQ9UNZ2 370 aaKnown RBP22.67■■□□□ 1.22
ERCC2-203ENST00000391944 ARAP2Q8WZ64 1704 aa22.67■■□□□ 1.22
ERCC2-203ENST00000391944 SPATA31A6Q5VVP1 1343 aa22.67■■□□□ 1.22
ERCC2-203ENST00000391944 CNTNAP4Q9C0A0 1308 aa22.67■■□□□ 1.22
ERCC2-203ENST00000391944 FOXP2O15409 715 aa22.66■■□□□ 1.22
ERCC2-203ENST00000391944 DTNBO60941 627 aa22.66■■□□□ 1.22
ERCC2-203ENST00000391944 PDCP20941 246 aa22.66■■□□□ 1.22
ERCC2-203ENST00000391944 USP48Q86UV5 1035 aa22.66■■□□□ 1.22
ERCC2-203ENST00000391944 PUS7LQ9H0K6 701 aaKnown RBP22.66■■□□□ 1.22
ERCC2-203ENST00000391944 USP21Q9UK80 565 aa22.66■■□□□ 1.22
ERCC2-203ENST00000391944 RGL2O15211 777 aa22.66■■□□□ 1.22
ERCC2-203ENST00000391944 LARP1BQ659C4 914 aaKnown RBP22.66■■□□□ 1.22
ERCC2-203ENST00000391944 GTF3C6Q969F1 213 aa22.66■■□□□ 1.22
ERCC2-203ENST00000391944 PANK2Q9BZ23 570 aa22.66■■□□□ 1.22
ERCC2-203ENST00000391944 A0A0G2JLW4 131 aa22.65■■□□□ 1.22
ERCC2-203ENST00000391944 SLC5A1P13866 664 aa22.65■■□□□ 1.22
ERCC2-203ENST00000391944 ADD2P35612 726 aa22.65■■□□□ 1.22
ERCC2-203ENST00000391944 AGXT2Q9BYV1 514 aa22.65■■□□□ 1.22
ERCC2-203ENST00000391944 STK3Q13188 491 aa22.65■■□□□ 1.22
ERCC2-203ENST00000391944 TTLL5Q6EMB2 1281 aa22.65■■□□□ 1.22
ERCC2-203ENST00000391944 GDPD2Q9HCC8 539 aa22.65■■□□□ 1.22
ERCC2-203ENST00000391944 IGHMBP2P38935 993 aaKnown RBP22.64■■□□□ 1.22
ERCC2-203ENST00000391944 PTF1AQ7RTS3 328 aa22.64■■□□□ 1.22
ERCC2-203ENST00000391944 BRF1Q92994 677 aa22.64■■□□□ 1.22
ERCC2-203ENST00000391944 PIH1D3Q9NQM4 214 aaKnown RBP22.64■■□□□ 1.22
ERCC2-203ENST00000391944 TMEM63CQ9P1W3 806 aa22.64■■□□□ 1.22
ERCC2-203ENST00000391944 RBM27Q9P2N5 1060 aaKnown RBP22.64■■□□□ 1.22
ERCC2-203ENST00000391944 SLC9C2Q5TAH2 1124 aa22.64■■□□□ 1.21
ERCC2-203ENST00000391944 RC3H1Q5TC82 1133 aaKnown RBP22.64■■□□□ 1.21
ERCC2-203ENST00000391944 GPAA1O43292 621 aa22.63■■□□□ 1.21
ERCC2-203ENST00000391944 FGAP02671 866 aa22.63■■□□□ 1.21
ERCC2-203ENST00000391944 KCNQ4P56696 695 aa22.63■■□□□ 1.21
ERCC2-203ENST00000391944 FGD1P98174 961 aa22.63■■□□□ 1.21
ERCC2-203ENST00000391944 UBE3CQ15386 1083 aa22.63■■□□□ 1.21
ERCC2-203ENST00000391944 LRRC2Q9BYS8 371 aa22.63■■□□□ 1.21
ERCC2-203ENST00000391944 CNPY2Q9Y2B0 182 aa22.63■■□□□ 1.21
ERCC2-203ENST00000391944 VPS37CA5D8V6 355 aaPredicted RBP22.63■■□□□ 1.21
ERCC2-203ENST00000391944 ATRNO75882 1429 aa22.62■■□□□ 1.21
ERCC2-203ENST00000391944 GADD45BO75293 160 aaPredicted RBP22.62■■□□□ 1.21
ERCC2-203ENST00000391944 IMMTQ16891 758 aaKnown RBP22.62■■□□□ 1.21
ERCC2-203ENST00000391944 THSD7AQ9UPZ6 1657 aa22.62■■□□□ 1.21
ERCC2-203ENST00000391944 MYO5AQ9Y4I1 1855 aaKnown RBP22.62■■□□□ 1.21
ERCC2-203ENST00000391944 PFKFB2O60825 505 aa22.61■■□□□ 1.21
ERCC2-203ENST00000391944 FBXL16Q8N461 479 aa22.61■■□□□ 1.21
ERCC2-203ENST00000391944 BTAF1O14981 1849 aa22.61■■□□□ 1.21
ERCC2-203ENST00000391944 IDH1O75874 414 aaKnown RBP22.6■■□□□ 1.21
ERCC2-203ENST00000391944 SPATA5Q8NB90 893 aa22.6■■□□□ 1.21
ERCC2-203ENST00000391944 SNAP23O00161 211 aa22.6■■□□□ 1.21
ERCC2-203ENST00000391944 SF3B3Q15393 1217 aaKnown RBP22.6■■□□□ 1.21
ERCC2-203ENST00000391944 ERFEQ4G0M1 354 aa22.6■■□□□ 1.21
ERCC2-203ENST00000391944 CDC5LQ99459 802 aaKnown RBP22.6■■□□□ 1.21
ERCC2-203ENST00000391944 RPS6KA4O75676 772 aa22.59■■□□□ 1.21
ERCC2-203ENST00000391944 LLPHQ9BRT6 129 aaKnown RBP22.59■■□□□ 1.21
ERCC2-203ENST00000391944 PDE6AP16499 860 aa22.59■■□□□ 1.21
ERCC2-203ENST00000391944 SCRN1Q12765 414 aa22.59■■□□□ 1.21
ERCC2-203ENST00000391944 RASGRF1Q13972 1273 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms