RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PLEKHG1Q9ULL1 1385 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 SPTLC2O15270 562 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 CHMLP26374 656 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 IFI16Q16666 785 aaKnown RBP22.45■■□□□ 1.18
SHANK1-203ENST00000391813 CEP85Q6P2H3 762 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 NCOA7Q8NI08 942 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 KRT86O43790 486 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 ST5P78524 1137 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 NSRP1Q9H0G5 558 aaKnown RBP22.45■■□□□ 1.18
SHANK1-203ENST00000391813 SAMD9LQ8IVG5 1584 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 IFIT3O14879 490 aaKnown RBP22.45■■□□□ 1.18
SHANK1-203ENST00000391813 ZNF75DP51815 510 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 ANKRD13DQ6ZTN6 518 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 SLF2Q8IX21 1173 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 FAM76AQ8TAV0 307 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 ZNF287Q9HBT7 754 aa22.45■■□□□ 1.18
SHANK1-203ENST00000391813 TTC41PQ6P2S7 1318 aa22.44■■□□□ 1.18
SHANK1-203ENST00000391813 MATR3P43243 847 aaKnown RBP eCLIP22.44■■□□□ 1.18
SHANK1-203ENST00000391813 TACC1O75410 805 aa22.44■■□□□ 1.18
SHANK1-203ENST00000391813 AMPD3Q01432 767 aa22.44■■□□□ 1.18
SHANK1-203ENST00000391813 IMPACTQ9P2X3 320 aa22.44■■□□□ 1.18
SHANK1-203ENST00000391813 DNA2P51530 1060 aa22.44■■□□□ 1.18
SHANK1-203ENST00000391813 TRIM21P19474 475 aaKnown RBP22.43■■□□□ 1.18
SHANK1-203ENST00000391813 METAP2P50579 478 aaKnown RBP eCLIP22.43■■□□□ 1.18
SHANK1-203ENST00000391813 ZRANB1Q9UGI0 708 aa22.43■■□□□ 1.18
SHANK1-203ENST00000391813 EFCAB6Q5THR3 1501 aa22.43■■□□□ 1.18
SHANK1-203ENST00000391813 FBLN1P23142 703 aa22.43■■□□□ 1.18
SHANK1-203ENST00000391813 GPTP24298 496 aa22.43■■□□□ 1.18
SHANK1-203ENST00000391813 ELF2Q15723 593 aa22.43■■□□□ 1.18
SHANK1-203ENST00000391813 TMEM63CQ9P1W3 806 aa22.43■■□□□ 1.18
SHANK1-203ENST00000391813 GSTTP1A0A1W2PQM5 241 aa22.43■■□□□ 1.18
SHANK1-203ENST00000391813 VAMP4O75379 141 aa22.43■■□□□ 1.18
SHANK1-203ENST00000391813 ZSCAN29Q8IWY8 852 aaPredicted RBP22.43■■□□□ 1.18
SHANK1-203ENST00000391813 NPHP4O75161 1426 aaPredicted RBP22.43■■□□□ 1.18
SHANK1-203ENST00000391813 IQCA1Q86XH1 822 aa22.43■■□□□ 1.18
SHANK1-203ENST00000391813 COL17A1Q9UMD9 1497 aaPredicted RBP22.43■■□□□ 1.18
SHANK1-203ENST00000391813 DMTNQ08495 405 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 B4GALNT4Q76KP1 1039 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 PHACTR2O75167 634 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 ANKS4BQ8N8V4 417 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 ACSBG1Q96GR2 724 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 NPC1L1Q9UHC9 1359 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 NBPF6Q5VWK0 638 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 NBPF5PQ86XG9 351 aaPredicted RBP22.42■■□□□ 1.18
SHANK1-203ENST00000391813 NBPF4Q96M43 638 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 EYA1Q99502 592 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 SBNO1A3KN83 1393 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 DNAJC21Q5F1R6 531 aaKnown RBP22.42■■□□□ 1.18
SHANK1-203ENST00000391813 MSL1Q68DK7 614 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 ABCF2Q9UG63 623 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 MAP3K2Q9Y2U5 619 aa22.42■■□□□ 1.18
SHANK1-203ENST00000391813 POTEDQ86YR6 584 aa22.41■■□□□ 1.18
SHANK1-203ENST00000391813 PLCD3Q8N3E9 789 aa22.41■■□□□ 1.18
SHANK1-203ENST00000391813 SOS1Q07889 1333 aaPredicted RBP22.41■■□□□ 1.18
SHANK1-203ENST00000391813 ARAP3Q8WWN8 1544 aa22.41■■□□□ 1.18
SHANK1-203ENST00000391813 HECW2Q9P2P5 1572 aa22.41■■□□□ 1.18
SHANK1-203ENST00000391813 A0A1B0GUA9 196 aa22.41■■□□□ 1.18
SHANK1-203ENST00000391813 FAM160A1Q05DH4 1040 aa22.41■■□□□ 1.18
SHANK1-203ENST00000391813 CEP57Q86XR8 500 aa22.41■■□□□ 1.18
SHANK1-203ENST00000391813 UTP14AQ9BVJ6 771 aaKnown RBP22.41■■□□□ 1.18
SHANK1-203ENST00000391813 TMCO5BA8MYB1 307 aa22.41■■□□□ 1.18
SHANK1-203ENST00000391813 ZBTB7BO15156 539 aaPredicted RBP22.41■■□□□ 1.18
SHANK1-203ENST00000391813 MYL5Q02045 173 aa22.41■■□□□ 1.18
SHANK1-203ENST00000391813 SPINK5Q9NQ38 1064 aaPredicted RBP22.41■■□□□ 1.18
SHANK1-203ENST00000391813 MKRN1Q9UHC7 482 aaKnown RBP22.41■■□□□ 1.18
SHANK1-203ENST00000391813 CLSTN2Q9H4D0 955 aa22.4■■□□□ 1.18
SHANK1-203ENST00000391813 CCDC194A0A1B0GVG4 234 aa22.4■■□□□ 1.18
SHANK1-203ENST00000391813 FAM83GA6ND36 823 aa22.4■■□□□ 1.18
SHANK1-203ENST00000391813 RAD50Q92878 1312 aa22.4■■□□□ 1.18
SHANK1-203ENST00000391813 VAV2P52735 878 aa22.4■■□□□ 1.18
SHANK1-203ENST00000391813 MAP3K12Q12852 859 aa22.4■■□□□ 1.18
SHANK1-203ENST00000391813 CCDC155Q8N6L0 562 aa22.4■■□□□ 1.18
SHANK1-203ENST00000391813 SETDB2Q96T68 719 aa22.4■■□□□ 1.18
SHANK1-203ENST00000391813 BAG1Q99933 345 aaPredicted RBP22.4■■□□□ 1.18
SHANK1-203ENST00000391813 KIF5AQ12840 1032 aa22.39■■□□□ 1.18
SHANK1-203ENST00000391813 C17orf53Q8N3J3 647 aaPredicted RBP22.39■■□□□ 1.18
SHANK1-203ENST00000391813 TCEANC2Q96MN5 208 aa22.39■■□□□ 1.18
SHANK1-203ENST00000391813 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.39■■□□□ 1.18
SHANK1-203ENST00000391813 ADGBQ8N7X0 1667 aa22.39■■□□□ 1.18
SHANK1-203ENST00000391813 PI4KAP2A4QPH2 592 aa22.39■■□□□ 1.18
SHANK1-203ENST00000391813 BRD1O95696 1058 aa22.39■■□□□ 1.18
SHANK1-203ENST00000391813 UBA7P41226 1012 aa22.39■■□□□ 1.18
SHANK1-203ENST00000391813 ZNF569Q5MCW4 686 aa22.39■■□□□ 1.18
SHANK1-203ENST00000391813 BRAPQ7Z569 592 aa22.39■■□□□ 1.18
SHANK1-203ENST00000391813 PI4KAP1Q8N8J0 262 aa22.39■■□□□ 1.18
SHANK1-203ENST00000391813 CCDC114Q96M63 670 aa22.39■■□□□ 1.18
SHANK1-203ENST00000391813 TCP11L1Q9NUJ3 509 aa22.39■■□□□ 1.18
SHANK1-203ENST00000391813 IBTKQ9P2D0 1353 aaPredicted RBP22.39■■□□□ 1.17
SHANK1-203ENST00000391813 KLF18A0A0U1RQI7 1052 aa22.39■■□□□ 1.17
SHANK1-203ENST00000391813 RUFY3Q7L099 469 aa22.39■■□□□ 1.17
SHANK1-203ENST00000391813 CNGA4Q8IV77 575 aa22.39■■□□□ 1.17
SHANK1-203ENST00000391813 TRIM47Q96LD4 638 aa22.39■■□□□ 1.17
SHANK1-203ENST00000391813 PUF60Q9UHX1 559 aaKnown RBP22.39■■□□□ 1.17
SHANK1-203ENST00000391813 Q6ZUG5 572 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 AFAP1L1Q8TED9 768 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 MAP3K5Q99683 1374 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 CCDC96Q2M329 555 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 TMEM266Q2M3C6 531 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 CBX8Q9HC52 389 aa22.38■■□□□ 1.17
SHANK1-203ENST00000391813 RTCBQ9Y3I0 505 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms